Array 1 864025-863877 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035458.1 Photobacterium damselae subsp. damselae strain KC-Na-NB1 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 864024 28 100.0 32 ............................ TCTACATCTGCGCACTCTGATGTTCCTTTCTC 863964 28 100.0 32 ............................ TATAAAGCATTTAAAACACAGCCGCCAAGTGC 863904 28 78.6 0 .....................CATACT. | ========== ====== ====== ====== ============================ ================================ ================== 3 28 92.9 32 CTTCACTGCCGAGTAGGCAGCTTAGAAA # Left flank : GATGAACTAATGGCTTTACCTTGGTTGAAAGGTTTGCGTGATTACACCAAAGTTAGTGCAATCTTACCAATACCTCGTGATATTGCAGGGCATCGCACTGTGCATCGCGTACAAAAAAAGAGTCCTCATAATTTGCGTAAGCGTGCGGTAGCAAAAGGCCGAATGACTGAACAAGAGGCTCTGACGAAAATCCCTGATGCGTTACAAGAAAGATTAGCTTTACCTTTTATCCAGATGCAGAGTTTGTCGAATAAGCAGGTAATGCGTATTTATGTTGCGCTAGGAGAGATTCAATCAGAACCTGTTTTGGGTGAGTTTTCTAGCTATGGTATGAGCCGCACGTCGACCATTCCTTGGTTTTAATCTGTAGACCCTTTTTTTAAGCTTATACTTAACTTATTGATTTATAAGTCATATTGTAATAGGTGAGAAAAAAGGGTTTTTTATTGAAAAATGACTTAAGCTCTTTAAAAATAAACCGAAATCGAATAAAGTCTTCA # Right flank : AGTAAACTTTGGAGCTAACCTTTGCTTTTGGTATCCTTGGTGCTTATCGCTAAGATCATTAGCAAAAGTATAAACATAGGTACTACATGCTCACAATCTCAAACAATGTGACGATTTCCGATTGGGAGATTGAACTTAACGCTATTCGCTCTGCGGGAAATGGTGGGCAAAACGTCAATAAAGTAGCCACAGCAATTCATCTTAGATTTGATATTAAGAAATCATCACTGCCAGCTATTTATAAAGAAAAATTACTTAAGCTATCAGACAGTCGAATTTCTTCTGATGGTGTGATCATCATTAAATCGCAGCAATATCGAACCCAACTGCAAAATAAAGAAGCTGCTCTTGAGCGATTAAAAGAATTGATTTTATCTGCGATGGTTGTACAAAAAGCCCGTCGTCCAACTAAGCCAACTAAAAGCTCCCAACGTCGTCGTTTAGAGTCAAAAACCAAAAGGGGATCGACTAAAACGATGAGAAAGAAGGTTGATTATTAA # Questionable array : NO Score: 5.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 874932-874484 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035458.1 Photobacterium damselae subsp. damselae strain KC-Na-NB1 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 874931 28 100.0 32 ............................ ATAATAGATTCATTGTTAAGAGAAAAATCTAA 874871 28 100.0 32 ............................ TAGTGCTAACTGCATCCCCTCACGCAAACCGA 874811 28 100.0 32 ............................ TTGTTTGCTGCTGCGTTTTTTCATAAGCGTCC 874751 28 100.0 32 ............................ TAATCCACAAAATACGGGGCAAAATACTTTTG 874691 28 100.0 32 ............................ GCTCCAGCTCCATTCAAACTCGTAGGATGGAA 874631 28 100.0 32 ............................ ACTCAGCATTGCTGGGCGGTTTGTGCCTCGGT 874571 28 100.0 32 ............................ TGTGACATCTCTAAGTTGATAAAAAGTGACAT 874511 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 8 28 100.0 32 CTTCACTGCCGAGTAGGCAGCTTAGAAA # Left flank : GTGTAGATCTAAAAGTCTCAAAATGTCATCTAATAATCTTTATTTTGATTCTTTTTGTGATTACTTTAAGCTGGATTCAAAAGGGAACAAAAAGTAGACGGTTAAGTTCAAGGAGTGATCATGTCTTCAATACCAACAACAAAAGAGGAATTGGAAAAAGCAATTAATGATTCTTTTTCTAAATTACTCATATACTTAAAAGCAATACCTGAATCTGAATCGCGGACACATTCTCGTCATTATCTAATCATCAACTCTATCAAGAACCATGGTACGAAAAATGGACGTTAGGGCGAATGATTCAGTTTAATACCTCATCGCCAATGAAAAATGTAAGAACTAAGGTACGAAGATTTAAAAGAGGGATGTGACCCTATTTTTTGACTTATTTATAAGTTATTGATTTATAAATATGTAAAATAGGACGCAGAAAAAAGGGTATTTTAGAATAAAGTGGTCTAAGTTCTTTAAAAATAAACCGAAATCGAATAAAGTCTTCA # Right flank : TAAGGTAGATATTTGTACGTTTTATATGCCATCTGTCAACGATCATTAAAATTTGATCCACTTTTTAACTGATTCCGATCAACCAAAAGTGATCCACATAATTACTCAGGTAATGTTCCTGAGCGACGTTTGTCTTTCAGGCGATAACTATCACCACTTAACTGAAGCACATGACTATGGTGAAGTAATCTATCTAACATTGCTGCTGTTAATGTCGCATCATCGGCAAAGGCCGTCGGCCATTGCCCGAATGATAAATTACTCGTTAATATAATACTTCCGTGTTCATACCGTTTAGCTATAACATTAAAAAACAGATTGGCTTCTTCTCGTCCAAAAGGCAAATATCCGATCTCATCAATAATTAATAATTTCGGTGCCATGATGGAGCGTGAAAGATATTGTTTTAATTTATTTTGACGTTTAGCTGTCGATAACTGCAACATCAAATCTGCGGCAGTGATAAAACGTGTTTTTTTCTTTGCTTGCACGGCTTTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //