Array 1 3941-168 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPUD01000008.1 Prevotella sp. R6014 strain NITE P-03463 sequence08, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 3940 36 100.0 29 .................................... CTTATTTATCTTATTTGCTACCACAAAGG 3875 36 100.0 30 .................................... AGTGCATAGAGCAGCCAAGGAGATGAGCAG 3809 36 100.0 30 .................................... ACATCCCGCCTCTTTTGCAGACGGCTATCC 3743 36 100.0 30 .................................... GTGATGAACTGGTCCCAGTTGTGCCAAAGT 3677 36 100.0 30 .................................... AGTGCATAGAGCAGCCAAGGAGATGAGAAT 3611 36 100.0 30 .................................... TGACCGACAGAGTTCAAGAATGGGCCATAG 3545 36 100.0 30 .................................... GAAGTTCGTACACAGAAAGCCCTGACCTCT 3479 36 100.0 29 .................................... CGCAGGATGCTCATATAGCTCAGACCTGG 3414 36 100.0 29 .................................... GACAAACTCAAAGATGATGGTGCGCTATG 3349 36 100.0 30 .................................... GCTGCCATCGTGAACTCGATGCCCTCCAAA 3283 36 100.0 29 .................................... GCAAGAGAGCCGAAGAAATCAACAGGCAG 3218 36 100.0 30 .................................... GACAAAGCGCATTTCTATACTCAGAAGAAA 3152 36 100.0 30 .................................... TGAACGATGTCTCTTGCGAGCCGTTCCTGA 3086 36 100.0 30 .................................... ACTATCTTCGATGCTTTCACTTGGCTCTTA 3020 36 100.0 30 .................................... TCATGGACGGTGAGGTAAAGCACGACCATG 2954 36 100.0 29 .................................... TATACAGCCACAGCAAGCGGCACCATCGC 2889 36 100.0 30 .................................... GCAAGCATCACGGTATCATCGCAATACCTG 2823 36 100.0 29 .................................... CCAGCGGTTTTATACTAAATACAGTAAAC 2758 36 100.0 30 .................................... GGTTATCTCAAACTCAACACAGCCAGCACG 2692 36 100.0 29 .................................... AATCTGAATTTCGCGTCGTTCGAGAAACG 2627 36 100.0 30 .................................... GGGATATATCACCAAGATAGAGACATTCAA 2561 36 100.0 29 .................................... AGGCTTCGAGAATGGTCTCTATGCTCGTG 2496 36 100.0 29 .................................... TCCATCGCAATACATAGCATCATAACCGA 2431 36 100.0 29 .................................... GCTTGCTCTTGCGTGTGTCATGCCATGCA 2366 36 100.0 30 .................................... TGATAAAACGCTTTTTGAACAAGGAAAGGT 2300 36 100.0 30 .................................... CACACACCGAAGATGCAAAGTACCTCCGTC 2234 36 100.0 30 .................................... GAGAACGACTGGCAGCGGCTCGCACAGTTC 2168 36 100.0 29 .................................... TAACTACTATGATAGTGGCAACCTCATGC 2103 36 100.0 29 .................................... CGTCCGCAACCATCCCAAAAACTATTCGG 2038 36 100.0 29 .................................... TGGCCTTCGAGGCCTTCTCGGCCTGTGCG 1973 36 100.0 29 .................................... CTTCGATTTCTCGTTGTTCAGATTGTACT 1908 36 100.0 30 .................................... CCAACGTGGTAACCCTGACCTATTAGGATG 1842 36 100.0 30 .................................... CAAGAGCACGAACGTCTGAAATGGTCGACA 1776 36 100.0 30 .................................... TTTTCGTTCAATGCTACTTTGAACAAGTCG 1710 36 100.0 29 .................................... GTGGCAGTGCTAACATTCCTAAAGTATTA 1645 36 100.0 30 .................................... CGTAATAAGGGAAACGAGGAGTGCAAAATG 1579 36 100.0 29 .................................... CTGGAGGCTATCTATAAGAGCGCCGACCC 1514 36 100.0 30 .................................... CGTGATGAATTTACTTACAACGGGGTTTGG 1448 36 100.0 30 .................................... GTTTGCCAAGCTATTAGGCGTCAGTCCTCA 1382 36 100.0 30 .................................... TTTGGACTCTCTTTGCAATTCCCTAATATG 1316 36 100.0 29 .................................... TCGATACTGAATCGACTACGACTCGCAAA 1251 36 100.0 30 .................................... GGGCAGCGTCGACGTTGATGCTGTATGTGA 1185 36 100.0 29 .................................... TTTATGTTTAATTCTTCTATTGATAGATA 1120 36 100.0 30 .................................... TTTAATTTAAAAATAAAGAGCATAAATTGT 1054 36 100.0 29 .................................... CCGCAATGAGGTCACCGGCAAAAAAACGA 989 36 100.0 29 .................................... GCTTTCCAGATGAAGAGTAACGGCAGTAG 924 36 100.0 29 .................................... ACTAATTGTTATATGCTTGCAAGTATCAA 859 36 100.0 30 .................................... AGTGTTCAGCACCATTGCGGTCACATCCTT 793 36 100.0 29 .................................... CAGAAATTCTTTCATTGCCGTTTGATTTA 728 36 100.0 30 .................................... GCGGCAGCCTTTCGGGGTTGGGCAGGGCGA 662 36 100.0 30 .................................... GCAGCGTCTTGTCCACCGCTCCATTGATAT 596 36 100.0 29 .................................... ATATTTATTGTGACCCGCATGGGGTAATG 531 36 100.0 30 .................................... TAGAAGGGGCGCAATATCTCCTTATCGCTG 465 36 100.0 29 .................................... TCGTAATGATACGAATGAACTACACCGAC 400 36 100.0 30 .................................... CAAGATGCCAAAGGCCCGACAATTCAAGCA 334 36 100.0 30 .................................... GATGGCATGCCGGGTCATCCACGCATCCAT 268 36 100.0 29 .................................... TCGCCGATAACGCCTATGCGCTGCTGTTC 203 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 58 36 100.0 30 GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Left flank : AAATTCTATAAAGGTGAAACAAAAAAGCTTTCCTTGCCAGTTCTTATATGACTTTTAACCGACTTAATGCATATCATATCATGTGGCTGTTCGTATTCTTCGACTTGCCTGTGACTACAAAGAAAGAACGCCACGACGCAGCACTCTTCCGTAAGAACCTGGAGAAAGATGGCTTCTCCATGATGCAATTTTCTGTTTATATCAGGCATTGCGGTTCCTATGAGAGTATGGATGTTCACGTCAAAAGGGTAAAAAGCCTTATACCAAAATATGGGGCCGTAAGTATTCTCTCGGTTACAGACAAGCAATACAGTAATATATATAACTTCCGTGGAGTACCTAAAAATCAGAAACTAAAAAAAGAAATAAAACATATCAGCGAACCGATACAATTAGAACTTTTTTAGTATCTTTGCACTGGAAATAGACCTACACTTCCGTTTTTTTTATCTCTCCAATGGCCTTGAATCTCTTTATTTAAGGGCAATTTAGAGAATAAG # Right flank : CTCTGCACTGCCCAGTCACTCTATGAGCGAGTTGCGGTTTGATTAAAGAAACCTCCATTTGAGACACTATACAATTTGGCCCTTGCTTTGCCGTTTCTGGCTTAGCAAGGGCTTTCTTTCGTAGAAAGCCCGTTTAAACTTCCCCTTGTTTTAGTCTCTGCATAATTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 34628-38417 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPUD01000008.1 Prevotella sp. R6014 strain NITE P-03463 sequence08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 34628 32 100.0 34 ................................ TGTCATGAATACCTTTTCGCCACGTTTCAATCGG 34694 32 100.0 33 ................................ ATTTATGTCAAAAAACAACATCCCGCCTCTTTT 34759 32 100.0 32 ................................ TATCGGTCAGCCCTCTGTTGGTTCATATCAAT 34823 32 100.0 35 ................................ CGACTATTTCAATCCGTTATATCAGCGACTTGGAC 34890 32 100.0 34 ................................ GTATTCTCTTGATGACCTCGGCACGTCCGCACCT 34956 32 100.0 34 ................................ CGGGACACCTATCATATTAATGTCGACGCAGCCC 35022 32 100.0 34 ................................ TTGATGATCTCGGAGGTAACGCACTTGTCGGTGC 35088 32 100.0 32 ................................ TGCTGCCGTTGCATCATATGTTAGTAGCTACG 35152 32 100.0 34 ................................ CTTTTTGACGACCCGAACCTTTGTACGTCATTGT 35218 32 100.0 34 ................................ CGAAGAACCCTGCTACTGGTGTTCGTGATGACCT 35284 32 100.0 34 ................................ ATGATACGTATCACGTTAATGTCGATGCAGCCCA 35350 32 100.0 35 ................................ TTCACCGTGGCTTATGTAAGTCCGTTGAAAGTGGT 35417 32 100.0 34 ................................ CTATGTAGCTGTGATAGTCCTGACTCTGTGTCTA 35483 32 100.0 34 ................................ TAATCACTGGTTGCCTACCGTTCATACTTTCAAA 35549 32 100.0 34 ................................ TCCCCGTCCGTTTTATCGGGCTTATGGGCGTGGT 35615 32 100.0 34 ................................ CTCCTGCGTCAAGAAGGCATTATCCCGGTGGTCC 35681 32 100.0 35 ................................ CAACAGTGAAGTGAGTAATCTAATAGGCACGAATG 35748 32 100.0 34 ................................ AACATTTCCACCTCTGCCAGTCCACTGGCTTCAC 35814 32 100.0 33 ................................ ACGCTGTCAAAGAGATTATTAATACGTTTCACA 35879 32 100.0 34 ................................ AGCGAAGCAGGACATATTACAAGCACTGGCCACG 35945 32 100.0 35 ................................ TTAGCCAGTTCGAAGCAGGCATTGCGTGCGTAGAT 36012 32 100.0 35 ................................ AGGATAACGGATATTGTCGATTAAGTGAGTATAAT 36079 32 100.0 34 ................................ ACTACGTGCTGTCGATGCAATTTGTTGAGCGCAT 36145 32 100.0 33 ................................ AAGGGAACAGAAAAGACCGTTGCCGACTTGTCC 36210 32 100.0 35 ................................ AGTCCACACCTATTTTGTCACATAGACCCCCCAAA 36277 32 100.0 34 ................................ TACGCTGCGCTGCGCTTGCGTCCTCAGCCACTAA 36343 32 100.0 35 ................................ TTTGCTAAATAGTTTTGGTATATACTTAAATTATA 36410 32 100.0 34 ................................ AATTCGAATTTAAGATTGTTCTCAGCCATAAAGT 36476 32 100.0 34 ................................ CTCTATCAGCGGCTCCATACGTCCCGCCGCCCAG 36542 32 100.0 34 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGTG 36608 32 100.0 33 ................................ TGACAGAGCTGCAGAGGCCATCGAGAATCACAT 36673 32 100.0 34 ................................ ACTCCTTGCTGGTCTTGATACTCTCCATAATGGA 36739 32 100.0 34 ................................ CTGTGTGCTCTGTCCTCTGCCTGGCAACAATCAG 36805 32 100.0 34 ................................ TTCCTGGGCCTCGGCTATTTCCTGCTTCTTCACA 36871 32 100.0 35 ................................ CGGATAATTGGGATAGCCGTAGCCAACACCCCAAC 36938 32 100.0 34 ................................ CGCATCCGGCTGGAGGCTATCGAACTCTACGAAT 37004 32 100.0 34 ................................ AGTAGCTCAACTGGATAGAGCAACTGCCTTCTAA 37070 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 37136 32 100.0 34 ................................ ACAAAGGAACGTAGTTTAACGAAGAAAGACTGCG 37202 32 100.0 34 ................................ ATTAATACGTATAATTATGATTACAACTAATGAC 37268 32 100.0 34 ................................ AACTTAGAGCTGTCTACGCTTGTGCGTGTAGTCG 37334 32 100.0 34 ................................ CTTAATATGGCTTGATTTGTTAGCACCTCCGCAG 37400 32 100.0 32 ................................ AATTATCTAAAGATTATGCGCCGACATGCTGA 37464 32 100.0 33 ................................ TTAAACTCACGTCTCCAGTTCTCTTTCAGCGAA 37529 32 100.0 33 ................................ CCTTTAGTATGCGTAGTAAGTAACCTTGATACC 37594 32 100.0 33 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGT 37659 32 100.0 35 ................................ TTTTCCTCTGCGTCTATATAAGACTGCATCGTATC 37726 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 37792 32 100.0 33 ................................ ATAAAGGAACGCTACACAGGCAAGGACAAGGAC 37857 32 100.0 33 ................................ ATGTCAGACATGCAGCAGACATAACGAGAGGGG 37922 32 100.0 33 ................................ TTGTTTCTCCGTTAATTACGACGGTTCACTTCT 37987 32 100.0 34 ................................ CGCCATAGGAACTTGACTTAATTTTTTGGAAAGA 38053 32 100.0 36 ................................ AAAAGGTCAAGACCATAGTTACGATACCGAGGTTGT 38121 32 100.0 32 ................................ TGTACTGAATCTTCTAATTGGTCACAAGTGGC 38185 32 96.9 36 ........T....................... TGCGTCAACTAAGATTCTCTACCCCCGAGCGGAGAC 38253 32 100.0 34 ................................ AAATCACGGAACGCACCCACCTTTAGGTTTGGCA 38319 32 100.0 35 ................................ CTCGACCTTCCTGTGTGTTTCCTTTGGCTCGTACA 38386 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 58 32 99.9 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ATATGTTCGTACTGGTTACTTATGATGTGAATATCACATCGCCTTTAGGACAAAACCGACTCAGACAGGTTGCTAAAACATGTCTTAACTACGGAAAGCGCGTTCAAAATTCTGTATTCGAATGCGTCCTGACTGAAGCTCAATTTGTACTGCTAAAGGATAAGCTGTCTGAAATAATAAGTCAATCGGATGACAGCATTTGTTTCTATAAATTAGGTAACAATTGGAAAAGACATGTAGAAAGAATCGGCAAGGACACGTCAGTCGATGTGACTGACGTCTTAATATTATAATGCACTTCACCCATACTTACTCTCAGAATGATTTCGTTTATGCGAACCCTAACCGTTGCACTAAAAGCAGGAATTTTCGCAGAGACTAATACACAGGCAGTTAAGCTTTTTGAAAGGACAATATGCATTTAAATAGCTATGCTTTTCGCCATGTTCGCAAAATATAGTAACTTTGCCTCTGATTATTAGGCAATTGTCTAATAAGCG # Right flank : CAGCCCCTCTATATGTATGAACTTAACCCAACTTTGACATCGTATTTTGCTTAGTTGTTCTGTATCAGCAATTTAGTGTTTTTAAAAAGTCCTACTGTGTTCTACAGATTTTTATTTTTTTAAATGGCACTTTACTGATTTTCAACAACTCGTAGATTTCAGCTGCACTATCTGTAGGCACACTGCACAGTCTGGTCTCGACAGCCTCTCCAAGCGCATTTACTGCTGTGGTAGTAACTGCTTTTTGAGTCTTCATGATCCGCATGATCTCCGACCAGTACGGTGTCGAACGCTCCCGCCCATGCTCATCCTTGCCTTGCTTTCGCCGGGCAACCTTCATCTGATGGCGCACGGTGTTTACTATCCAGTAAGCCAGCAGCCCTAAGAAAAGGTGTGCGTCTGCCCTATTGTCAGTCTGGTGGTATATGGGCCTGAGGCTGAGGTCGGTTTTGAGCTGCCGGTTGGAGCATTCTATTTCACGTATAAGATTATAGTAGTTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 40554-42359 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPUD01000008.1 Prevotella sp. R6014 strain NITE P-03463 sequence08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 40554 32 100.0 33 ................................ ACGTTGGTAATTTCGTTGACGATACCGTTGGAT 40619 32 100.0 34 ................................ CGTGATACCTATCATATCAATGTCGACGCAGCTC 40685 32 100.0 35 ................................ CCTTAATTTAACGTTATGAAACAGATTGATTATAA 40752 32 100.0 35 ................................ TACAGTTGCTAATTCTATATTCGCAGGTCTGCAGA 40819 32 100.0 34 ................................ TTGCAAACAATCATCTCGCAACCGTACATCCTCC 40885 32 100.0 33 ................................ CTCAGTCTTTAAGATAGATTCTATTGAGCGAGT 40950 32 100.0 33 ................................ CGTGACTTTGTCTATGATTGCTGGTCGTTGCGA 41015 32 100.0 33 ................................ TCATTCCGCAATGTCGACTTTACCAATTTTACA 41080 32 100.0 33 ................................ ATAGTTCAGATGAACGACTATCGTTCATCGCTA 41145 32 100.0 35 ................................ TCAATTCTATCGGTCAGCCAAGTGTTGGTACTTAT 41212 32 100.0 33 ................................ CGACTATTTTAACCCGCTCTATCAGCGACTCGG 41277 32 100.0 33 ................................ TCAATCTCACTCTGGTTATCGTTCTACCCCCCT 41342 32 100.0 35 ................................ TTTACCTGATTATGCTGTAAACCTTTTTCGGCTTG 41409 32 100.0 34 ................................ AGACTCGAGAAGAAATCAAGAACGTTGCTGAAGA 41475 32 100.0 35 ................................ TAATCTTCCTTACATACTTACGCTCCGTCCGTGGC 41542 32 100.0 35 ................................ AGATTCCAAAGGCGCATTTGTTTCTTCTGCCTTTC 41609 32 100.0 33 ................................ GTACTAAACGAGATGATTTTAGCGTTCGTGTAT 41674 32 100.0 33 ................................ TGCAGTCTTGTGGAAAGTATCGCCATAATGACC 41739 32 100.0 32 ................................ AATCTTCGCAGGACTGCAGACACGAGAGCAAA 41803 32 100.0 33 ................................ CCTGTCCTTTAACGACAACAAAAAGCGGTGCAA 41868 32 100.0 36 ................................ AGACCTCAATAATGTTTGCATTATGACGCAGTGGCC 41936 32 100.0 34 ................................ TGCAAAGCGAGCGTCAGGATTTCGGAACTTACGA 42002 32 100.0 34 ................................ TACCATCAACAACAGCTATTTTGTGAATCATAAA 42068 32 100.0 33 ................................ AACCGTCTCAAAGCATCCACAAATCTCCCTACG 42133 32 100.0 32 ................................ ATTTTTCAGACAAAAGTGCCTACCTTTGCAGC 42197 32 100.0 33 ................................ TTGTCCGAGTCGCTAAATTGTCCGGGCTTGCCA 42262 32 100.0 34 ................................ TTTTCCGCAAAGATAGTCTATATCATGTGTTGTG 42328 32 93.8 0 ....................A........G.. | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 99.8 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ACATCTATCCGTTTCCTGGCCTTGGACTTGCTTCTCTCGTAGGCGTTGCCCACAATATCAAGTTTTTCCTCCTCGACAAGTCTGGCCCAGTACGCATGCACTCTGTCACGAACCACTTCCGAGTAACCTTGCAGTTTCTCATCCCAAAGTTGGACATCCTTCTGGTGATTGTACAGATACGTCAGTCCACGCGCAACATCTCTTATCTGCTCTGGGGATAGGTCATGTATAAACCCGACATTGAGCAATATCAAAGTACATACCCTACCGCTGGCATCGCGATAGGACTCCTTCAGACGGTAATACTTCTCGTCTTTACACGTCTGTGGGTTGTAACGTATTTGGGACGTAAAATTCATGCCGCAAAGATAAGCAATCCCTACGACATTGCTGTGTTCTACATTGCGATTTTGAGCAGTTTGACCACGCAAACCCCTATAAACACTGGAAAAAATTCTGAAAAAAAACATTAGAGCGTCAAACTTGGGTTAACACTAATT # Right flank : CCACCTGCACTCAGATTCTTGAAAGATAGAAGATTTTGTATGTGCGTGCAGAATACTATAGGAATCCCTCGCACAAGCCTCAAGGCTGCAAGGAACAGGCAAATCCTTTGCGGAATCTTTGCGACCTTTGCGACTTGGCGAGATTTTTTCGGAGCAAGAGGATGGGGATATAACAAATCTTTGCAACCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGGGATTTTTCGTGGTAAGGGAATGGGGATAGAACGAATCTTTGCGACCTCTGCGACTTGGCGGGATTTTTCGAGGCAAGGGGATGAGGATAGAACAAATCTTAGCGAGCGTGGAGCTTGGCGAGGGGGCTTTCGTGGCTGGAGGACGGTGATAGACGCAGTGAAAGGGTATTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //