Array 1 261316-265084 **** Predicted by CRISPRDetect 2.4 *** >NZ_QCXY01000003.1 Negadavirga sp. SW125 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================================= ================== 261316 37 100.0 35 ..................................... CTGTGGTGAATTGATTATCAAATGTTTTCTCGATG 261388 37 100.0 37 ..................................... TCATCAGGGGCAGCACGAAGAAGCAGATGGCAATCAT 261462 37 100.0 37 ..................................... CCGGTTTTTCATCAACCTATCCACTTTCTTCTTTGAT 261536 37 100.0 35 ..................................... CGCACAGACTTCTTCCTTGAGTTCCTCGCCGGTCC 261608 37 100.0 36 ..................................... AGCTTTTCATTTGTCTTTTTGGTTTATAAGTTCTTG 261681 37 100.0 35 ..................................... GATCGGCAGGGTGTCCGGACGTTGCCGCAGCTCCT 261753 37 100.0 35 ..................................... CGGCGACGAGGTCGGCCTTGGTGAACTTGCGGACG 261825 37 100.0 37 ..................................... ATCTGCAATAACAATGCAGGAAGTACTTCACATCCGT 261899 37 100.0 37 ..................................... GGGATGGGTCCGAGGCGGAGTAGACGGAAAAGCCCCT 261973 37 100.0 35 ..................................... ATTCATGAACTGATTCTTTCGTCTTACTTTTAATG 262045 37 100.0 35 ..................................... TTCGGTGAGCTGCTCCTCCCACTTGTAGCCTAAGT 262117 37 100.0 35 ..................................... GGCAGCACGAGAAAGCACAATGCAAGCATGAAGCT 262189 37 100.0 38 ..................................... CTTGCTGTTGATGTACCCCTGAGAGGCCGCGCGGTACT 262264 37 100.0 38 ..................................... AAGATAAAGATGGAAATTTAGAAGTTAAGCAAAATACA 262339 37 100.0 36 ..................................... TCCCCGTCAACAGTGTGGGGCCGTAAAAAGCCCGGC 262412 37 100.0 36 ..................................... AGAATGTTTCTTGGTTCATGATGCTTACAGGTGTTT 262485 37 100.0 36 ..................................... CCCCAATGATATCCCCTTTTTCCTTTCCGACTAAAA 262558 37 100.0 36 ..................................... ATAAATCTATATCCCCATTAAGAAATAAGTTTAAAT 262631 37 100.0 36 ..................................... AAGTTCCAAAGCTGCTCTTTGTTTGAATTGTCCCAG 262704 37 100.0 34 ..................................... TGAGTCATCTTGAAGGAACTGTACCAGGATGGTG 262775 37 100.0 37 ..................................... CAATAGTGCCATTCTTAAATTATCTAATTCTTCCGGT 262849 37 100.0 36 ..................................... TTCATCTTTGTAGTTTTTTAAGTATGTAATATAGTT 262922 37 100.0 35 ..................................... ATTCATGAACTGATTCTTTCGTCTTACTTTTAATG 262994 37 100.0 36 ..................................... CTTGGTATATGATACCCTTAACTCTTTACCTAAACC 263067 37 100.0 35 ..................................... CGAAATCGACCAGGCTGTAGGAATAGAATGTCATC 263139 37 100.0 38 ..................................... ATGATATAAGTTTAAGTGTGTGATTAATTTTGGTGACG 263214 37 100.0 36 ..................................... TTATAATGTTATTTATTTAAATACCAAGCTATAATA 263287 37 100.0 35 ..................................... GCTGTTTCTTTTGCTTCTTCACTAAGTTCATTGAA 263359 37 100.0 35 ..................................... TATGCTTCCATAACCATTGTGCCATGTAAGCGGAT 263431 37 100.0 35 ..................................... CATGTACTTTTTTACCATTGGGATTATTTAAATTC 263503 37 100.0 36 ..................................... TAACTACTTTTTAGATTTACGTTTTTCCAGTCCATG 263576 37 100.0 34 ..................................... CCGCTGAATCACCCTGATCGAAAAATTCAGGATT 263647 37 100.0 36 ..................................... GGATATCTTGTTATCCATGATGTTATAAAGTTTAAG 263720 37 100.0 36 ..................................... GGATATCTTGTTATCCATGATGTTATAAAGTTTAAG 263793 37 100.0 37 ..................................... ATCCCCAGGATTTTCCGGAGGACGTGCCGAAGCCCTG 263867 37 100.0 37 ..................................... TATCTCCTGCTTTGTACTTGATACCTTCCATGTTTTT 263941 37 100.0 37 ..................................... CACTGCTGGAAATATCCTGCCCAACTGTAACCTGAGC 264015 37 100.0 35 ..................................... ATTTAGTAGAATACTTCTCTCTTAAATAAGTTTGT 264087 37 100.0 36 ..................................... AATCCAAATCCCCAAATATGAATCCTCATCAAAAAA 264160 37 100.0 37 ..................................... TCATGGCTTATTTTTGTTATATCTATGTCTAAACCGT 264234 37 100.0 35 ..................................... TATCGTACTTATCGACTTTCAGTTCATCAGCCATT 264306 37 100.0 36 ..................................... AAGGAATTAAAAGTTTTAATTTTCCTTAATGCTACA 264379 37 100.0 36 ..................................... ACCTATATGGTAGGTCATCTACCAATTTAGAATAGT 264452 37 100.0 35 ..................................... AACTTTTTGTTTGTAAACCCAACTTCATATTCACC 264524 37 100.0 37 ..................................... CATATGTTGGAAATATTATTCCAAAACAAAGGGTTAT 264598 37 100.0 38 ..................................... AATACAAGTTTTCGGCATCATTGCCTCTTAATACTGTT 264673 37 100.0 36 ..................................... AATTGCTTCACCGTCTTTACAAATAGTTTTTTGTGT 264746 37 97.3 34 A.................................... ATTGTTTAGTAAATTTCTCCGTTTTCTGTAAAGT 264817 37 100.0 33 ..................................... CTTCAAGATATGGGATAAGGTCTTGGATACGGG 264887 37 86.5 125 ..............................GG.C.GG GCGTGAAGAAAGGATCCCTTTGGATCATTTTAGCCCCGGGCCAGGAAGCGGGTGGGGTAATGTCGATAGTAGTCGAAAAGTGGGTTTACCTAAAGGTTCCTCACGTGAATGCTAACAAAAGGATA 265049 36 73.0 0 AACC....-.....................GG.C.GG | ========== ====== ====== ====== ===================================== ============================================================================================================================= ================== 51 37 99.2 38 CCTAAAAAGATACATCCACTACAATAAGGATTAAGAC # Left flank : TTGACCTACCGCCCTGCCCCCAATGGCTGGGTTATGGTGGAGGGTGCTCTGGAGGAGGAACTCGGCGATTTTTCGTCATTTATAGAGGTAAAGCGGGGAATGTTTACGTCCAGGGATGGCCAGGAATTTGGCTTTGTAAAGGATGTGTTTGTTTCCCCTGCCATGGTGAACCGGCACGGGCTCCGGTCTGGGATGCAGGTGGAGGTGAGTTCCGGGCCGTCCTATGATACGAAAAAAGGTACTTGGGGGAAACAGGCGTTTGAGATAGAGATTTTAGGGGAACAATCAAAAGGATAAGACATTGGTGCTATTGAATGGCTATTTCAACGCTACATTTTTGGGCAGATAAGGGAGGTTCAAAAAGGTATGAAAGCTGCCAATTACGTTGTATATTTGGAGAGGGAGAAAAGAAAGGTCAGGTTTATGGGGCAAAAACTAAAAAGTTTTCACAGGGTTTCGCTGATTAAAGAATTGATTTGCAACCCATTGTGGACTTTGCT # Right flank : GGCGTGAAGAAAGGATCCCTTTGGATCATTTTAGCCCCGGGCCAGGCAGCGGGTGGGGTATTGTCGATAGTAGTCGAAAAGTGGGTTTTCCTTAAGGTTTATCACGTGAATGCTAACAAAAGGATAAACTAAAGACACATCCACTACAATAAGGAGGACGGGCGTGAAGAAAGGATCCCTTTGGATCATTTTAGCCCCGGGCCGGGCAGCAGCGAAGGGTAATGTCTATAGTCTTCTAAATATGGGTTTACCTCTTTGTTTCGCTCAAGAACATTACGACATATGGTGATATGCTCATATGATTTGTATGCCCCCGGGTTACGCCCATAGCCTTTCGGCCATTGGACTGCACCCGGGGTTATTGGGTGTTGAAACCCTGTCGGGTTTCTTTGTTATGTAGAGCGAAAATAGTGTAGGCTTACATTGGCGAAATTTGCATGATTTTGATGGAGGAGTTGCCGTTGGGAGAAACATATCATGGCTCGAATTGGATGCTGGGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTAAAAAGATACATCCACTACAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //