Array 1 328870-329456 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KK082668.1 Prevotella sp. HJM029 scaf000089, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                  	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	=================================================	============================	==================
    328870	    49	  93.9	    28	..............................................CCA	ATGCGCACATCATTAGCGGCTATTGTGG	
    328947	    49	  95.9	    28	..............................................C.C	AAAAACGAGATTTTCGACGGTTGCACCG	
    329024	    49	  93.9	    28	..............................................CTT	TACCGCGCTCATAAACCTTATCAGCAGC	
    329101	    49	  95.9	    28	..............................................C.A	GCAACAAAGATTATGAGTAAAAAAACTA	
    329178	    49	 100.0	    28	.................................................	GTGCAGTTATTAATCGTGTCCTTCAAAC	
    329255	    49	 100.0	    27	.................................................	GATATTGCAGAAATGATTGAAACATTG 	
    329331	    49	  98.0	    28	................................................T	AGATTGCTGATTACCACTATTCACCTGG	
    329408	    49	  98.0	     0	...............................................T.	|                           	
==========	======	======	======	=================================================	============================	==================
         8	    49	  97.0	    28	GTTGTGATTTGCTTAAAAATATCTATCTTTGTGGTAGCAACAACAATAG	                            	       

# Left flank :   ATATGAGGGCGTTAGTGCGCGCAAGAATTTTGCTCACCATTATTCTTTGGATTACATTCCCTTCATTCCTTATTATCCCTTTCTTTGAACTAACAGCTTTCCGGTTTGTTGTTGGTGTAGCCTTGTTACTCATTAGCTTTTTTATTTTTCTCTTACGAAGCTCGATAAAGGCGGAACTTAGATTAATGATAGCAGAGGAAACTGGGGACTACCCTTGGTGGTATGCGCCAAACACACCATGGTGGATGGGTGGGTTATAATACATTTGCAATGCTCTCTGAGAACTTCTTTTCCATTTTCCTTTTTCCGCAACTGAGCTTTGTTTTCTCTGGCCTCTCATGTTAAGAGTCTATCTAAGTATAGATAATCCTTCGCGTGATGGGTATAATGATGAGAGTGTGGCATCAGTGGTGTACGCTCCAGTTGTCTTTTGTAATTCTTTCTCTCGTCCCATGGTGTAATAATTACATTTATCTCGTAGATATAGAAGAACGAGAACT
# Right flank :  GATTCTTTGTAATTTATTGTTTATCAAAAGGATATAAGGTTGTTGAAGAAAATAAAAAATGGTACCACAAAACGAAATCCCACTTCATTGAAGTGGGATTTTTGTTTTCTATTAAGGTAACTTCTTATGAAGCCTTCTTTCCATATTTCTTGGTTGCATGGTAGATTGTTCGTAAGCGATAAAAATATTTTTTCTTTTTTAACAGAGCTTTTTTATCGGGAGATGGATAGCTTTTATCTTTGCCATCCTACGTCCTTTAGAATAATTCCAATTGTTGTCCGGGTGCGTTAGGCGCTTTAGGTTTCTCGCCAAAGAAAAGACGAATGTTGGCAAACTGTTTATCGGTGATGCATAACATTCCCACCATTCCATGTTGGGGAAGGCTGACTTGCACGCGCTTCATGTGCACTTCTGCATTTTCTATACTTGCACAGTGGCGAATATAGATAGAGAATTGGAACATGGTAAAACCATCTTTTATCAGCATTTTCCGAAAATCC

# Questionable array : NO	 Score: 4.81
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:-0.5, 7:-0.01, 8:1, 9:0.47,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGCTTAAAAATATCTATCTTTGTGGTAGCAACAACAATAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.57%AT]
# 	Reference repeat match prediction:         F [matched GTTGTGATTTGCTTGAAAATATGTACCTTTGTGGTAGCAACAACAACTT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.50,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.27   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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