Array 1 139847-136684 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG730316.1 Clostridium sp. M62/1 Scfld7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 139846 32 100.0 35 ................................ TTTTACCTCCAAATATAAGTATAACATGCTTTGTT 139779 32 100.0 36 ................................ AGGCCATCGGATTCATAGCGCAGGAAGTAGAGATGG 139711 32 100.0 33 ................................ CTACCCTTCTGCTCCCTTTGGAATTACTCCTGG 139646 32 100.0 35 ................................ CCGAAAACAATATTAGCAATGCCCCTCCAAACCAT 139579 32 100.0 33 ................................ CCTCATCTTCGGAAGCAAGCTTGACTCTGCGAA 139514 32 100.0 34 ................................ TGTTCCAAGGCCTACATGTTCCGGCAATACTGCC 139448 32 100.0 34 ................................ CAGCAGGTCAGCCCATTTTGTACGGGCAAGGGCG 139382 32 100.0 34 ................................ CATCCGAACAAAATGAGCCTTGGCTGGTAATAGA 139316 32 100.0 35 ................................ AAATTTACGCCACGATCTTATTTATTGTTTTACTC 139249 32 100.0 34 ................................ ATATGGACAAGGGAAAGGTAAGCAAAATACATGG 139183 32 100.0 36 ................................ CCAATGAGCCACTACATCAGGGTGTGCTACACCGTC 139115 32 100.0 34 ................................ ATCCGCACCGATTCAGACGGACTTTTGCGACGGA 139049 32 100.0 34 ................................ CATATCCTTTTGGGCTATCTATGTACATGTATTC 138983 32 100.0 37 ................................ CTCCTATGCATCACCACAGGTTTTTCGCCCTCTCTGG 138914 32 100.0 36 ................................ ATTAAACACTGCCGCCATATCTTTTCCGCCGTCTGC 138846 32 100.0 34 ................................ CATTAATCTGTCTTTTAAACCAAATGGATATATT 138780 32 100.0 36 ................................ TTGCCAGGATGCTTGAAGAGAAAGCTGCTGAGAGTC 138712 32 100.0 34 ................................ TGGAGCAATAGAATATACTTTTCGTGTACTTTTG 138646 32 100.0 34 ................................ TACTATTGGATTTTATATGTATTCTGGAATGTAT 138580 32 100.0 33 ................................ CGCGATGTAGGTGTCCGCCCGTCCTGTCTCCGA 138515 32 100.0 36 ................................ CCGGATAGCTTTTTTGACCTTGCCATTGTAGATCCA 138447 32 100.0 37 ................................ TAATAGTGGATTCTTTTACATGCGCCCTGGTCTTTTC 138378 32 100.0 33 ................................ TACGTCTTTTACTTCCGCTTTATTTAAGACAGC 138313 32 100.0 35 ................................ AAAGACGGCTCCGTCATCAGTAGCATAGGCAAATA 138246 32 100.0 35 ................................ CGAACTGTTTCGTCGGCCTGGGCCTGAATCTTATC 138179 32 100.0 33 ................................ ATAAGCCAGATCATCCTGATACCTTCCGTAATC 138114 32 100.0 34 ................................ CTGTGTATCCTGAAATTCCGTGTTGCTCTGCCAG 138048 32 100.0 35 ................................ TTGATGACATTTGTTGTCTATGACGTAATGATACA 137981 32 100.0 34 ................................ CGAATTGCCCCCGCTGTTTATATCCAGCATCAGA 137915 32 100.0 36 ................................ CCGCGTCCAAATCCTTCTTTCCGGCGAGTAGACCAA 137847 32 100.0 35 ................................ TCTTGTTACTGTGACTAAAAAAAAACAGTAGAGCC 137780 32 100.0 34 ................................ TACATACGATTTTGCGCTTGCTACAATCTTCTCC 137714 32 100.0 35 ................................ AGCTTGTCCCTTTTAGACTTGCAAGCCCCTTCCTC 137647 32 100.0 34 ................................ TGCTTGATTGAGAATAAGATAACTGGAAATAACA 137581 32 100.0 35 ................................ CTACAGCGAGTATATGGACAGCAAACAGTCCTACC 137514 32 100.0 35 ................................ TCCTCCGCTTCAGGAAGTCCATAAAAGCAGCCCTT 137447 32 100.0 34 ................................ AACCTGCTCATCTGTAAGATCCGGGTTTGCAGTA 137381 32 100.0 33 ................................ AGTACAGCGATATAATTGCATAACCATCCCGGC 137316 32 100.0 36 ................................ CGGATGTGGAGATTGAGGAGAGAGAATGAGCACAGA 137248 32 100.0 36 ................................ ACTGTCCTGTACGGTCACACACCGGATCAGGGCATC 137180 32 100.0 34 ................................ CTTCATCTCCCGGTTCAAGATCTTAAATTTTCCC 137114 32 100.0 34 ................................ TCTCTTGTACCGTTCCAGAGCTTTCAGCTGCTGT 137048 32 100.0 35 ................................ TAATATAGAAAAAGGGAATCGTTCTGTTACCGACC 136981 32 100.0 36 ................................ TGTTCCAAAAATCAGAGTGCCGGAAATGCTCTGCTG 136913 32 100.0 34 ................................ CTCTATCCGCATCCCTCTTGCCAGTAGATCCGTC 136847 32 100.0 34 ................................ ACATGTCCGTTTAGAAGCTCTTCATCACTGTTTT 136781 32 96.9 34 .....................C.......... CAGTGCCGATGATACTATTATAGCACATTTTCGC 136715 32 96.9 0 ..............................G. | ========== ====== ====== ====== ================================ ===================================== ================== 48 32 99.9 35 GTCGCTCCCCTCGCGGGAGCGTGGATTGAAAT # Left flank : TATTGAATTTTCAAGGAACGAATCCCATTTTAGGTATGGGAAGTTTTAGTTAATTACTTATGATGTCAACACAGAAACACCGGAGGGAAAAGCAAGACTGAGAAAAGTGGCAAAACAGTGCGTCAATTACGGAAGGAGAGTCCAGAACTCCGTATTTGAGTGCATTCTGGACAGCGCCCAGTGCGTAAAACTGAAATGTGAACTGGAAGAGCTGGTAGATAAGCAGACAGACAGCCTCCGTTTTTATTATCTGGGAAATAATTATAAAACCAAGGTAGAACATATTGGAGTAGAGAGGGGGACGCCCGCAGATTCTGTATTGATTTTCTAGTGCGAATAACAGTTACACATAAAATTCCCTGGAGATTCGCACCGAAAAAACTGCACAAAAAATTATGAAATGGACAGGATAGAGGGAAAAATGGCCTGTAATAATAAATTATGAATGAAAAAATGTGCAAACTGCTGAAAATCGCACAAGATATTTGGGCAGTTTTGCC # Right flank : TCTGTATTCTCATTACCATTATATCAATTTAATATGTCAGTCATCTAAAAAATATATTTTACAGGTGTCTAATAATCAGTGTAATATATGAAGTATAGGTAAAAAATTACAACCGACAGGAGGCAATTTCATGAAAGAAAACCATAGCTTAGAAATGATTGGAATTCAGAATACCACAGGCAAGGTTCACTACAATTTAAGCCCTGCCCGTCTGGTAGAGGAGGCTCTTCGCCGCGGTGAAGGTGTGTTAACAGATACAGGTGCTCTTTCTGTTACTACAGGCAAATACACAGGACGTTCACCAAAAGACAAATTCATCGTGGACACAAAGGACGTTCATGATAAGATTGCCTGGGGAGATGTAAATGTTGCTATCTCTGAGGATGCCTACCAGTCAATTAAAAATAAAATGTTTGCATATCTGGCTGACAAGGAATTATACGTATTCCAGGGTTTTGCAGGAGCTGACAAGAAGTACACCAGAAAGTTCATGGTTGTCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCTCGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //