Array 1 2312-4891 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFSJ01000014.1 Shewanella sp. LC2 00077.ordered_NZ_CP022089.1.76.27286, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 2312 37 100.0 34 ..................................... CGTAGCATTTCAACCCCGTGAGCAGCGAGCTGTG 2383 37 100.0 33 ..................................... TTATAAGCCATTTACGCATTTCCTTTTATTAAA 2453 37 100.0 32 ..................................... CTCAAATGCGAACTGGTCTTGCAGATACTTAG 2522 37 100.0 32 ..................................... TGCCGCCCTTAAGCGGCAGTCTCTTCTAATAT 2591 37 100.0 35 ..................................... CACCTTACTTATACCGGTTTTTACGAATTGTTGAA 2663 37 100.0 32 ..................................... CTTGGCAGGCGGTGTGGCTGCCGACAGCAATA 2732 37 100.0 32 ..................................... TCTTCTTCATTTAACAATTCACCACTGACTTT 2801 37 100.0 33 ..................................... CAACAAATCAGAAACGATTTTACTTAGTTTACT 2871 37 100.0 32 ..................................... GGCTAAGCAAGCGCGGATGATTGACATAACAC 2940 37 100.0 32 ..................................... GTAGGAATTTTCCCGTTCTCAACTGTTGCTTT 3009 37 100.0 33 ..................................... ATACTTTGGATGATGTGCCCAGATGACTTCAGG 3079 37 100.0 32 ..................................... CCAGATTTGCCGTCACTTTGGCATCGTTTTAG 3148 37 100.0 32 ..................................... GCACGCCACGTACTGTGGCTATGATCTTTTGT 3217 37 100.0 32 ..................................... GATGTTAACGTGGCAACAAAGTGATTCTAAGC 3286 37 100.0 33 ..................................... AAATGGAACTACACTAACAACGACGATACTGGC 3356 37 100.0 32 ..................................... GGTGAGGTCTTGCCCGGTGATCATCAGGATAC 3425 37 100.0 32 ..................................... CATCAACCACCATATCCTTGATGCTTGTGTTG 3494 37 100.0 32 ..................................... ATAACAAGTGGCATTGAGTTATACTTTAGTTA 3563 37 100.0 31 ..................................... GCCCCAGCTGCGTTTCTGTCGCTTAGTGAGT 3631 37 100.0 32 ..................................... GTAAAGTCTTCATCCTCTGCGCTCAACTTAAC 3700 37 100.0 32 ..................................... GTAAAGCTTCTTGTGTACGATTATACATTATG 3769 37 100.0 32 ..................................... ACCGTATAGAAACTTAATCCACGGTTTTCTTT 3838 37 100.0 33 ..................................... TTTTACTGCTAGACGGTCGAACATAGGATTGTT 3908 37 100.0 5 ..................................... TGTAG Deletion [3950] 3950 37 81.1 31 ...GA.TG.GCA......................... AAATCACCTTTAAGCGCAACCCATGCCTTGT 4018 37 100.0 33 ..................................... CACGTACGATGAGTCATACGTTTGTTTTGTTGA 4088 37 100.0 33 ..................................... AGCCTTACCAGCCACCATAGGGCTTACAAATGG 4158 37 100.0 31 ..................................... CTACCATATCTTTGATGCTGGTGTTGATTGT 4226 37 100.0 34 ..................................... ATTTGAATCAGAACCGCTTCTTCCCATTCTTGTG 4297 37 100.0 34 ..................................... CATGTACCTATTCCCATTTGGATTTTGGTTACTT 4368 37 100.0 32 ..................................... TCGTAGTAATCAATAGCAGCAGGACCATCAAC 4437 37 100.0 32 ..................................... CGGCGCACTGTATCAACAGACAAATCTTCTGG 4506 37 100.0 33 ..................................... TACAGCCAACTGCTGTTGGACCTCCTGCAACAC 4576 37 100.0 32 ..................................... TTCCTCATGATAGTAAGTGGCGAATCTTTTCT 4645 37 100.0 33 ..................................... TCAAAACTTTGCCCCGTCTTTTCGTGATACGCA 4715 37 100.0 33 ..................................... TCAGTCAAATGCCTAACTGGAATGCGAACGTAA 4785 37 97.3 33 ..........C.......................... GGTATTCTTTTGAGCAGACTCAAGCTGCTTTAA 4855 37 86.5 0 ................................CTCTG | ========== ====== ====== ====== ===================================== =================================== ================== 38 37 99.1 32 CTCTCAAAGCAGCCCCGACTTATAAGGGGATTAAGAC # Left flank : CACAGGGCCATGTAGCCCTACCGGAATTTGAAAATGAGCAACCATAAATACCAATTTTTAATTTGCTACGACATTCGCGAGCCTCGGCGGTTACAAAAACTACAACGCTTACTACGCCGCCACTGCTTAAAATTACAGGCGTCTGTATACCTATTTAAAGGTAATAGCCAGGCTGGCGAATCCCTTAGGCAACAAATTAGCCAACATATCGATCGCCGACAAGATGATGTGCGGGTTTACCAGTTAAGTCTTCACTGTTTGTGTGAATTTTACGGCCTACTCCCTTGGCCAAAGGAAATATTTTATGCCGATCTGCCCGTTTTCCGCCATCAGCCACTGATTGCACATGCTGCGCAAGCAAAGTAGACTAACACTGCTCTTTAACAATTAATTGGCACTAACACGATAGACCAAGTAGCGAGCCATTTTTATGCTTAAAAATCAATCAAGCGAAATGCGTTCAAAAACATTGATTTTAAAAATAAATTTTTTGAGTTAGG # Right flank : GTTTGCAACTTATTCCTGCCAGTTTCATCTATATACCACTTACAAGTTTTTAATTGCCCTTTGTGAAGGCCTTATTCGGTATGCTTTTTACATTAGTGCATCCGCTTAAGTCACAGCGATTGACAAAACAGTGCTATTACAAGGTTTGCCCGTATGACATTAAGCCATCCACCCTCTGTTGCACTTAACCACTATATCGCCAGTGTATTACTCGAAGGAAATATCGATTGATAGCGGAAAAATCTAATGGTCGATAGATATACACTCATAACTTTTAACCTTATAAAATCATAACGTTAAAAAAAATAACAAATTTAGATATCAATCATTTTATTTGATGATGTAATCGCTTAAGCTCTGTGCTCTGGTGCTTATCACAGGGACAATTTTATAGGGATGAACATGATAAAACCGCATCAAACGTTATTACTCGCTGTCACGGGTAATTCTCCACAAATAGTCACTGAAACCTTATATGGGATATTTCAGCAACAGCTAGA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCAAAGCAGCCCCGACTTATAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.10,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //