Array 1 166342-165063 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADDLT010000037.1 Acinetobacter baumannii strain INTEC_AI6 NODE_8_length_220876_cov_166.734033, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 166341 27 78.6 29 ...-.A.....A......AG..G..... TTAATGCTTAGCATTGATTGATATGTGAT T [166335] 166284 26 82.1 30 T...C-.............G....-... TATAGGGTAATTCTGATCTTAAGTATTTAT 166228 27 78.6 32 ...AGC....AT...-............ GCCCTATTTTTCCTTTAAAAGTAATTTTGAAA G [166210] 166168 28 85.7 32 .G.........T.C.....G........ TTAGCTGACGTTGAGCATAACATCGGTATAAA 166108 28 89.3 32 ...A.....T..C............... CCGCCTCAGTATATTGATTCGTGGTCTTTAAT 166048 28 82.1 32 C..CG.......CC.............. AGCTCGTATGGAGTTGGCACTTTACGTTTTAA 165988 28 85.7 32 ...A..T.....CC.............. TAAACTACGTGTTTTAGCTTGTGGTATATTTA 165928 28 89.3 32 ...A........CC.............. GGCTTATAAACGCCTTGCCCAACTCCCCAAGT 165868 28 82.1 32 ...A.......TCC...........C.. TAAAGTGTTAGAGCCATAAACGCCATCAACCT 165808 28 85.7 32 ............CC............GG TTCAATTTTTTCAGTGATATTTTTGATATTCC 165748 28 96.4 32 ....C....................... GTTATTGTGCTCAGCAATAACGATGGGGGCGC 165688 28 92.9 32 ...AA....................... AAGCGGGGTGGGATTTAATCCAATTCAAAGCA 165628 28 96.4 32 .............C.............. ATTGATAGCCAAATAGCGCCACAACGCTTAAT 165568 28 96.4 32 ...A........................ TTGCTGGCGTCACCTTTCGCAAGGCCCCACGC 165508 28 100.0 32 ............................ ACGTCTTCTAATGGTGGACTCTAGTCCGATAT 165448 28 89.3 32 ....C......TG............... TGTCGCATCTCGCGCAGCGCTATGTTGTAAAT 165388 28 89.3 32 ...A...............G.....C.. CATATAGCACCAGTATTAATGTCTAGTTTACG 165328 28 89.3 32 ...A........CC.............. TTCTTGGGATGTGGAACTGTTACCAGCCCCTT 165268 28 92.9 32 ....C.......C............... ATATTCATGAGCGTATTCTGCTGCCGTAATAA 165208 28 100.0 32 ............................ TCGATCCGGATGGCTTTATCCCGAGCCGCATC 165148 28 92.9 31 ...A.......T................ ATAGCTTCTGGCCCCCGAAAATATCAACTAT 165089 27 85.7 0 ...T........TC..........-... | ========== ====== ====== ====== ============================ ================================ ================== 22 28 89.1 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTGCTGCTAAAACTGCGCTAAAACAATTCAAATGTTCACCTAAATCTACTCTATTTTGAGGATATGGCATGAATGAGCAACCTGTTGTTAGGTTATGAACTTCATAATCGCCATTTGCTTGCACATTTTGATTGATAATGAATTTAGACATAGTTCTTACCCTCCCCAGATCATAAGGATTGAAAGTAGCTCTACGCTCCGCTGTATAGCAGGATGAGACAAAATTTTGAAATGTTGTGCTATCATTTGGATAGTCCTTATTTAAGTAGTAATAGCTTTGAAAATGGACAAAAGCAGGTATGAAGTTTGGTCACGGAATACCTGCTTTTTTTTATGCCTTTTCATAAATTAAAATATATTTGTCCAAAATCCTTGTCAAACATTATTTTTATTTAAATAAAATTTTACTATCAATCATATCTAAGTATTAAGGGTGCTAATTTTTTTTAAATGAATTAAGTATTCCTGATTAAGATTTGTTATGATAGAACTTTTACATA # Right flank : GAGTTCCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGCTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAATTATGCATGTCATTCTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTCTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTATTGATGCTAGATGAATGGGTCAAAGTAAGTAGCTTATTGGCAGGTGCAGCAGGGGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 4.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.45, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.15, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [17-43] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 171897-175945 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADDLT010000037.1 Acinetobacter baumannii strain INTEC_AI6 NODE_8_length_220876_cov_166.734033, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 171897 29 96.6 31 ............................A ATGGCATTTGCTGCTGAGGGGGATTTCGACT 171957 29 100.0 31 ............................. TGAACACCCGATTGCACGAAATTAGCTGCAC 172017 29 100.0 31 ............................. TGACGAGTTTACTAATGATGGCTCAGCAAGC 172077 29 96.6 31 ............................A TTCTGCCACCGATGAGAATGGCGATACTATT 172137 29 100.0 31 ............................. ATCAACATCAACCACCCTATAAGAGACCCCA 172197 29 96.6 31 ............................G TTAAAACAAGACAGATGTCGCAGCGAGGTTC 172257 29 96.6 31 ............................A ATATTGAAGCTTGGCTTAGTGATTCATCAAC 172317 29 96.6 31 ............................A AAGACCAAGAGTTAAGGGCGGTTTTTGTGTA 172377 29 100.0 31 ............................. AGATTATTTGGTGACTCAAATGTTTGGTTGT 172437 29 96.6 31 ............................C ATAGCAACTGCTACAGCTGGTACTGTTTCTG 172497 29 100.0 31 ............................. TGAACAGTATTATTTCCTGTTGTGACAGAAC 172557 29 96.6 31 ............................A GTATCATCCAAAAAATAATGAGGGTTAAAAC 172617 29 100.0 31 ............................. CATTACGAGTTTTGTATTCAGCTTGAAACAA 172677 29 100.0 31 ............................. GATTCATACTTTTCCTCTACTGAATCAATAA 172737 29 96.6 31 ............................A CTTCGAGAATTTATTATTGTTGAGTCAAACA 172797 29 96.6 31 ............................A ATTAAACGTTGTTGACCTTCATCAGTCTGAG 172857 29 100.0 31 ............................. AACGGGACAAGATGCCTTCATTGTCGATAAC 172917 29 96.6 31 ............................A CCAACCACCTGAACATCATATGTCGGTATTT 172977 29 100.0 31 ............................. GAGTAGTTCAGTTGGTAGAACGCCCTAGTCC 173037 29 96.6 31 ............................A AGTAGATATTGACATTGACGCAATTAAAGAT 173097 29 100.0 31 ............................. CAACCGCAGATTTAACGCCATTTGTAGCAGC 173157 29 96.6 31 ............................A AAAGAGACATGAATATTTAGTTTGGCTTGAA 173217 29 100.0 31 ............................. AATCGATAATTTGCCCGCGTCCATTGTTATG 173277 29 96.6 31 ............................A CCTAATGATGGCTGTAACCGTATGTCTGACG 173337 29 100.0 31 ............................. TTAAAAGTCAAAGCAAACTCTTGAAAAAGTT 173397 29 100.0 31 ............................. AATCGATAATTTGCCCGCGTCCATTGTTATG 173457 29 96.6 31 ............................A TCAGAAAATTTTTATTGGGTTGTTATGATGG 173517 29 100.0 31 ............................. TTTTGAAGAGCTGCAAATGCTTCAGCTGCAG 173577 29 100.0 31 ............................. TACCCACTCTATTCAATAATGTATCTACCTT 173637 29 96.6 31 ............................A CCATGTAAACATGCATGCATAAATGCAATGC 173697 29 100.0 31 ............................. GCACAAGATTACATAGATAAAGTGCTAGATA 173757 29 100.0 31 ............................. TATTGTGCATTTGGTCGGAAATTCTTCAGTT 173817 29 96.6 31 ............................A CAAGATGCTGCTGCTTTAGAGGCTTTGGTTG 173877 29 96.6 31 ............................A ACTTGGATGACTTTGTTAGAAAAGCATCGTC 173937 29 96.6 31 ............................A TAGGAGCATTCGCAGCCCTTGGATTTCTTTC 173997 29 96.6 31 ............................C CACCCCCTTTCGCAACCGCATCAGAGTTCAG 174057 29 100.0 31 ............................. AAGTTGTCAGGGTTAATCGTTACGGAATAAA 174117 29 96.6 31 ............................A AAAGCAGAAGTCTAAGTATCTGAAAACATTG 174177 29 100.0 31 ............................. TTATTCAAAACGGCGAATTAAAAGCAGCAGC 174237 29 100.0 31 ............................. GTAGTTATCGGTGCAATTGTTGCCGCTTTAT 174297 29 100.0 31 ............................. GTAGTTGATGCTATCGAAAAACAAACTACTG 174357 29 100.0 31 ............................. TTACTTAGCAGCCCAAATTTATTCTAACAAC 174417 29 96.6 31 ............................A AAAATGTTGAATTTAGAACTTGCAATGAATC 174477 29 100.0 31 ............................. TGAGTAATGGCGGTTATCTACCATCCAGAAG 174537 29 96.6 31 ............................C TGATGCTAAGTACCAAATCAAAATCGTGGCA 174597 29 100.0 31 ............................. ATCATTCAGTTAATAGGTCATTTGGGGGCTT 174657 29 100.0 31 ............................. TAAGTGTTGCCTCAGCCTCGAGATATTTTTG 174717 29 96.6 31 ............................A TCTGCAACAGTTGTATAAGCAAAAGCAGGTA 174777 29 100.0 31 ............................. GAAATAACAACGGGTTTATTTGGGTCACCAG 174837 29 100.0 31 ............................. GAGAAGAAAATTAATGCTGTCCCCTCATTAT 174897 29 96.6 31 ............................A TTAGAACATGCTCTCAATGTTTCCGTGTTCA 174957 29 96.6 31 ............................A CACCTTCCAGTAAATCACATGAAGCCTATAA 175017 29 96.6 31 ............................A AAGAGCTGAAGCCGGAGATCCTGGTCGAGCA 175077 29 100.0 31 ............................. TTCATGCGCACAGTTTCACACCAAGCGCCGA 175137 29 96.6 31 ............................A AAGCTCATATTTTGTGTTGCACGGGCTATAT 175197 29 96.6 31 ............................A TCATCGGTGGCGTTAGCTTCAGTCATTAGAA 175257 29 100.0 31 ............................. TCGGCTTCAGAACCTCCGCCGATTGATCCTG 175317 29 96.6 31 ............................C CATTGATTACCGTTGTGGCTGTGCAATCATC 175377 29 96.6 31 ............................A CAACGCAAGAGCCACAACAATGATGTAATAG 175437 29 96.6 31 ............................C AATACAGCAGCGAAGTTTTATACCGGTGGAA 175497 29 100.0 31 ............................. TCAGGGATTTCAAAAGCTAAGCCGGTTCCAA 175557 29 96.6 31 ............................A GATGTCGTAGAAATTCTTTTGAATCCTGATC 175617 29 96.6 31 ............................A TCATAATTATTCTCAACCTTAAAGTTATATG 175677 29 100.0 31 ............................. ACGGGATGGATGGTTCAAGCTATGATTTCGC 175737 29 100.0 31 ............................. GAATTCTCTCATCTGGCAAAGACATTAAACT 175797 29 96.6 31 ............................C TGATTTATACCACGTTTACGCACTTTAGCTT 175857 29 100.0 31 ............................. TGAATCGTGGAAATTAATAACACCATGTAAA 175917 29 93.1 0 ........................AT... | ========== ====== ====== ====== ============================= =============================== ================== 68 29 98.2 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTGGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGATACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCTTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTAATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTGAACTCTA # Right flank : TTTGAATCTTAAAAATAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //