Array 1 574210-576558 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPGB01000002.1 Parvibium lacunae strain KMB9 SC0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 574210 36 100.0 30 .................................... CGGCGCGTAGCTTGGGTGCGCGATGTACAA 574276 36 100.0 30 .................................... CATCCAGACCCGCACGTCGTCAGAAGTTGT 574342 36 100.0 30 .................................... TGGTTTGATGCGATACTTATTGACTTTATG 574408 36 100.0 30 .................................... ACAAAAAAATCAAAGTGGCAAATCTGCATA 574474 36 100.0 30 .................................... CAAAATCCACGGCTGGGTAATACTCAGGGG 574540 36 100.0 30 .................................... CGGAACTCGCTAAGGAACTCGACCTGTCTC 574606 36 100.0 30 .................................... GCATTCGGGCATTGCCTCCAGCTTGACTAC 574672 36 100.0 30 .................................... TTATATCTGTTTGTGAGCAGTTAGCTTTAA 574738 36 100.0 30 .................................... ATACTCTCTTTACTCTCGACTTTAATCTTG 574804 36 100.0 30 .................................... CGACGTGTTTGATGTGTACGCAAACCGTCA 574870 36 100.0 30 .................................... TGCAAGCTGGTTAACAATATTTGCAATTTG 574936 36 100.0 30 .................................... CGCTGACTATGGAACAAGTTGCAGGTAAGC 575002 36 100.0 30 .................................... CAGTCAAGCAACGAGGTTGCTGGAAATACC 575068 36 100.0 30 .................................... CAATGCTGAAGCCATTACAGCAGATAAATC 575134 36 100.0 30 .................................... TTAGCTCAAGCAATTGCGACTTATACAGAA 575200 36 100.0 30 .................................... TCTGGCATGTCTGACGTGGCAATTGGTTGA 575266 36 100.0 30 .................................... TGGTTTGATGCGATACTCATTGACTTTATG 575332 36 100.0 30 .................................... TTTCCTGTATGCAATCCACCGCCTCCGCCC 575398 36 100.0 30 .................................... ACAAGTCACCGATGTACGCACGATTACCCA 575464 36 100.0 30 .................................... TAATCGTCTTTAATGTAAGGCGTTAAAACG 575530 36 100.0 30 .................................... GACTGGATTAAATTGGTTACGCTTGGCCAC 575596 36 100.0 30 .................................... AGTGAACATTGTCACTGGAATGTGGGCTGA 575662 36 100.0 30 .................................... GATGCATCTACGGACAACTGGGACAAGTGG 575728 36 100.0 30 .................................... AAATGTATGCGCCGTACCGCTATTGATGCC 575794 36 100.0 30 .................................... CTTACCCGCCCGCAAGACAATCTTTCTTTG 575860 36 100.0 30 .................................... CTAATCCCGCCATTTAACGCCTCATCCAGA 575926 36 100.0 30 .................................... TGTAAATCCCGCATGCTCAAAAGCAGCTAA 575992 36 100.0 30 .................................... GGGCGCTTTGGATAAGCCGCTAAAGTCACT 576058 36 100.0 30 .................................... GGTATGCCTGAAATTCCTAATTTGTTTTGC 576124 36 100.0 30 .................................... TATCAATAGATGGTGTTTTACCGACGCTTG 576190 36 100.0 30 .................................... CGCAACGAAATGATGAACATTCACACTGAG 576256 36 100.0 30 .................................... TCAAAGGAGACGAGAAAGGCGCTTTCGGAC 576322 36 100.0 30 .................................... GCTTGAGGTCCTGGAACGACAAAGCGTTTT 576388 36 100.0 29 .................................... AGATAAAGCTAAACCGTACTTTTCAATGC 576453 36 100.0 31 .................................... ACTCTAGTTTCGGTTCTGGTTCTGGTTCTGG 576520 36 91.7 0 ............................T.A....T | C,A,C [576547,576551,576554] ========== ====== ====== ====== ==================================== =============================== ================== 36 36 99.8 30 AGTTTAAATCATTGAGATATGCGCACTAGCCGGAAC # Left flank : CAGTCTCCATTGCCCAAGTGTATTTAGGCGAAAAAGAAAAGCCCGACCTGCCCCTGCAAGGCCTACCGCTGATGCTGGCCAGTAGCTTGCGGGATGATTAACCATGCTAACGGGGTATCGACTCATGTGGATGGTGGTGATGTTTGATTTACCCGTTATCACCAAGGCTGAACGCAAAGCCGCTACCGACTTCAGAAACACCCTGCTCGATTTGGGTTTTGAAATGAGCCAGTTCAGCGTATACATGCGCTTTTGCACCAGCTACGCCCAAGTAGATACCTATTGCAGACAGGTGGAAATGGCCTTGCCAGAAGGTGGAAAAGTCAACATACTGCAATTTACCGATAAACAGTATGAGCGGATTGTGACTTTTCACGGTAAAGCTAAACAACCCGCCAAAAAATCCCCCGATCAATTTGACCTTTTCTAAATATGCCGCTCATTTTCATGGCCCATAAAGCGAAAAACCCCTTGAATAATCAAGGGGTTATCGCACTGCG # Right flank : TTTAAGCCTGATCACTTTTCTTGATCAACCCTGCCAATAGCTTATTGACGGGTTTATTTTTTTGGGTGCCGTTTCCTTTGCTATCGCGGGCGCTGGCTTGTTTTTGCTGGTTTTCAATTTTCTTGCCGCGCTGCTTTTGCATGTCGGTAAATTTCATGGCGGGTTCCTAGTCTGTCTTTGGCTGATCAGCCTTTATTGTACTGGATGGGGGCGCTGCGGCCGCTGTCGGCAAGCGCTGAATCTCTTGTCGCAGGGCGGCGATTTCGGCGTGCAGGGTACGCATGTTGTGGTGCAGCTCACGCTGGAGCTTTTTTTCATCTTCGCCAATCAGCAAAGCGGCGAAATAGGCAGTAACGACCGATAAAAACGTAAAGCCCGAAAGCACGGTAAACACAGCCAGCAAGCGCGCCGCATGGCTGGTAGGCACAATGTCGCCATAGCCCACTGTTGAGCCAGTGACAAAGGCGAGCCAGAGTCCATCCAGGTAGCTGGTTGCGGTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAAATCATTGAGATATGCGCACTAGCCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //