Array 1 461501-462992 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCXS02000002.1 Salmonella enterica subsp. enterica serovar Anatum strain HIY0051 NODE_2_length_524771_cov_28.254449, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 461501 29 100.0 32 ............................. AACTGAAACCAGGCCAGGTGATATTTATCAAA 461562 29 100.0 32 ............................. CCGAGTGTGAGCAGGCTATTTATGATGAGCGC 461623 29 100.0 32 ............................. GGCTCCGAATGTGAAGAATCCGACGCTATTGA 461684 29 100.0 32 ............................. GCCAGCGCGCCTGCGGCAGCACCGGCAGCAAT 461745 29 100.0 32 ............................. CGCATTATTAATGGCGTTGATGTTCTGGCGGG 461806 29 100.0 32 ............................. GTAATCAATCTCATATAGAGCGGGGGGGGGAT 461867 29 100.0 32 ............................. CGCGAGCAATCCCATCTGACGTTCCGGAGACA 461928 29 100.0 32 ............................. GTCATCGTTATACACGTGACGGTTTTAATAGT 461989 29 100.0 32 ............................. AAAATGAACAGCCACACATCCGCCAATAAAAA 462050 29 100.0 32 ............................. GCTGTCGGTCGCAGTGTGGATATTGCGATCAA 462111 29 100.0 32 ............................. GGGCTGAACGGCGATCTGATTACGTGGAGTAA 462172 29 100.0 32 ............................. TACGCCAGCTATAAGGGGTACACGAACAGCTT 462233 29 100.0 32 ............................. GCCCGAGAAAAGTTGCTTCTCTTTGCTGCTGC 462294 29 100.0 32 ............................. CATACCCTGTAGTTTCAATTTCCGCAGGTGGG 462355 29 100.0 32 ............................. AGCGCGGAATGATTTTTAACGCTGAGATGGTG 462416 29 100.0 32 ............................. TACCGCGACACCGTCAACGACAGCAACCACTT 462477 29 100.0 32 ............................. CAGGTCACTAAAATTTGTAGGGTTATCCACAG 462538 29 100.0 32 ............................. GCGCAATTGCAGTTTGACGCGGTGCTGTCATT 462599 29 100.0 32 ............................. TGTCTTAACTCCATTGCTGAGTCGATTGTGAA 462660 29 100.0 32 ............................. CACACAGAACGCCAGTTATAATCATCGGTGCT 462721 29 100.0 32 ............................. TCGTTTGTGGCGTCAGTAATACTATTATCGGT 462782 29 96.6 32 .............T............... TTTTTAAATCCGGACAGACCCTGTAACGGATC 462843 29 100.0 32 ............................. ATCCGACTGTATGCCCAGCAGAACGAGGGCGC 462904 29 96.6 32 .............T............... CACGAGTGGCAAATTGATTTCGACGAAAAACC 462965 28 82.8 0 ...............A.AA....-.G... | ========== ====== ====== ====== ============================= ================================ ================== 25 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GAAATCAAGCATCCCGTTGGGCGAGTTCGTGATATTGAGGCGCTGGATGAACTGTTAGCCACGTTGAGCGATGATAAACCGCGCGTGATTGCTTTGCAGCCCATTAGCCAGAAAGAAGACGCGACGCGTCTGTGTATTGAAACTTGTATTGCACGTAACTGGCGGCTGTCTATGCAAACGCATAAATATTTAAATATCGCCTGATGCATTACTAATCTTACGGACGGCCTGCCGATGCCGTCTGTGACTTATCCATTACCTTGCATTGTTTATTTTCTCTATGTGAATTTCGATGAGTGTATAAAAGCGCGGATAAATTTTTCCATAGCGATGCATGGATCACGCTATTTTGGTAAATTTAAAGAAAAAATCATTCTATGAACTTTTTTGCATCAAAATCAGCAAATTAGCTGTTCTTTAATAATTTAAATTGTTGCGATTATGTTGGTGGAATGTAGTGCTGATAAAAAGTAGTTTATAAACAATGATATCCGTTTAGT # Right flank : GTTGCATAATCATAATCTGTGTACCAGTAATGGCAGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTCCCGGGGAGGCTTTTAGACAGGAGAAGGCCATGGCGTTAAGGATCAGGGTATTGCTCGAAAATCATAAGGGAGCTGGAGCGGATAAATCGTTGAAGGCCCGGCCAGGATTAAGCCTGTTGGTCGAGGATGAGTCTACGTCGATCTTGTTCGATACCGGCCCTGATGGCAGTTTTATGCAAAACGCGTTGGCGATGGGGATCGATCTGTCCGATGTGTCTGCTGTGGTGCTTTCGCATGGTCATTACGATCATTGCGGCGGCGTGCCGTGGCTTCCTGATAACAGTCGAATCATCTGCCATCCCGATATTGCGCGCGAACGTTATGCGGCAATGACTTTTCTCGGTATTACCCGAAAAATAAAAAAATTGTCGTGTGAGGTGGACTATTCACGCTACCGAATGATGTACACGCGTGGACCCCTGCCGATTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //