Array 1 487676-474123 **** Predicted by CRISPRDetect 2.4 *** >NC_019892.1 Singulisphaera acidiphila DSM 18658, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 487675 36 100.0 35 .................................... ATTAAGCCTTTTCGGTCTCGAGGAGGCCCCGGCCT 487604 36 100.0 36 .................................... GCCAAGCGGGCCGCGATAGAAATCGAGAGACTGAGA 487532 36 100.0 36 .................................... CCGCCACCCACCCTCTCCTGGCTCGAAGTGTTCGCA 487460 36 100.0 35 .................................... GCCAGGGCTAGGGCAATCGAGCCGGCATCGACCGC 487389 36 100.0 37 .................................... TGCTCGAGTGCGGTGATCGGATCGCGGACCGGTTTGT 487316 36 100.0 37 .................................... AGCTCCTCTGAGTACGTGGCTCGCTGCCTCTCGCAGA 487243 36 100.0 35 .................................... TCCAGTGCGCGACGATGCTGCTCGGGAGTAAGTTC 487172 36 100.0 35 .................................... GTGCGGGACCAGGCTTGGGCCGAGCTCGACGCATT 487101 36 100.0 34 .................................... GAGAGGGTTAGAGGAAATCGCATGAAGCCGAGTC 487031 36 100.0 38 .................................... TCGGGGCTTTCTCGGCCAGAGGGAGAAAGGTGTTCTTT 486957 36 100.0 36 .................................... TCAAGCTGATGCAGGACGCGATCGGCAAGGGAGCCA 486885 36 100.0 35 .................................... CCGTCAGTCGACCTCACTCCGCTCGTCGCCCTCGC 486814 36 100.0 37 .................................... TTCTCGAGGCGATTCAGTCTCTGCTCCAGGAGACGCG 486741 36 100.0 36 .................................... AGCCGTTTCGGCTCACGATTCGGGACCGACCTGGCC 486669 36 100.0 38 .................................... AGGAGATCGTTGGCGTCGACGGTTCGACTCTCAAGCTC 486595 36 100.0 36 .................................... GTACGAACTTCGAACTGGCCGCGAACGATACGTTGC 486523 36 100.0 36 .................................... TGGCGACAATCGGGTTATCCCACAGACCGAAGAGGT 486451 36 100.0 37 .................................... GAGGGCCTCCGACCAACGCCGCGATGGTCGCGCTGGA 486378 36 100.0 36 .................................... CGGCAGTGGCTTTCTCCTCGGAGTCGAACACTCCTT 486306 36 100.0 35 .................................... TATTTGGCGGACGGCTCCGGAACCAACCAGGTCAG 486235 36 100.0 35 .................................... GGATTGGCCACGAACCGCTTGAGGTCGATGCCCAT 486164 36 100.0 36 .................................... AAACCGCCACACTGAGTGCACTGTTCGCCCGAGTCG 486092 36 100.0 36 .................................... AACCCGCAAGGATTACCCGTCAGCTCGCTGATCGGC 486020 36 100.0 36 .................................... AAGTTCTTTGATTTGAAGTCAAAGGCGACGGTGGTG 485948 36 100.0 35 .................................... GCCATCACGTCGAGGACTTCGCCGCAGTCAACGTC 485877 36 100.0 35 .................................... GCGGCCGGAACAGCCTTCGCTTGATGCTTCGGTTT 485806 36 100.0 37 .................................... TGCTCGGCAAAGCCGGGAGGGGCGACCGTGAAGACGT 485733 36 100.0 36 .................................... TTTTCGAGCCGCTCCCTCCAGACGGCCATCCCTACC 485661 36 100.0 36 .................................... GAGCCGCCCCTACCGGGATGCGGGCTACACCGTGGT 485589 36 100.0 35 .................................... TCCCACAACACCACGGTTGCCGTCGGCTCGGTCGG 485518 36 100.0 36 .................................... ATCACTCACTGTGGGGTACGGGGACAATAGTCTCAC 485446 36 100.0 35 .................................... TTGATTGGAACCGAGGGAGTCACCCCGTCGCCGTT 485375 36 100.0 36 .................................... TTCAATTTTTTCTGCCGATCGCGGTCGGCAGCCTGG 485303 36 100.0 36 .................................... AATTTCGGATCGGCCCGCTGTTCGGCCGTGATGATC 485231 36 100.0 35 .................................... CGGCCTGGCAGCGGGACATCGGCTTTGCGATCGCC 485160 36 100.0 34 .................................... CAGCCAGAGCCCCCTTGGCGTCGAACTCGACCGT 485090 36 100.0 36 .................................... TTTGGGCCACGGATGAAAGAGATCGTGCGGGAAGGG 485018 36 100.0 38 .................................... ATTCGGCGGCATGGCATTGCATCCATGCGCCCGGGATC 484944 36 100.0 34 .................................... ATTTTACTGTCAAACAGCGTGGAGTCCCGCTATG 484874 36 100.0 33 .................................... GGTCCGGTCGATCACGACGGTGCGTTCCGCGAT 484805 36 100.0 36 .................................... ATCACCCGGCGGCGAATCATCCGGTCGAATTGCTTG 484733 36 100.0 34 .................................... CGAAGGAATCACATGCTTAATCGGAGACTCCTCT 484663 36 100.0 35 .................................... GGTATGACTCCCGTGGCTTTCCCCTGCGCAATCTG 484592 36 100.0 36 .................................... AGGGCGGTCGTCTGCATTGACGCAGATCAGGCCTTC 484520 36 100.0 34 .................................... AAGCGAGGCAAGACGATCGAGGGGCCTTCGGTTT 484450 36 100.0 35 .................................... ATCGCTCAGGAGTACACCCGTCTGACCGGCATCGA 484379 36 100.0 36 .................................... TGACTCAATGATGACGCCCCGTCCTCCGAGAGGGTG 484307 36 100.0 37 .................................... TCCGTGATCGGCACCATCAGGCCGACCACGACATGCA 484234 36 100.0 37 .................................... TACAGCTACCCAACCAGGCCCCGCGCCGTCGTGACGA 484161 36 100.0 36 .................................... GCTAGCCTTGAAAGAGTCCACGACGAAGAGGAAATC 484089 36 100.0 33 .................................... TTGCTTCTGTGGCCGAGTCCACAACTCTCTTGG 484020 36 100.0 35 .................................... TATGAAGAAGCATAAGGACTCTGCCGGTAACAAAT 483949 36 100.0 34 .................................... TACGAGAACATGAAACCTTTGTGGGTTTGGAAGG 483879 36 100.0 36 .................................... ACGATAGGTTCTCTCAGCTTCAGTGCGGCCCTCGTC 483807 36 100.0 36 .................................... TGGCGAGTGTATGCGTGGAAGTCGCCTTTCAACCTT 483735 36 100.0 37 .................................... AACGCGTACTTTGCCGGTCTCTCGTGGTGCCGCTCGC 483662 36 100.0 38 .................................... TAGTCGAGGATCACGAGCCCGATCTTGTGCCGGAGCGC 483588 36 100.0 36 .................................... ACGGATGACGAGGTCCGCGCGACACTCGCGGGCCGG 483516 36 100.0 36 .................................... ATGGCCGGCACCGAGTGGCCGGTGAATATGATCGGA 483444 36 100.0 37 .................................... ATCTTGGTGGAGTCCATAGAGCATGAAGGCAAGCACC 483371 36 100.0 36 .................................... ACGCCGTGTCCAGCAGGGACAGCAAGATCGCACGGC 483299 36 100.0 39 .................................... ACGGGGCCGGTGATCGGCAGGGTGCGCTCAAGCAACTTC 483224 36 100.0 36 .................................... AGTGAAGATGTGGCTTCGGTGTCTCCCGTCCTGAGC 483152 36 100.0 37 .................................... ATCGCGAAGGGCCTCGGAGTGAAGCCAGAGGAATTGA 483079 36 100.0 36 .................................... AACTGGGCTCCGGTCATCTGGACACCGGTAAGCGGA 483007 36 100.0 35 .................................... GCGAGCATGAGGGCAGACCGGAACGGCAACTACCT 482936 36 100.0 35 .................................... ACCTCGTCCAAGAGAAACTCCTCGACCGGTCCAGG 482865 36 100.0 37 .................................... ACCGGGCGGGCCTTCATCGGGATCGTCGGCACGTATT 482792 36 100.0 36 .................................... CCGAACTTCGCACCGCTGATCCGTTTGGGGGTCACC 482720 36 100.0 34 .................................... GCCCCGCTGAAGGAGACCCGCGTTGCGCCACGGC 482650 36 100.0 36 .................................... GCGTGATACCCTTCCTGGTAGCATCCCCGTGGACAC 482578 36 100.0 34 .................................... GTCGGTCGAAACCGGGTGGGAGGACGGCGAGATG 482508 36 100.0 35 .................................... GTCGGAATGAGGGCGTGAAGGCAGATGAACCAATT 482437 36 100.0 37 .................................... GATCGCCGGGTACCACAACCCGGCGATGAGGCGGGTG 482364 36 100.0 34 .................................... TCACGGTCGCCACGGGCGTCCCTCTCCCCACCAT 482294 36 100.0 36 .................................... CATGATCGCGTCGTCGAAGTGTGGCGGTGCAGTGCG 482222 36 100.0 34 .................................... TCTGCGAAAGGACATTCGGTCTCGCGGCCGTGGA 482152 36 100.0 35 .................................... ACGACTTGGACGTCTACCACTTCTCGTTGCTGGTG 482081 36 100.0 36 .................................... AATTCTGCCTTCCATTGCTCACTGGATTTCTCCAAA 482009 36 100.0 36 .................................... GCGGTCGTGTTCGTGGCTGGGGGAACAATGGTTGAA 481937 36 100.0 36 .................................... CGGGTGTGGACGCGCTTCCGCCGCCGATCAAGTCCT 481865 36 100.0 34 .................................... GCTACGACACAGCCTCAGCCGCCGAACTGTTCTT 481795 36 100.0 37 .................................... CCGCGATGATCGTGCCGGCCGAGTCGCCGAAGATGAT 481722 36 100.0 36 .................................... TCGAAGAAGGTCGCGTGTTTCTGCAAACATGGGTTG 481650 36 100.0 39 .................................... ATCTTCGGCAACTGGAATGATCTAGTGATGGCGTTCTGG 481575 36 100.0 34 .................................... CAGGTCGCCTAGGGACGAACTCCGCAACGGAGTC 481505 36 100.0 35 .................................... CTACGAACAAGGATATCGAGGCCCGCGACGATACC 481434 36 100.0 37 .................................... ATTCCGAAGCGGTTCAGGAAGCCAAAGCGCTGTCTCT 481361 36 100.0 39 .................................... ACGACCAACGCCGAGTTGGCTGACCGCGAGAGTCGTTGG 481286 36 100.0 40 .................................... AACTTGCGGCCCGCCACCGCCAAATCTTCGAGGCGATCGC 481210 36 100.0 35 .................................... CGGCGACCGCCGAAACGACCAGCGCGATGATTATC 481139 36 100.0 35 .................................... GCCTGGTGTTGCTCGCGTTCCCGATCCTCACTCTC 481068 36 100.0 34 .................................... CCGATTCCGGTCCGACCACACACGCGTTCTCCGG 480998 36 100.0 36 .................................... CTTCGTAAGCTGCTCAAGGACCAAGTCCGGATCCGT 480926 36 100.0 38 .................................... TCGGTGTTCGCCGTCGCGGGCGCGTTGCCGTCGTAGAG 480852 36 100.0 36 .................................... TGTCAAAGGCGGACCTGCAGCGGTGCGTCGCCTCGC 480780 36 100.0 36 .................................... ATTCGCTGGTCGACGCCTCGTGACGCGAGGATCGAC 480708 36 100.0 38 .................................... GTTGCCTGACCCTGGGCGGCCGAGATTGGGCCGTCAGG 480634 36 100.0 38 .................................... TTCGAATAAAACGGGCCGGATGGCTCCGGAATGTCGGG 480560 36 100.0 36 .................................... CTGCCCACAGCCCTGGTTATGGCTACGCAAGCACTC 480488 36 100.0 35 .................................... TAGCCCATCCCATCGCGGTAGACTTCGGGAGCTGG 480417 36 100.0 38 .................................... ATGCTGCCCCAAGATTTGCCATGCCTGGTTGGGGCCGT 480343 36 100.0 34 .................................... ACGCGTCGGCTTACACCGTCTCGTCGGGGATCGG 480273 36 100.0 37 .................................... GGGTGCGCATGAGCGAGGTTGCTGGGTGGATCCGTGG 480200 36 100.0 37 .................................... CCTTGACTTACGCTCGCAAGATGTCTGCGAAAGGACA 480127 36 100.0 38 .................................... GACCTCTCGTCGGTCTCGAATGCCCCCAGGCAGCTCGT 480053 36 100.0 36 .................................... AACGTTCTTATTTACGAGCCAATTACCGTTCATGAT 479981 36 100.0 35 .................................... TCAGCCGCTCAGGCGCTCGAAGGAGAGTTTTCCGA 479910 36 100.0 35 .................................... AATTCACGCCAGATTGCCCGGCCTTCCGGTGACGT 479839 36 100.0 36 .................................... AACTCTTCCGCATGTACCAGGACGGCACCCTGAAGG 479767 36 100.0 35 .................................... GAAGACATGGCTTCCCCTGTGGGTAGCTTCGTCCG 479696 36 100.0 38 .................................... AGTTACTCCAGCCCTTGCGGGGACTGCGGCACTACAGG 479622 36 100.0 36 .................................... CTGGCCGGTGGCTGGCCAAACACCCTCATCGGTGAT 479550 36 100.0 35 .................................... GCAAGCGATCTCCTCGAGCCGGCCCGGAGTTGGCC 479479 36 100.0 37 .................................... TCGATCGGCCAGGAGGTGGATAAGCCAGGTCCGACCG 479406 36 100.0 37 .................................... CTCCACCCGATGCCTTGCCCGGTTTGTACCCGCGCAT 479333 36 100.0 36 .................................... TTGTCGCCTAAATTTTGGACGATCAATGACGGCGGT 479261 36 97.2 37 .......T............................ AGCCTCCATCGCCTTGCGGTAGATCCGCGCGGCTTGG 479188 36 100.0 36 .................................... ACGACGACAACGACGGGCCCGACCCGGCCGGTGCCG 479116 36 100.0 34 .................................... GTCGTTGCGCTTTATCCCATCACGGATGGCGTTT 479046 36 100.0 34 .................................... TCGGCAAGATCGTGATAGTCGTTCCGAAGCCGAA 478976 36 100.0 36 .................................... CGGATCACAGAGCAGGCGAAAGACAAGCTGGCGAAG 478904 36 100.0 35 .................................... ACGAACGAACAAGAGAACGAGTTGAACGCAAAAAC 478833 36 100.0 35 .................................... AAGCCGTCGGCGGCCGTCGGCCCAACTTCCTCGGG 478762 36 100.0 34 .................................... ATCGCCCGGGAAATCCAAGCGGAGCCCGCCCGCT 478692 36 100.0 34 .................................... ATCTCGGTTCGGATCGCGACGGTCTGGTGGAGGT 478622 36 100.0 36 .................................... GGTTCGCCGAGCCGGTGAGCCGCGCGTAGAAACCCC 478550 36 100.0 40 .................................... AGGTTCGATGCGCCGGTCGTGATCTGGGTGATTGCGGTGT 478474 36 100.0 36 .................................... AGGTCAAGTCGCGGCAACAATCTGGTCGGACGATGC 478402 36 100.0 37 .................................... AGGTCGGGCACGGGATCGGAATCGAGCATTCACCGCC 478329 36 100.0 37 .................................... AGGGCTTCGGCGGGATTGTCATCCGGCTCGGCAAAAT 478256 36 100.0 35 .................................... CCGGCAAACGTGGATTCGGCCGTCACGGGGACCTC 478185 36 100.0 35 .................................... ACCGTCTGCCCCGGGCCGGTGACGATCACCAGGCT 478114 36 100.0 36 .................................... ACGCATCCAGGCTTGGTGATATCTTCCAGGTCCGGA 478042 36 100.0 36 .................................... GCAACGGCGAGCCAGAGAGAGGGGGAGAGGCCGCCT 477970 36 100.0 36 .................................... GCGGCGCCGAGCTCGAACCACGATTGCGGTTGCGGC 477898 36 100.0 40 .................................... GCGGCATTCTACCGGGACGCCAAGAGCGAGTTGGCCGCGG 477822 36 100.0 35 .................................... AGTCCCGGGCCGGGTCTGAACACCTGATCGGGTGA 477751 36 100.0 36 .................................... CCATCCGTGGCGTCCTGGACGGACCGGGAAACGCCT 477679 36 100.0 37 .................................... CACGTCCTCCTACTCGCCCTGGCCCTGGTGAGCCAGG 477606 36 100.0 36 .................................... CTCCGCAATTCGGCCAGCCTGGTCGACCTCGACGAC 477534 36 100.0 35 .................................... AGCTCGCCGCGATGATCGAACGGCTCAAGGCCGAG 477463 36 100.0 35 .................................... AGCCCGACCATAGATTTCGGATTCAGCCGTCGTAG 477392 36 100.0 36 .................................... AGCGTAAGCTGAAACTTAGAAACCGATGGCGACTAA 477320 36 100.0 34 .................................... ACCGTGTAGCCGTCTCTCGCCTCGGTCGCGTACT 477250 36 100.0 36 .................................... ATCCTGCCCATCGGCCTGCGCGGTGACACCTGTGGG 477178 36 100.0 34 .................................... ATCTCTCCAAGCGGCAAACCGGCATCGCTTGGAT 477108 36 100.0 35 .................................... CTCCCGTCGCGGAACCTGCTTTCCGTCTCCGATTT 477037 36 100.0 37 .................................... CTCCTCAGACGCAGTGTATTGGTCGCTCTCCATCGCT 476964 36 100.0 36 .................................... TTCCTACCTCCATACTCCGCCGACACGAGCCACTGG 476892 36 100.0 34 .................................... AGACGCCGCCGGCCCCACGGATCACGACCCTTTT 476822 36 100.0 35 .................................... GTCAGCATGATCCGGGCTGACCCGGTGCTCAACTC 476751 36 100.0 35 .................................... ACGGCCAAGTCGCCGTAGTCAAAACAGTCGTTTCT 476680 36 100.0 35 .................................... ATATCCCAGTGAAGAACCCCTACGCAACCTCGCTT 476609 36 100.0 38 .................................... TCGGGATAGCCGAGATCGGCCGCCCAATCGAGGATATG 476535 36 100.0 37 .................................... AGCGAGCAGAAAGTAGCGATCGGCACCGTCACGCTGC 476462 36 100.0 37 .................................... TGGCGTTACCAGACCCAACTCTATCCCAGCGTTGCCG 476389 36 100.0 34 .................................... TGAAAGCCGACAAGTCTATCAACAAAGAGTTCAA 476319 36 100.0 36 .................................... ACGGCAAACCTGATCGCGAGGGACCGCGCGTCGTCC 476247 36 100.0 37 .................................... ACATGGGCAAGCACAGCCTGCTCGCATATCAGGTTGT 476174 36 100.0 35 .................................... GATCAGGCATACCTGCTCGCTCGTTCGCTGGAGGT 476103 36 100.0 34 .................................... CAACATGCCAATCCTGGCGCTCTCGCAGCTCAGC 476033 36 100.0 37 .................................... CTTCAGATCCTCGAACCGAGTCAGAGGCCGGTAGGCT 475960 36 100.0 35 .................................... GGCCATCGACCTGGGCGAGGACTTCGCCATTGAAG 475889 36 97.2 34 ......G............................. GAACATGGCTTCGATTATTACACCGCTTCGCAGA 475819 36 100.0 35 .................................... TACGCACGCACGTACACGTGACGCGCACGCACAGG 475748 36 97.2 38 ...................T................ ATGTCGACTGCGCCAATGCCAAGGTCGAGTATCGTGAT 475674 36 97.2 34 .........................A.......... CTTCAATTCTCGATCGAGTCCTCTGGCGAGGATC 475604 36 100.0 36 .................................... GCTGTGCTGCTCGCCAAACCCGCCGCCACTATGGAG 475532 36 100.0 41 .................................... GCTTCCGAAGGTATGACGGAGTCTATGCCAAGTCACGTCTT 475455 36 100.0 36 .................................... TAGCTCTGGGCGTCTTTGTTGACGAAGTTATAGAAG 475383 36 100.0 36 .................................... CAGATATCGTGCTTCCTCCTCAAACTCGTACTATTT 475311 36 100.0 35 .................................... TTCTGGCGGCTGAACTAGGAGTGTCTCCGACACGA 475240 36 100.0 35 .................................... ATCGTGTCGCGAAGCTCGAGCGCGCGTTCCTTCTC 475169 36 100.0 34 .................................... TGCATGCGACCCTGAAGCCAGGCGATGGTGATAA 475099 36 97.2 35 ..................................C. CCCCCACCCGATCCATCGGGTGGGGGGGCAATCCG 475028 36 100.0 37 .................................... TCGATCCCATCTCGACCAAACGCTCCCGTCGCTGCCG 474955 36 100.0 41 .................................... ATGTCCGAGCGGTTCCTTGTCAAGCCCGTCGACCCCAAGGC 474878 36 100.0 37 .................................... CTTCCCCAGAGGGGCAGCTCGCCCGTAAGCAGCTCGA 474805 36 100.0 35 .................................... AAGTGAGGCGAGGCAGGAGATTCAGCGTATCGAAT 474734 36 100.0 37 .................................... GCTTCCGCCCGGCCCCGCCCACCGCGGATAACTTCGG 474661 36 100.0 35 .................................... TTGAAGCCTTGCTCGACCCCTCGCCGGAGTGGAAC 474590 36 100.0 35 .................................... ACCACTAAAAAAAACACAACGCATTCTCATATCAA 474519 36 86.1 36 .CT......AA.......T................. CTTTTTGAGAGGAGCCCGGTGTCGGAGGGGGCTTCC 474447 36 100.0 36 .................................... CCGATCCCCGCGCGGCATTCCGATCTCGCGGGACTC 474375 36 100.0 36 .................................... CTCTTCACGCCGTCCACGCTCATGATTCCTCGTTGG 474303 36 100.0 37 .................................... CGCTCAACCTAGATGGCCACCGGATCTACCGGTCGAT 474230 36 100.0 36 .................................... TGCAACCCGAGATTTGCCTGGGCGCGAACAATTCCC 474158 36 97.2 0 ....T............................... | ========== ====== ====== ====== ==================================== ========================================= ================== 189 36 99.8 36 GTGCCGACCTCTGTGATGCCGCAAGGCGTTGAGCAC # Left flank : CGCCGCGCCGCCAAGGTCCTTGAAGGTTCAGGCCAGCGAATGCAGGAGTCCGTCTTCCGCTGCTGGATGACCCCGAGCCAAATGCACCGGCTTCGGTGGGAGCTCACCCAAGTTCTCGAACCGAACGACGAAGTGCTGCTGATCCCACTCTGCCCCCGCTGCGTCGGAGGCATGGAGACAACCTACTCCGCCCAGAACCACCCTGATTGGCCCGATTCCCCCGAACCCCACAGGATCATCTAACTCCCTGATTCAAGCATCTCCGGCCGTCGTGCCGAGTTCTCACCGCCGATGGACCGATCTCGTTCCCCTTCTTCAACATAGGGCTCTTTGGCAATACGAACGATCCATGATTCACCCGAACCCCGCACCGCCTATCAACTTGCAAACCGTTCTCCCCAGAGTCGGATCCCGTTTTCAAAGCCACCCCCAACTCTCCAAGCCCGTGCTTGAAAACGTGCTCCGCATCCTCTATCATACGAACAGTTTACAAGCGAGCG # Right flank : GCGTGGCATCCAACGTCAGTAACTCGGCGTCGTCAACAACGGATGTAACTCTCACGGGACCAGAGAATTACTACCGCCCCGTGGCTGCGGTTCGTTCGGGAGAGAGGGGGCAAAAAATCGCCGTTCTTCGTCATGATGGGTGCGGCTAGCAACCGGCACTCACCTGGATTGAGGAAGAACGGCGATGAAGGCAGCTCGGACGCTGCAAGGCTTGCAGCAACCGCAGTCGTTGATCGGCTATGTCCGACAGTTTCTCACCCCGACGGTCTGGAAGCAAGCCCGAGGGGTTGTTCCTCAAAGGCGTTCGGCGCCGCGGTGGGATCTCCAGCCGCTGGTCGTGGTCATGCTCGCCATGACCTGGGCCACCGGCGACTCCGAGTCCGAGAGGTTCGAGAAGGCCCGGGGATACTACGTCGCCTGCCATGAGTCGCGAAGACGCCCGGGAAAGACCTTCGTCGGCTTCCAGAAGGCGATGCGACGCGGCCCCATGCGACAACTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCGACCTCTGTGATGCCGCAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 5269647-5269404 **** Predicted by CRISPRDetect 2.4 *** >NC_019892.1 Singulisphaera acidiphila DSM 18658, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 5269646 37 97.3 27 ....................................T CTGAGGAACCTGAGCAGTCGTGAGAAT 5269582 37 97.3 34 A.................................... GGCGTCAGTGTGAAAGCACGGCTCGCAATACCTT 5269511 37 100.0 34 ..................................... CCATTCAGTGGCGACTGGACAAACATCGCGAGTA 5269440 37 91.9 0 ....G..C...........T................. | ========== ====== ====== ====== ===================================== ================================== ================== 4 37 96.6 32 GTCTTCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC # Left flank : TGTGATGCCGAAGGCGTTGAGCGCATTCGGAATGGCTTGGGGACCAACCATGGCGGATGAGTCACAACGAAAGCCAGTCAAAATCGGCGTCAAGGAAGGGGGAGGGCCGCCTCCGGGATACAAGTGGAACGTCGAGATCCTTGAGCAAGCTTTTGCTGAAGCGATGGGGTTTCTCAATGCCGACCAGTATTGCCACCTCGCCTCCCAATTTCGCGAGTTAGCCGGTCAGGATGAAGCCAGCCAGAGCCAAACGGTTGACGTCCGGCCCATCGAGGATTTTTACGAACTCCGTGACAAGGGAGGCATCCTTAGAAGGATGAATACACGCATTTTTTTCTTCATTCACAAGAAAATGCGAACAATTGTCATTTTAGGCGCCATCAAGAAAGAGAACGATGGTGCCACTCCCATGGGAGACAAAATCACGATGCGACGGCGAAAACGACTCTATTTGCAGGCCGACTCCCGTTGAGGCGCAACTTGCCGACATCGAAGGAGCT # Right flank : CGATGAATGAGACTCTTTCATCGAGGCGATGCCATGTTGACCGAAAAAATCGGCGAGACTTACAGCGAGCTGCCTGAAGCTGTGAAGCCGGCGCTCCTGGCGCTGTCGATCCTGATCGACCGGATCGGATCGCTGCCGAAGGCCGACCGCGACGACCTCTTCGAGTTACTGCAGGAATGGCAGAAGGCGGAGACCCCTGAGGATCAGCGGAGTGTTCAGCGGGCCATGGAGGAGATCTTGGCCCAGGTCCCGGTCACGACGAGGCCATTGCCGTTGAATGACTCGGCGGCAATGTCGCCAAGCTCGAAGACATGGGCCGAGCACGTCGGGAAAGCGATCCGCAAACTGCGGTGTGACTTGGGTTGGACTCAGAAGCAGTTGGCCGAGAAGGCTGGGCTTCCTCAGAGTCACGTCAGCCGCCTGGAGAACGCGGAGTACACCGCGACAAACTTGACCCTGACGAAAATTGCAACAGCCTTGGGGGTCGAGGTGAGAGCGAT # Questionable array : NO Score: 3.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:-1.5, 6:0.25, 7:-0.04, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCATCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 5282043-5278274 **** Predicted by CRISPRDetect 2.4 *** >NC_019892.1 Singulisphaera acidiphila DSM 18658, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 5282042 37 100.0 38 ..................................... AAGATCCTCGGGACCAGGTGATAGCTACTTGCAATCCC 5281967 37 100.0 37 ..................................... CCAGGCCTGGACCGGTCCCTTGCGGCTCGGGATCGCC 5281893 37 100.0 36 ..................................... GTCGACTTCGACCAGCGTGCGAAGGGCGATATCGCC 5281820 37 100.0 36 ..................................... TGAGAACGCACGAGTTCGCCGAGATCGAGGACGAAA 5281747 37 100.0 35 ..................................... ATCAGTTGAGCTCCGGGTTGGCATCGGCCTGGTCG 5281675 37 100.0 37 ..................................... CATTACGGCAGGCTGCAACCGCACGCTGCTCCGAATC 5281601 37 100.0 38 ..................................... GATCGGCCTGTCACGCGAAGCACTGGTCGCTCGCTGAC 5281526 37 100.0 36 ..................................... ATGGTCAGGCCGTGACAGTAGTACAGCCTGACGACA 5281453 37 100.0 35 ..................................... GTTAACCCTATAACGACGTTATAGCCGTCGTCTTG 5281381 37 100.0 35 ..................................... GTAAATCTCCAGATCTTGTTAACAGGATAATCGCC 5281309 37 100.0 36 ..................................... TTGACCATCCCGATCCGTGCCAACCTCGACTCCGGC 5281236 37 100.0 35 ..................................... CACAAGCCCCGCAAACCTGTCCCGGAGGTGTCTGT 5281164 37 100.0 36 ..................................... TGCACCCGCTTGGTCAGCTCGGGGATCGAGTCCCCG 5281091 37 100.0 35 ..................................... GGCGCTTGGCATGCCAAGCTGGGTGATGCCGAGAA 5281019 37 100.0 37 ..................................... GCAGCCCTGAACCAAGTAGCGGTCACCCTGGAGCGAC 5280945 37 100.0 37 ..................................... CACACGTACGCCGGCCTGAGTCAGTTCCTCTTCTCCT 5280871 37 100.0 38 ..................................... GCGTCTTCACGCGCGGCCAACGGCTTGCCGACCAACTC 5280796 37 100.0 35 ..................................... TAGTTCTTCTCGAGCCAGGTCTTGTCAGCCAGGCC 5280724 37 100.0 36 ..................................... GCCACAACTCGGCCAACGTCGCTGCCTGGCCGCATC 5280651 37 100.0 38 ..................................... TTTCCTGGTTTGAGCAGGTTTCGACATGGACCCTGGAA 5280576 37 100.0 36 ..................................... ACATCGCTCTGCTACGACGAGTGGCAATACGCGGTC 5280503 37 100.0 37 ..................................... AATGTGCATCGCATCCGCCTTCAGTGAGAGGAGCAGG 5280429 37 100.0 37 ..................................... GACTTCGATCTCGATGTTCACACCGTAGAACTTTCCC 5280355 37 100.0 36 ..................................... TGATTACGCCAAGAAGACGGCAACTCTCAACCTGAT 5280282 37 100.0 37 ..................................... GGGGGACTCGATGGGGTCGAGGACTCTTCCAGCGGCG 5280208 37 100.0 37 ..................................... GCCGGCTGCTGCTGTCCTCCAGATTTTTCCCAGCCTC 5280134 37 100.0 34 ..................................... ATTTCGAATATTGTGGGCCGGATCCTCGGCCAGT 5280063 37 100.0 39 ..................................... TCGGCGATGTAAGCCTCGGCGTTCTGCTGCACCTTTCCG 5279987 37 100.0 35 ..................................... GTCGAAGCCTTTTAGAACTCTCTTCTCCAGATCGG 5279915 37 100.0 34 ..................................... ATTGTGCGTCCGTTGAGGTAGCCGGCTTGAGCTT 5279844 37 100.0 36 ..................................... CGTTCCATGCGGTATATACAGCCGCGCCCGACGCGA 5279771 37 100.0 35 ..................................... TCGAGGATCCCCGGGTTGTGGTCCGGCGAATTGTT 5279699 37 100.0 35 ..................................... AAGTCACGCCGGTCGATCTGGACGGCCAGGTCTCG 5279627 37 100.0 38 ..................................... CGCTCCACTGACACTCTGACCCGCAAAGGGATGGCGTG 5279552 37 100.0 39 ..................................... CTGTGCAAAATGTGGTTGTTGCCGCGTTTGTGACGCCGT 5279476 37 100.0 34 ..................................... GGTATACGAAACCGTTGTTTGGAGCCGAAACGGC 5279405 37 100.0 36 ..................................... CTCCACACCAGCGGACAGTGGATTGCGTCGGAGCTT 5279332 37 100.0 36 ..................................... GCTATCCCGAGGGCCTTTTTGAAATCGTCCAAGTGA 5279259 37 100.0 36 ..................................... TTGCGTAGCCTTTTTCAGGGATGTCACGGCAGGAGC 5279186 37 100.0 36 ..................................... GTGACGACAACCAACCAGGCCACGCGAGCATAAAAG 5279113 37 97.3 38 ........................A............ AACCCAGCCGGGGATTACTCCGTCCACCGAGGTGTGAC 5279038 37 100.0 34 ..................................... TTGTTTGCCGGATCGAGGGTCCATTTCGGGTCCT 5278967 37 100.0 36 ..................................... AATTGAGCGGCCTCTTCCGGCTCCTCCGCGAGGCTG 5278894 37 100.0 36 ..................................... ACTCTATTCCGACTCGGCCAGGACGCAACGTTGAGC 5278821 37 100.0 35 ..................................... CTTTGTTGCTGAGCTTTTCGGATGCCTGTGCAGAC 5278749 37 100.0 37 ..................................... GTGAGGATATTTCCGGAGATCCGCAGATTCTCGGTCA 5278675 37 100.0 36 ..................................... GTCGACATGCCAACTTTACAGGCCATGCATTACTCT 5278602 37 100.0 35 ..................................... CAGTAGAGTTTCTTGCCCGCAGCAGCGGTGACGTC 5278530 37 94.6 36 .................A......A............ TTGTGCAAGTCGGGATCGTTGGTGTCGATGCCCACC 5278457 37 94.6 38 .......T.........A................... ACGATCACGTACGCTGGCCAGGAGCCCAAGCCGTGAAC 5278382 37 97.3 35 A.................................... GCATTCTCGCCCCGGTCGGTCGGCTCAACTCCAAA 5278310 37 89.2 0 ............T....A...............G..G | ========== ====== ====== ====== ===================================== ======================================= ================== 52 37 99.5 36 GTCTTCCACGGCCTCCGGGCCGTGGCCCCATTGAAGC # Left flank : CACACGTGTCCCAATGACCTCTCATTGGTTCGGAAATCCTTGACGTGGATCGCGGGCGGAGAAGATACTCCATGACGTGACGGCGAGGACGAATCTTCGCCCAGGATCGGAGGGAACCCGCGAAGCCCCGTCGTCGTCCATCCGGCCCCGGCGAACCTCAGCCGCATCGACTCACGCCTCATGGGTGCCTCAGCGTCCGGCCACACCTGGGGAACGACCACCCCAAGGGCCCCAGCGCAGTCCTTTTGGCAAAGCCGACAGCCGCGAGCACGTGGGTCATGAAATCGGCCCCTGCGCACCAATCAGCGTCAAGCTCTTTGACAATCAGGAGTTGGATCAAATATCACCGCCAACCCCCTCTCGCGTGCCCGAAACGGTTTCACCCAACGCATTTCGGGCAACGCGACTTATCAACACGCCCGAGTGATCGAGCCATTCGAAGCCACCTCTCGCGGGATCGTGGTTAACCCCCTCTCCCCCAAGAGGATCGATCGCCGGCC # Right flank : CGGAAAAGGGGAGCAAGAGCCGCCCGAGTGGGGATCATCAATCCATCGGCTCCTGCCCCTTTTCCGTTTCGTTATTGATCGGCTTGCGACAAGCTCAAAGCGTAGCGCCCGAACAAGAATCGCCATTTTTCATATAATGATTACACAATTAAATGATCGCTCGATTCGCCGTCGTCATTCTTGCGTCGCAATGGATCGCTTGCCTATGCGCCTCGGCGCAAAGCCACTTGGAACCCGAGAACGGGATCCTCAACGCAACCGACTCGACGTGGAACTCTTCGAAGAGAATTCGTGAGGTACTGCTCAAAGAGGCGACGTATTATCATCTGGCGCGCATGGTCTGTCTCCCCTCATTCGACGAGCCGGAGTGGGTCGTGACGGTCGTCCGACAGGATGGAGAGGAACTCGATGCCCCTCATACCTACTTCGTGGAATACGTGGGCGCGGAAACGAAGCTTTTTCTTGCGAAAGGCGCTCAGGACGTCCAGGTGAAGCGGTCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCACGGCCTCCGGGCCGTGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCATCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.50,-17.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 5297045-5291568 **** Predicted by CRISPRDetect 2.4 *** >NC_019892.1 Singulisphaera acidiphila DSM 18658, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 5297044 37 100.0 35 ..................................... GTGGCGTCTGGGCTGCAAACCATCGAGAACGCCGC 5296972 37 100.0 35 ..................................... CTTTGCGGCCTCGGTGGCGTCCCAGGTGGCGTCCC 5296900 37 100.0 36 ..................................... TTCGCTACCTTGTTAGGGAAATAGATTCGCCCGCTC 5296827 37 100.0 36 ..................................... ACCCTGGGGAAAGCCGGTCCTGCCACTACTGTCCCG 5296754 37 100.0 36 ..................................... AACCTGGTATGTCGAACCGGCCACATAGCCGTTGGC 5296681 37 100.0 41 ..................................... GCCATCGGTCGTCACCACAATGCGCCCCTCCGCGACCTGGC 5296603 37 100.0 37 ..................................... CCGAAGGTGCTGCCCGGCAGGAACTGCTCGCCGAGGC 5296529 37 100.0 37 ..................................... ATGTGGCCGCCGATTCCGAGCGACCTCATCCGGTGAA 5296455 37 100.0 39 ..................................... GGGGTTGCTGTTCTCTTGTTCCCTTCCGGGCCCACCCGG 5296379 37 100.0 35 ..................................... GAAGGGGACGCCGGAACCCCTTCGGGAACCAACAC 5296307 37 100.0 37 ..................................... TCGGGAGGCGCAGGATCAGGAGCGGCCGGCAAGGCGA 5296233 37 100.0 36 ..................................... TTGCTCGTGCAAGTGTCGTCACCTTCGTCCCAGTCC 5296160 37 100.0 37 ..................................... CCTCAGTGTCGAACACCCCGACCACGGCCTCGGGGGT 5296086 37 100.0 36 ..................................... AAAGGCCGACCTCGCCCTTGCCGCAAGTACTGCGGG 5296013 37 100.0 40 ..................................... GTCTCTCGTGTCGCCAGTCCGTTGCTCATGACGCCTTCGC 5295936 37 100.0 37 ..................................... TCGGCATCCCGGCGGCGACGTGCATCCCGGCCGCGAC 5295862 37 100.0 37 ..................................... AGAGACCTGCCCAAGCCGGGCGATTTCAGCAAGAGTA 5295788 37 100.0 38 ..................................... ACTAAATCGGGCGATCATGTCTTACGACGGCTCATCAA 5295713 37 100.0 36 ..................................... TGATCCCTTGGGGACCGCGATTTGGATTGGGGCTGT 5295640 37 100.0 37 ..................................... ACTTCCTGTTCGCGCAAACACTCCAGCACGATCGGCG 5295566 37 100.0 38 ..................................... TCTCGCCCGTCCCGAACGACTCCGTTCCGTGGTCACAC 5295491 37 100.0 36 ..................................... GGGCTTGCCGTTCTGGCCGTGGGCCGGGTTGTTCCG 5295418 37 100.0 37 ..................................... CCCACCGCACATGGTCAACGTGTATACCGGGTCCGAT 5295344 37 100.0 37 ..................................... TTCCGGTGCCCTGCCTGGTCTTTTGACCGGTAATCGG 5295270 37 100.0 36 ..................................... GTCGGTCCCCTACTTCGTACCCGACGAATCAGCCCC 5295197 37 100.0 37 ..................................... TGCGAATTCCCCATAAATTTGTAGTCAAATTAGTTGA 5295123 37 100.0 39 ..................................... CATCCGGACAGCGGAGATCGGCACGCGGGCCGCCTCGAG 5295047 37 100.0 36 ..................................... CACGATCTGGGCCGTCGGGACGAGTGTGCGATTCAC 5294974 37 100.0 39 ..................................... CGGTAGAGAGTCTGTGGGCGTCGAGTTTCGACCGGCCAA 5294898 37 100.0 35 ..................................... TCGTCCTCGACCCACACAGCGACGTCACTCCCGCC 5294826 37 100.0 36 ..................................... TGATCCCTTGGGGACCGCGATTTGGATTGGGGCTGT 5294753 37 100.0 37 ..................................... ACTTCCTGTTCGCGCAAACACTCCAGCACGATCGGCG 5294679 37 100.0 36 ..................................... ATAGCTGACCGCGTAGTACCGACCGATCTCGGGGTC 5294606 37 100.0 36 ..................................... TAGTCGGTGTGCCGTTCGCCCGGCGTCGGCATCCAG 5294533 37 100.0 38 ..................................... TCGAGGAGTTTCTTAAAGCCCTCGGAGGTGTCGGCAAC 5294458 37 100.0 36 ..................................... AAGTTGTACTCCGAAATTCTCAACGACCGGAAGGTT 5294385 37 100.0 35 ..................................... AGTTCGCGGCCGTCAAGCGCGGCTCTAATCGCAAT 5294313 37 100.0 37 ..................................... ATTCCGCAGCCGCAGTCACCGAATTCCATCTCGGATC 5294239 37 100.0 36 ..................................... CTTGCCCCTTGTCGATGTAAGACCGGGCTAGTCCTT 5294166 37 100.0 38 ..................................... GGCATAGCTCTGCATCTGCTTGGCCTTGGACGGATCAA 5294091 37 100.0 36 ..................................... GAGCGCTGCAGCTACCTGTTCGCCTAGGGTTTTTCC 5294018 37 100.0 37 ..................................... TACATTTTAACATTCTAAGAATCCTTGGGGGTTTCTC 5293944 37 100.0 36 ..................................... TCCCATGATTACTTGATTGTTAACATCCATCCCCCA 5293871 37 100.0 36 ..................................... CGATCACAGCCGCTTCGCGACTGCCTCGATCGTCCC 5293798 37 100.0 35 ..................................... CCGAACTGGCCGGCGTCGACGACCACGGACGGCAG 5293726 37 100.0 36 ..................................... GCTTCCATGGCCGCCCGCGTTCGAGCCAGCTCGCGG 5293653 37 100.0 36 ..................................... GTCACTCGGAAAGTCACTCGGCCCGCACTTGTTATC 5293580 37 100.0 36 ..................................... TCCTCGCTGGTGGCGCCAGCGATCGCGGAGAGCAGG 5293507 37 100.0 37 ..................................... CCGCAGGCAGTCAAATTTAGCCTGATTTGAGCCCTTG 5293433 37 100.0 35 ..................................... TTCTCTGCCGTCGCTCTAACGCGAGGCTGGATACT 5293361 37 100.0 39 ..................................... GATCGAGATTTCGGCCCCGTCCTCTCTCTCCCAAGTGAA 5293285 37 100.0 37 ..................................... GGGGAAGTCAGTGACGGTAATCGCGCCACTGTAGGAC 5293211 37 100.0 36 ..................................... GGATCTCAGGCGTGAGCGAACTCACGCACGTCGGGC 5293138 37 100.0 37 ..................................... AAGCTTGGCCTGGTCCGGTCACCGTGCCCCTGGGCGC 5293064 37 100.0 37 ..................................... CGGTGATTGCGAGAGTGTGCGAATTCCGCAAGCCGCT 5292990 37 100.0 35 ..................................... TGGTCCGAAGTCGCGTGGTGCCCTGGTCTCGATCC 5292918 37 100.0 35 ..................................... CACTCCATTGCCGAGAACGCTTCCTGGACGATAAA 5292846 37 100.0 36 ..................................... ACGATCAATGCCGAAGCAGTGAAATCCAGGTCGATC 5292773 37 100.0 35 ..................................... TCGCCGTTGACGTAGCATTCGATCGTCTTCTCGAA 5292701 37 100.0 34 ..................................... CGCAACAGCTTCCCCGATGTTTCGGGGCGACACC 5292630 37 97.3 36 ....................................A ACGGCGATCTCCTCGGCGCTGCGCGGCGAGTTCGAC 5292557 37 97.3 36 ....................................A ATCTCTTCTGCCCTCTTCGTTTGGCCCCGTGGCACG 5292484 37 97.3 36 ....................................A CGGCTCGACGATCGGCCGGGGATTGGGATCCATTGC 5292411 37 97.3 37 ....................................A CTCATCATCACAGGTGATGAGGTCTTGTTTAAACTGA 5292337 37 97.3 37 ....................................A ACTTGGGGTCAATGAGAAGATCCCCGAGGGCACTGGG 5292263 37 100.0 35 ..................................... CCAGCTTGCTTGTTGACACTGCGGCCGTGCCGGCC 5292191 37 100.0 36 ..................................... GAGGCCCTCCTTGATCGAGTGAACCCAGGACACCAT 5292118 37 100.0 37 ..................................... GCCATTCACCGTATAGGCTGTTGAGCCATCAGCGAAT 5292044 37 100.0 37 ..................................... TACACCCGGATTCGCCATGTCGACCTGATTTCGACAA 5291970 37 100.0 36 ..................................... TCTTATCTTATTGCGTTATTACAACTACATAATGAT 5291897 37 97.3 36 A.................................... GCCGGTGAAGTCGGTTCGGGTCGACGGCGCTGTTGG 5291824 37 100.0 36 ..................................... GGAGGGCCGCAGGGTAAGTGCCCAGGATCGAAGCAG 5291751 37 100.0 36 ..................................... TGTCGCCTCGCTGATCGCAATCGCGTCAGCCCCGAG 5291678 37 100.0 37 ..................................... CAATATTCGAGCCATTACAAGAGCCTCCTTTGCGGAC 5291604 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 75 37 99.8 37 GTCTTCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC # Left flank : GTCACGCGTGCCCCAATCACCTCTCATTGATCCGGAAAACCTTGACGTGGGTCACGGGCGGAGAAGATACTCCTTCGTGACGGCAAGGACGAATCTTCGACCAGGATCGGAGGGGGGAGAAGCAAAGCCCGGCCACCATCCGGCCAGCCTCGGCGAACCTCAGTCGCATCGACTCACGACTCATGGGTGCCTCAGCGTCTGGCCGCACCTGGGAGCGCCCCCCAAGGGCCCCAGCGCAGTCCTTATTTGCAAGGCCGACAGCCGCGAGCACATGGGTCATGAAATCGGCCCCTTCGCACCAATCAGCGTCAAGCTCTTTGACAATCAGGAGTTAGATCAAAAATCACCGTCAACCCCCTCTCGCGTGCCCGAAACCGGTTCCCCAAAAGCCGTTCGGGCAACGTGACTTATCAACATGCCCGAGTGATCGAGCCATTCGAAGCCACCTCTCGCGGGATCGTGGTTAACCCCCTTTCCCCCAAGAGGATCGATCGCCGGCC # Right flank : GTAGATCCAAGGCTTCACGTGCGTGGCGGCCGTCGGAGTCTTCCACGGCCTCCGATCTAATACGCACATAAAAACATAATACATTACAATAAATTCACTATCACCTATTTCTAATGACAATCTGCGTCTGTTGGCCGTCTTGTCGTGGGGTGGCCCACTCGCTGGCGAGAACGCTCGCCAGGGGCATGACTGCTTTTGCCAGCCCCGAGGAACGCTGACGGAACAACTTCCTCATTTCCTGGGGGGATGGGTGGTCCGATTTCGGGAAATCGTTTCTTTGGCGTTCCAAGGGGCGACCGTTCTTAGCCAAGGGCGAAACCACTGAAAATTAACATAATCTCAAATTTTCATGAATTGCAGCCCCGAAGGGGCGACCGTTTCTAGCCAGGGGTGAAACCCCTGGAAACAGGATGAACTCAAATTAGTATGAATTGCAGCCCCGAAGGGGCGACCGTTAAAAGCGTTAGGCTCATTCAGATGGTCGCCCCTTCGGGGCTGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCATCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-14.50,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 5322403-5318065 **** Predicted by CRISPRDetect 2.4 *** >NC_019892.1 Singulisphaera acidiphila DSM 18658, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 5322402 37 100.0 35 ..................................... GAGAATGAGCGGCTGCGGCTTGCTGGCGGCGACAT 5322330 37 100.0 34 ..................................... ATGAGAGGCGAGCGGAATTGGACGCTTGCCTCGG 5322259 37 100.0 35 ..................................... ATGTGTTGTGCGGCCGGCATCAGCCTGCGTTTCAA 5322187 37 100.0 37 ..................................... GCGGCCTTTGCTGTCTTATTGAACAGTATCGCCGCAA 5322113 37 100.0 35 ..................................... GTCCCCTATTATTGTATTTGTGTTCACATCCAGAA 5322041 37 100.0 36 ..................................... GACCCACCGCGCACTGTCGTCCACGAGCAGGCCCAG 5321968 37 100.0 37 ..................................... GACCAACGATCATGGCTACCCAACACTCCGAGCTCTT 5321894 37 100.0 37 ..................................... GACACCGAGGATGGGCAAAGCCGCGGACTCCCACCCG 5321820 37 100.0 35 ..................................... CAGTCTTCGCGGCTTTGGCGTGTCCACCCGCCTTG 5321748 37 100.0 36 ..................................... TCGCCTCGCGCCGATTCCACCGCTGTGAAGCTATTC 5321675 37 100.0 38 ..................................... TTGAGGGAATAAGTGATTATGTTCCGCAATGGACCATA 5321600 37 100.0 38 ..................................... CCGTCTACGGAACGAGCGGAATTCCCGCACCCGTGGTT 5321525 37 100.0 35 ..................................... GCCGCCCGATTCTTCGATGAGGGCGAAAATATCTC 5321453 37 100.0 37 ..................................... GCGCTCTTGCCGAGGAGAATTTCCAGTCCAGCGACGC 5321379 37 100.0 35 ..................................... TGCGATTTGATGGTCGACCAGGGCGATCATGTTGG 5321307 37 100.0 37 ..................................... TCGGTAATCGATGCGATATCCGCCTCGGCTTCATCCA 5321233 37 100.0 36 ..................................... GTTTCCGTGCGTCGCGACCGCCCCGGGCGTGAACGT 5321160 37 100.0 37 ..................................... CACAACACCAGCGACGTAATTTGGCCTGCCCGACCTC 5321086 37 100.0 35 ..................................... TTTTAACCCCTGCTCGACCAGGGACTTGATTTCGT 5321014 37 100.0 36 ..................................... AGCCCGAATTCCTTGGCCAATGTTTGCTGAGCTTCG 5320941 37 100.0 36 ..................................... CGGTCGCTGAATCGCTGCAAGAGGACCCCTCGCAGG 5320868 37 100.0 37 ..................................... GCTGGCAAGGCCGGCAATTTACGCGCTCGCTCGATAC 5320794 37 100.0 38 ..................................... CTGAGTGAAGATGCCGCGGTCGGTTGATCCCTACTGGA 5320719 37 78.4 18 .......................TT..TT.CC.TT.. CCCCCAGTCGTGAGGACG GT [5320690] Deletion [5320665] 5320662 37 100.0 38 ..................................... CTGAGTGAAGATGCCGCGGTCGGTTGATCCCTACTGGA 5320587 37 100.0 35 ..................................... CGTCAGGGTGTGTCGAAGTCGGCGTTCACCAGGTC 5320515 37 100.0 36 ..................................... ACCGACCAGGGGAGCCCGCGCTTCGCGTTCAGGATC 5320442 37 100.0 35 ..................................... CTCGGCTTCCGTGATCGGCTCGGCTGCCGTCGGCG 5320370 37 100.0 36 ..................................... TCTCGTCATTTCGAGAGGCACGCCTTCAACGCTCTG 5320297 37 100.0 38 ..................................... ACGCAGATGTGGCCGCTTGCGCGACCACTCCCGGGCGA 5320222 37 100.0 36 ..................................... TTCCGTCTGGTGCCCCATCCAGGCATCAATAATCCG 5320149 37 100.0 35 ..................................... TCATCCAGTCTTCCGTGAAGGCCCAAGTCAAGGCA 5320077 37 100.0 35 ..................................... ACGGGTGGAGACACTCTGACGTTCAGCCGGAAGGA 5320005 37 100.0 37 ..................................... TACGGGAGTTGGATTCTGCGGCCACTACCGGCCTCAA 5319931 37 100.0 36 ..................................... GCGTCAACTCGATAATCTTACCCGTCCGAATCTCGC 5319858 37 100.0 38 ..................................... GTCTCCGAAATCTGGCTTAAATCTAGCTAGTGAATCAG 5319783 37 100.0 35 ..................................... TCGTTCGTGCTCGAGGCCGGTTTCGAGCCGAAGGC 5319711 37 100.0 37 ..................................... GGCGCTTACTCCGGCCTCATCATCACCGGCAACGTGC 5319637 37 100.0 38 ..................................... GATAGCGCGAGCGTGCAGGATAATCTCACGCCTGGCCA 5319562 37 100.0 37 ..................................... AATCAACGGCAACACCCTGACCGTCCAAGCCAATTTC 5319488 37 100.0 38 ..................................... CCGGTTGCGATCGCGGCCCGAAGTGCCAGCGTGTCATC 5319413 37 100.0 36 ..................................... GCGGCGCGGGCCGACTCGTTATCCGCGATCTGCTGT 5319340 37 100.0 37 ..................................... GCAACATGGGGTCGATGCCCAACCACTTGGACGACTC 5319266 37 100.0 36 ..................................... ACCGCCATCGAGAGCCATATCCCGCCGACCCATACC 5319193 37 100.0 36 ..................................... TCCATCTCGCCACGCCAGTTAACCCAAGGCCCAGAC 5319120 37 100.0 35 ..................................... TTCCCGACTAATTTCCCAGTCTTTTGCGAACCCGT 5319048 37 100.0 36 ..................................... CATCTGGCCGGCGACGCGCGATCGACCTGCTACTTG 5318975 37 100.0 36 ..................................... TTCTTGGGTCGGTGGATACTTTCCGCCCATCATCAT 5318902 37 100.0 35 ..................................... GCGTAAGGATCAGAAATCGGGATTCTCAGACTGGT 5318830 37 100.0 37 ..................................... GACCCCGGCAGGTGTAACCTCGGCCGTCCAATGCTCC 5318756 37 100.0 36 ..................................... TTCGGCCGCCTTGTCTCGCCATGCCGCGAACCCCTC 5318683 37 100.0 36 ..................................... GATGTAATGCTTCGTGTGAGCGTCCACGGTGTGGAC 5318610 37 100.0 37 ..................................... GCCGGGCATGATGCGTTTAACTAATCGCTTAAGCTTT 5318536 37 100.0 36 ..................................... ATTTCCTTGCGGAACGCGTCGATCGACCGTTGGAGC 5318463 37 100.0 35 ..................................... GTTCTCAGCTGCTTCTTGCGGTCCTTAGCGGCCTG 5318391 37 100.0 36 ..................................... ATAAACTCGCGTGCAAATGTTTTTGTGGCGTCTCGC 5318318 37 100.0 35 ..................................... GCCTGCTGGTGTTGCATGCGATTTTGTGCAGCGAC 5318246 37 100.0 36 ..................................... TGGTATCGTTCAGCGTTGGCGGCAACTTCTAAGGCC 5318173 37 100.0 36 ..................................... ATGAGGCAGCTTGTCGTCATCAATGACGCACTCCTG 5318100 36 91.9 0 ...........................T-....G... | ========== ====== ====== ====== ===================================== ====================================== ================== 60 37 99.5 36 GTCTTCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC # Left flank : CGCGGGTCCCATGCGATCGCGAAGGATTCGAAAAACCTTGACGTGGGTCGCGGGCGGAGAAGATACTCCTTACGTGACGGCGGGGACGAATCTTCGCCCAAGATCGGAGGGGGGAGAAGCAAAGCCCGGCCACCATCCAAACCAGCCTCGGCGAACCTCAGTCGCATCGACTCATGTCTCATGGGTGCCTCAGCGTCTGGCCGCACCTGGGGAACGACCACCCCAAGAGCCCCAGCGCAGTCCTTTTGGCAAAGCCGACAGCCGCGAGCACGTGGGTCATGAAATCGGCCACCGCTCACCAATCAGCGCCAAGCTCTTTGACAATCAGGAGTTAGATCAAAAATCACCGCCAACCCCCTCTCGCGTGCCCGAAACCGTTTCCCCCAAAGCCATTCGGGCAACGCGACTTATCAACACCGCCGAGTGATCGAGCCATGCGAAGCCACCTCTCGCGGGATCGTGGTTAACCCCCTCTCCCCCAAGAGGATCGATCGCCGGCC # Right flank : CAAAGCACTCGCACAACTGGCAGGGCGCGAGCCGTGTCTTCCACGGCTCATCGACGCACGCTTGATGGGCCCGGTCGGCGGCGGCATGATGGAAAGAACATGGGGCGGATCACCTCGCCGGGAGTCGTAGCCAATGAGACGCACGCTGACGGCCCTTACTCTCCTGCTCGGCCTACCCCTTTCGGTGGTCGCTTGCTTGTGGGACAGGGACACTCCCGCCGACGAGGCCAAGGGGATGCCCGAAGTCGTCGCCGTGCTCACCGGCAGGTTCGAGAGGAATCCACCGCGGTTCTATGAGATGCGGCTGGCTCGCGTCACCGCCCAGCTTGAGAGCCACCCCGAGGACCTCGCCGGCTACGACGACGCCGGGGTCGCCTGCGACCGCCTGGGACGCGGCGATGAGGCCATCTCCTGGATGGAGAAGAAACAGACGCAACTGGAAAAGCACGAGGACTCGCTCCCGGAGGTGAAGGAACAACGCTATCGGTATCATGCGAATC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCATCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-14.50,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //