Array 1 64166-62413 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP080761.1 Diaphorobacter sp. MNS-0 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 64165 36 100.0 31 .................................... CCACCTGACACCGTCACCGACAACGCAGTGA 64098 36 100.0 30 .................................... AGTGCGGAACGGTACACGACCGCGACGTTA 64032 36 100.0 30 .................................... GGTCATCCACTACGCCCAGCTCGCGCTGGA 63966 36 100.0 30 .................................... CAGTGGCATTGATGTGCGCCGCGCCCACTG 63900 36 100.0 30 .................................... CTTCGAACACGCGGCGGTTCAGACGCCCCC 63834 36 100.0 30 .................................... TTGGCGGCGCCAGTGACGTACGTCAGCATG 63768 36 100.0 30 .................................... CTCATGGTGCGTATGTCGCCTGATTTGTTG 63702 36 100.0 30 .................................... TAGAGCGGCTCTGCCCATTCGTCACCGTCT 63636 36 100.0 30 .................................... GATACCGCTGCTGGCGGCGCTGCCTTCGTT 63570 36 100.0 30 .................................... CCATCCCACGGCTTGGCACTCTCGGCGAAC 63504 36 100.0 30 .................................... TGGCGCTGCCATTGCGATTGCGGTGGCACA 63438 36 100.0 30 .................................... AGGGTTGCAGCACCTCCTTCGTGCCCGGTG 63372 36 100.0 30 .................................... TGCCTGGGTCGCAGAGCTACAGCAGCGCGG 63306 36 100.0 30 .................................... GGAGGTGTCGCCGTGATTTCCGGTCTCTAC 63240 36 100.0 30 .................................... CCTGGCATCGGAGTACGCACGCCCCGTTCG 63174 36 100.0 30 .................................... AGTCGTTCGCATGCCCGTTATTGCGGGCGG 63108 36 100.0 30 .................................... CCGTGCCATAGCAGGCTGCACCGACCTGAA 63042 36 100.0 30 .................................... TGCAGAGCTATGGGAGCGCACTGATGGCCA 62976 36 100.0 30 .................................... AGGAGAACTCGCCCTAAATTTCCACAGCCC 62910 36 100.0 30 .................................... TGTCAAAGGGAGGAAGGGGCAGAAAGCATC 62844 36 100.0 30 .................................... GGCTTGGGACTGGGCCGACTTCACGCCGTG 62778 36 100.0 30 .................................... ACGTCTCGATCTGTGAAGTCAAGATGGGAA 62712 36 100.0 30 .................................... TGGGTTCTGGTGCGGGGCTGTGTTGTGGTC 62646 36 100.0 30 .................................... CCCTGCGGCCTCGCGGTCGTTGCGCAGCAC 62580 36 100.0 30 .................................... AAGTTCTGCCCTGGCACGAAAAACCCGGTC 62514 36 100.0 30 .................................... CCCTGCGGCCTCGCGGTCGTTGCGCAGCAC 62448 36 94.4 0 ................................TG.. | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.8 30 AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Left flank : AAGCCGTTCGGCAGCAGCAGACCCGGCCGATCCTGGACGCTCTTAACGAGTGGATGACGCTGCAACGGCGCCAGGTGCCCGACGGATCAGCAACCGCCAAGGCGCTGGACTACAGCCTGCGGCGCTGGGATGCGCTGACCCGATTCGTGGATGACGGACAACTGCCGGTCGACAACAACTGGATCGAGAACCAGATCCGGCCCATTGCCATCGGTCGTAACAACTGGCTGTTTGCCGGCAGCCTGCGTGCGGGCCAGCGAGCGGCCGCCGTCATGAGCCTGATCCAGTCGGCCCGTATGAACGGGCACGACCCGTATGCCTACCTCAAGGACGTGCTCACGCGACTGCCCACGCACAAGGCCAGCCGCATCGTCGAGCTCCTGCCACACCGCTGGAAACCCGCCGACGCCTGATCACCGGCCTCGGTAGGCCTGGGTTTGCCGGACGCTTACGAGAGAGGGAGCTACAACAACCTTGAAGTGCTTGTAGAGCTTGGTCAT # Right flank : CGTATTCAAGCGGGATAAACCCGCCTGAATACGGTCAGCGCTTCGCGCACGTCGATCAAGAAGAAAGCAGCGCAGTGACCACAACGAACTCTGCCTTGAGCAGCCAGTCTCTGTCGCGCCACCATCAGCAACCGTTGACTGCTTCCTATTTGGCCGCATCGTCGATGCCCCACCCACACGCAGCTGCGCTTGTGCTTTACCGCGAGGCTTGCTCCCGCTGGTGTACGGCCACGCAAGGCGCACGCCCTGCGGGACTCTGGCGTAACGACTCAGCCCCCGAACAGCTTGTTGGCCGTCTCGGCCACCAGACGGCCCTGGAAGCGTGCGCCGTCCAGCTCGGTCGCGCTGGGCTGGCGCTGGCCCTGGCCGCCGGCGATGGTGGTCGCACCGTAGGGGGCGCCGCCCACCACTTCGTCCAGCGTCATCTGGCCCTGGAAGCTGTAGGGCAGCCCCACGATCACCATGCCGAAGTGCAGCAGGTTGGTGATGATGGAAAACAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 69239-66626 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP080761.1 Diaphorobacter sp. MNS-0 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 69238 36 100.0 30 .................................... CGGTTGCGGAGGCCAGATCCAGCGTCTTTG 69172 36 100.0 30 .................................... CTTTTGGACGTGGACTTCAACGATCCGGTT 69106 36 100.0 30 .................................... CGCCCGCGAATGCGCCCGATAGCTGCACCA 69040 36 100.0 30 .................................... TACATTCAGGCGCTCCTGCCACTCGCGCTC 68974 36 100.0 30 .................................... TGGGTGGATCACCGCATCGGCAATGTCCCC 68908 36 100.0 30 .................................... GTCCGCGTAGAGCTTATTCAGTCGGTTTTT 68842 36 100.0 31 .................................... CCTCTCCAGTTGACTCATCTGCATAGGGGGC 68775 36 100.0 30 .................................... CATGCGGACGTTCCATTGCGCTGCCGCGTT 68709 36 100.0 30 .................................... CTCTTCCGCGAGGGCTCCGGCAATGGCGGG 68643 36 100.0 30 .................................... CGATCTATCAGGAGAAACAGTCCGCTGTCA 68577 36 100.0 30 .................................... TTGTGGGGTGTCATCAACACGAGTGAGGAG 68511 36 100.0 31 .................................... CTGCCCTGAAAGCGGCGCTGCGCGAGGATGC 68444 36 100.0 30 .................................... TCAGCTGCTTTTGATGCTTTCATGGGCCGG 68378 36 100.0 30 .................................... GTGCGCACTGGCGGCGGTGCTACTGGCACC 68312 36 100.0 30 .................................... CCAGCAGCATGAGTTCGGTTTCTAGCTTTA 68246 36 100.0 30 .................................... TATTGGCCCTCGTGCCCTTCTTCTAGGAGC 68180 36 100.0 30 .................................... TTCCTGGTGCAGCTCCATGAGCTGGCGCGC 68114 36 100.0 30 .................................... CTCCAGCGCAATCGGGTGGAGCCATGCGCG 68048 36 100.0 30 .................................... CTGCGGAATCGTGGTTCGACTCCATGACTA 67982 36 100.0 30 .................................... TGCCATTATTCCGCCCGCTTTTCATCAATG 67916 36 100.0 30 .................................... GGCATGCCGGATAAGTACATCCGCAAAGTG 67850 36 100.0 30 .................................... TCTGAAAACTGCATCCAAATCGACCGTCAC 67784 36 100.0 30 .................................... TTCACATCCTGCCGGCCCTCCAGCGTGGTC 67718 36 100.0 30 .................................... CTATTCGCCGCTGGGTGTTGTGGCCTGCGT 67652 36 100.0 30 .................................... ACGGTCGTAGGTGTGCATCCACACCGTTTG 67586 36 100.0 30 .................................... CTCATCGGTGACAAGGCCTGTGGCCATCAC 67520 36 100.0 30 .................................... TCAACGCTGGCGGCGATGGCGGTGCCTGTT 67454 36 100.0 30 .................................... GCCGTACTTGTAGTAGTCGACCATCTTGCC 67388 36 100.0 30 .................................... AAACCACCTCTACGGTGTTGTCGGCTTCGT 67322 36 100.0 30 .................................... AATTCCTCAAGCACAGTCAGCTTGGCTTTT 67256 36 100.0 30 .................................... AGCGCGAAGTGACAGCCGCGCGCAGGCGCA 67190 36 100.0 30 .................................... CATAGAGGACACCGGGAATATTCGCGCGCG 67124 36 100.0 30 .................................... GCTGAAGTTGGACATGCGCTCTTCGAGCAG 67058 36 100.0 30 .................................... GATTTTTCAGCATTGTCCTGCCTGAGTCCA 66992 36 100.0 30 .................................... GCACCCCACTGACGGACGGGCAGAGGGCGG 66926 36 100.0 30 .................................... GTAGAACGGTTTGATGAACTTCATTTGGTT 66860 36 100.0 30 .................................... CCGTCAGCGCATCTATGCGGAGCTGGTTGG 66794 36 100.0 30 .................................... CATTGCTGGGGCTTTGTCGCACGTCCTTTG 66728 36 100.0 30 .................................... GCTTGTGGCCGATCATCAAGACCGTATAGA 66662 35 88.9 0 ..............................G-..CG | AT [66633] ========== ====== ====== ====== ==================================== =============================== ================== 40 36 99.7 30 AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Left flank : GGCGCGGCTGTACGACGGCGGTAGCGAGCAAGTGCTGGAGCTCCCCGGCCTGATCGGCCTGCGCCAGCACGTCTTCGAGATGTAGCGGCGCGCACGCACCACCATGGGCCAGGACACGAGGCGATTCATGCGCATGTTGGTGTTCTTCGATCTGCCCGTGGTCACTAAGGCCGAGCGGCACGCCTACACCGTGTTCCGCCGCTTTCTGCTGAACGATGGCTACGACATGATCCAGTTCTCGATCTATGGCCGCATCCTCAACGGCAACGATGCCGTGCAAAAACACATGCAGCGCCTGCTGGCCAACCTACCACCCGAAGGCTCGGTGCGCGTTCTTACGGTGACGGAAAAGCAGTTTGCAAGCATGAAACTGCTGGTCGGCATGCCGCTGTTTCAGGAAAAAAAGGTCTCGGCCAATCAAATGGCACTGTTCTGAAACCGATTTTTGGAGAACGAAAACCCGCGCTCCGCCAAGCGGGGCGCGGGTTTCGAGGGGGCCG # Right flank : GTCATCCCACCCTTGAGGGCGGCGGCGTAAGCGGCAACGATGGTGTCCACCAAACCAGATAGGTGGACACCATGACCGAAGCCCAGAACAAGACCCGTCGGCGCCACAGCGCCGAGCTCAAGCAGCAGATCCTGGCCGAGTGCGCCCAGCCCGGTGCATCGGTGGCCAGCGTGGCGCTCTCGCACGGCATCAACGCCAACGTCGTGCACAAATGGCGCCGACTGGCCCATGCCCCCAGCACAGATATGCAAGTTCCCACCTTCGTGCCGGTGACGCTGCCTGCGCCCAGCTGTGCGCCGGCCCCAGACATCCGCATCGAGTTGCGCCGTGGCGCTACCAGCATCTCGCTGACCTGGCCGGTCTGCGCGGCCGAGCACTGCGCGGCCTGGATGCGGGACCTGCTCAAGTGATCCGCATCGACGCCCTGTGGCTGGCTACCGAGCCGCTGGACATGCGTGCCGGCACAGACACCGCGCTGGCCCGTGTGGTGGCCGTCTTCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTAGCTATCCGGGGTGAGAGAGGGAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //