Array 1 153679-155144 **** Predicted by CRISPRDetect 2.4 *** >NZ_AERH01000017.1 Moraxella catarrhalis BC1 ctg00016, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 153679 28 100.0 32 ............................ AATTATAATGCTGAATATGAGGATAATATGAT 153739 28 100.0 32 ............................ AAGGAGGTTGCCAATAACTCATTTTCGCCCAT 153799 28 100.0 32 ............................ AATCTTTGGGCAACCGATGACATCAACCAGTG 153859 28 100.0 32 ............................ TTTGGCATGAGCATCTGAGAAATACCGCCTAC 153919 28 100.0 32 ............................ AGCCGCCCGCACACACACAAAACGCATATAAG 153979 28 100.0 32 ............................ TTTGGCTAAAATGTACCCACATTTAGGCATTC 154039 28 100.0 32 ............................ GTGGGGTCATACGCCCCAAAAATGATGGCCAC 154099 28 100.0 32 ............................ ACAAAGTCAAACACCCACGCTTTACTCACCGC 154159 28 100.0 32 ............................ AGCTTGCCACCGCTCAAAACGAGCTAAGCACC 154219 28 100.0 32 ............................ AATCAGGGGGCAAAGGACGCACGCCACAAATT 154279 28 100.0 31 ............................ CAAAATGATGGCCACAAAGTCAAACACCCAC 154338 28 100.0 32 ............................ CTAGCCGCTGGCATCATGCTGACCGCTTTGAT 154398 28 100.0 32 ............................ GCTAACAGAGCTTTCAACTGTGTTAATGCGTA 154458 28 100.0 32 ............................ GAGCAAATACGCAAATTACCGCTCCGAATATC 154518 28 100.0 32 ............................ ATTTTCACGGTTCTGCTGACGCAACGCTCCCC 154578 28 100.0 32 ............................ ATGCTGTTATCGCGCTCATCTTTGGGCAAAGA 154638 28 100.0 32 ............................ GTCAAATCTTTTTGAGCTGATTAAACTTCAAA 154698 28 100.0 32 ............................ CTGCTAGTCGCATGAAAATTAACAGCAATGGC 154758 28 100.0 31 ............................ AATCACGGATAGATGATGTATGACCATTCAC 154817 28 100.0 32 ............................ AGCTTGCAAATAAAGCAAGTACAGCGTCAGTT 154877 28 100.0 32 ............................ ATGCCTGACACCACACCGCCTGACTGCACTTT 154937 28 96.4 32 ..........A................. TAGCACCGCCCAGCCGCCCACACACGCACATC 154997 28 100.0 32 ............................ ACATCATCGCCGACATTTTGCACGATGACAAG 155057 28 100.0 32 ............................ AAGCGATTAATCCGCTCACCAATTGTTCTGTT 155117 28 96.4 0 ..........A................. | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.7 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACTCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //