Array 1 199-21 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEAH010000235.1 Myxococcus sp. CA023 NODE_238_length_245_cov_26.839, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 198 37 100.0 34 ..................................... ATGTCGCTCGACATGAAGGAGTTGTCGGGCTTCA 127 37 91.9 33 .........T..T.......................G CTTGCTTGGATGGAGCAGGTAGAACTGACTACC 57 37 89.2 0 ........G.A.....T..G................. | ========== ====== ====== ====== ===================================== ================================== ================== 3 37 93.7 34 GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC # Left flank : GCGTGGGTTGAAACACGCAGAAGCGCGAGCCCGTCTACGACGCGCT # Right flank : CGCCCACGACGTCGTGGGTGG # Questionable array : NO Score: 3.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 96620-101129 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEAH010000024.1 Myxococcus sp. CA023 NODE_24_length_101172_cov_66.089, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 96620 37 100.0 32 ..................................... CCAGGTGCGGCAGACGCTGGCCCCGTTCGATC 96689 37 100.0 35 ..................................... CTCATGCTCGACGACTCGCACGAAACGCGTAGTCA 96761 37 100.0 33 ..................................... GTGACCGGCAGCAACACCATTACCTTCCGGGTT 96831 37 100.0 33 ..................................... GATGCCTCTGGAGCAGCTGGTGGATCGCTCGAA 96901 37 100.0 32 ..................................... GCGGCCTGAGCGCCTCTTCTCCTGGGGGCTGT 96970 37 100.0 33 ..................................... GGCGTGAACCTGGAATGGGCGTACCGCGCCGAC 97040 37 100.0 32 ..................................... ACGGGCAAACTCCTCGATTCTGAGGACTTTTG 97109 37 100.0 33 ..................................... CTCGCTTGAGGACCCGGAGATTTGGCTGCCGAA 97179 37 100.0 32 ..................................... CCGCATCCACCCAGCGCCTTGTCACAGACGGA 97248 37 100.0 36 ..................................... TCTGACGGCTGGACGGACGAGCGCGTGGAGCTCGTG 97321 37 100.0 33 ..................................... CCATTCAACGCGCCCGACGCATGGTGGTGCGTC 97391 37 100.0 35 ..................................... CTCTGGTGAGTGGCGGCTGTCTGACGCGTCATCTG 97463 37 100.0 34 ..................................... TCTGCTTCGTCGCGTTGCCAGCGGAGCACTGGCC 97534 37 100.0 33 ..................................... AGTTGCCGTCGCTGTCTGGCTCGCCTGCGCAGG 97604 37 100.0 33 ..................................... AGCCCCGGCACCCGCGCGGCCTGGGCGGCGATG 97674 37 100.0 35 ..................................... CGGTGAACACCACCTCGCCGCTGGCTGCGACGATG 97746 37 100.0 36 ..................................... ATGACAAGGCGCTGGCGCCACGTGCTCCATGGCGAG 97819 37 100.0 32 ..................................... TCACTGCCGGGCCCGCCCTACTCCAGCGGCCC 97888 37 100.0 36 ..................................... AACCAGGCGCTCACGTGAGCGCCGCATCCAAGGAGA 97961 37 100.0 35 ..................................... GATGAACCTCTCGCCGGGCCGCTCCATAACGGCGA 98033 37 100.0 35 ..................................... TCTTCGCGCTTGGCCTGGTCGGTCTTGGGCAGCCA 98105 37 100.0 34 ..................................... CATCCGCGCAACGGACGTCTGGAACTCGTCGAAA 98176 37 100.0 32 ..................................... TCTCCACTGCTGACACTCACCACGAGCGCCCG 98245 37 100.0 35 ..................................... GCTTGCGGCCCCCGGGCTCCTTTTTCCACCCCCAC 98317 37 100.0 34 ..................................... GACTCGCCCACCTCACCCCGACACCCGCACAAGA 98388 37 100.0 34 ..................................... AGGCGCTCAAGCGGGGCGTGAAGAAGCACGGGAA 98459 37 100.0 33 ..................................... TACAGCGGGGTGTGCTCTTCGCACGGCGAGGCG 98529 37 100.0 34 ..................................... CGCCCGGCTCCCCAATCTGCGGTCGACCCTCGGT 98600 37 100.0 35 ..................................... ACGTCAGGCGAGAAGATGAGGTCCAGCGGCAGGTC 98672 37 100.0 34 ..................................... GTGGACACGGGCCCCGCGGTCAATCCCGATGCGC 98743 37 100.0 35 ..................................... GGTGATGGCGTCGGGGACGAGATTTGCAGCCTGGG 98815 37 100.0 33 ..................................... AGCCCGATGCCGCGCGACTACGCTGGGCCCGGT 98885 37 100.0 35 ..................................... CACTACGCCCCGCCCGGCAGTGCCTGACGCGCCTG 98957 37 100.0 34 ..................................... GCGCTCCAGGCTGACGGGTGGTGGCTCCGCTCGG 99028 37 100.0 33 ..................................... TCCAACCGCCGGAACAACGCGAAGTCGGACGCG 99098 37 100.0 35 ..................................... ACCGGCCTGGGCTGGCGGGATGCTTCCAGGACGCG 99170 37 100.0 34 ..................................... ATGCAGATGCACGGGGCCCGGTTTCGGCTTGCCC 99241 37 100.0 34 ..................................... GGCGTTACGCTCGACTATCGAGCGGACGTTGTCA 99312 37 100.0 34 ..................................... GGAGTCTGTCGGCCGCGCTGACGCGAGGCCGGCG 99383 37 100.0 34 ..................................... GGGCGCTGGGTGAAGGACTTGAAGGGCCGCTACT 99454 37 100.0 34 ..................................... GTCGACGCCGTCGAGGCGAAGAAGCCGGCCAAGC 99525 37 100.0 32 ..................................... GTGGACTGGCCGCATGGGGGCCGGCGTCCTGG 99594 37 100.0 36 ..................................... TCTAACCTTGTCATAAATCCGCATCATCCACGTGTC 99667 37 100.0 34 ..................................... CGAAGTCCGCGCGGATGGCGTCATGCGCCTTGGT 99738 37 100.0 36 ..................................... TTCGCCTGGCCCGTCGCCTCGGCGTACCGGCGGAGG 99811 37 100.0 34 ..................................... GGCATCCCCGCGCGCAGCCACGCCAGGACGTCGT 99882 37 100.0 34 ..................................... CTGTTGTGCCAGTCGTCCGCGTCGTCGGGGGTCA 99953 37 100.0 33 ..................................... CACCACCCCCTGCGCCGGGGCGGGCGGGGGCTG 100023 37 100.0 35 ..................................... ACGGACTTGAAGTCGTTGCCGTCCATGATCACGTG 100095 37 100.0 34 ..................................... AGCCAGAGTCCAGAGCTCGACCGGTGGGGCCGGC 100166 37 100.0 34 ..................................... AAGGAGTCCGAGGTCGCCACGGTGTTCGATGCCG 100237 37 97.3 35 ..................A.................. CGTTCGGAGGGGCAGGAGCAGAGCGCCACGGCGGC 100309 37 100.0 34 ..................................... TCCGCCAGCTCCAGCACGAGTTCCAACTTCGACT 100380 37 97.3 33 ..T.................................. TTGGGGTCCGCGTTCTCAACCTCCGCAGCCTTG 100450 37 100.0 34 ..................................... TTACGCGACATGCAACGCGGCGCGCTCGACCAGG 100521 37 100.0 35 ..................................... ACCGGCGTAGAGCTGGGGAAGCACGGGCAGGGCAC 100593 37 100.0 35 ..................................... ACCGGGCGCTTCCGCGAGGGCTTCGGCGAGCTCGG 100665 37 100.0 32 ..................................... CGAGCAGTGGCAGCGCCCGTGCATCGGCCCAT 100734 37 100.0 36 ..................................... AGCGTGGAGCGCAACTCCGGGGTGGACCCGAACAAG 100807 37 100.0 36 ..................................... CCGTGAGTAGTTGCTGGACTGCGAACTCAAGCTCAA 100880 37 97.3 36 .........................A........... TACTCCCGCTTGGTGGACAACCTCTCCGGCCCCGCG 100953 37 100.0 33 ..................................... TTCCCGACGTTGGCCACCGTGTTGATGCCGCTG 101023 37 97.3 33 ...................A................. ACGCAGAAGCGCGAGCCCGTCTACGACGCGCTG 101093 37 97.3 0 ...................A................. | ========== ====== ====== ====== ===================================== ==================================== ================== 64 37 99.8 34 GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : TCCCTTCGTGATGCGCTGATGCGTAGATTGACCGTGTTGATTTGTTACGACGTGCGGGTGTCGGACCCCCAGGGGCCTCGGCGCCTGCGCAAGATTGCGCGGGCTTGCAGAGACCATGGCGTGCGAGTGCAATACTCCGTCTTCGAGTGTGTCCTGGAGCCCAAGGACTGGATCGTCCTGCGCGCCCGCCTGCTCGGCGCATTCGATTCGGAATGCGACAGCCTGCGCTTCTACTTCCTGTCGGAAGACGATGCCCGAAAGACGGAGCATCATGGCGCCAGGGCACCCCTGGACGTCGAGGGGCCGCTGGTCCTGTAGGCCTCCGCGAACCTATCCCGGTGTACGCTCCGCCGAGGGTTCGCGCTCATTGAAATCCCGAATAGAATCATGGAGTTGGGTGAGTGCGGGGCAGGAACGGCGGGGCGCTTTCGTTGCCCCGCGGGCCGGTTCGCGAAATTCGGCCGGATTCCGTAGTCAGAACAGTATGTTGGAAGGGCAGG # Right flank : ATGTCGCTCGACATGAAGGAGTTGTCGGGCTTCAGTCGCTCCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 86184-85866 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEAH010000036.1 Myxococcus sp. CA023 NODE_36_length_86230_cov_63.8456, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 86183 37 100.0 34 ..................................... ATGTCGCTCGACATGAAGGAGTTGTCGGGCTTCA 86112 37 100.0 32 ..................................... CCCGCGTACCCGCGTGATGCGGGCGGCGAGCG 86043 37 89.2 34 ...........C.TT.A.................... GTCTCCGCGGAGCTCTCCGCGTCGCCCTGACGTC 85972 37 91.9 33 .........T..T.......................G CTTGCTTGGATGGAGCAGGTAGAACTGACTACC 85902 37 89.2 0 ........G.A.....T..G................. | ========== ====== ====== ====== ===================================== ================================== ================== 5 37 94.1 34 GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC # Left flank : GCGTGGGTTGAAACACGCAGAAGCGCGAGCCCGTCTACGACGCGCT # Right flank : GCCCACGACGTCGTGGGTGGCATCAGCCGCGCCAGTCGCTCCTCGTGAACGCGAGGACTCTCTCTCTTCAACAGGTCCGAAAATTGGGGAGCAGATCACGAGGACTCGCTCGTGCTCAGGCTCCAGAAGTCACCGGGCATGCCCAATACACGGCACTTCTGGCTTGAGGTCTTCGGGGATGCCCGTTTCAAGCGCAACGGCTCGTTCCTATCCGACGTGAACGCGGCCAACGCCCATCGGCTCACGACGTTGCTCATCGCCGTGAGCCGGCTGGACGAATTCAAGGAGGATCGCAGCGCCCCTCCTCCCTTCGCACATGGCCGGCAGGTGACGACGTTCGAATTCACCGTGGACGGCCGGCGCACGGGTCTGACGTTGGACAGCGACACGCCGCCCGACATCCTCCGCTTCATGCAGCAGGAGGCTGCCGCTTACGGCATCGAACTTTGAGCGCGAGGACCCCGGGCGCCCCAGGGCCGGAGGAACACCTCCGTCTCCTC # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 175919-172654 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEAH010000002.1 Myxococcus sp. CA023 NODE_2_length_204459_cov_65.4961, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 175918 36 100.0 35 .................................... TCGTGGGTGTCGCCGTGGCGCATGGCCGCATACAA 175847 36 100.0 36 .................................... ACGCTTCCGGGTATTTCGACCTCGAAGGCTCCCACA 175775 36 100.0 35 .................................... GACAGCGCCTGCCCGTCCTTGCCCGCCACCTCGTG 175704 36 100.0 34 .................................... TACTTCTCAATCGCTTCAACCAGTTCCTCCCCAT 175634 36 100.0 36 .................................... ATATGGAGAAGCTTTTCTCGAAATTTTTCCGGGCTC 175562 36 100.0 37 .................................... TTACGGCCTGCGCTGGGCGCATGGTGGCCAGCGAATG 175489 36 100.0 34 .................................... CGGTCATCGGTCGTGTCGTAGCCGGTCAGGCGCT 175419 36 100.0 35 .................................... AGCCCGCTCTTCTCGTGCATCGCGAGGGCCCCAGG 175348 36 100.0 35 .................................... TTGTGGGCCATGGTGAGTTTCCTTTGGGGTTGGGT 175277 36 100.0 34 .................................... TCGAGTTCCGCCGACGCCTTGCCGTAGGCGACAT 175207 36 100.0 35 .................................... AACTCCACCGACTTCGAGGGCCAACCCGACTGGCT 175136 36 100.0 39 .................................... CAGCAAGCTTTGCAGTGCGGAGAAATGCCGGCGGGAATA 175061 36 100.0 35 .................................... GCCTGACCCGGCTCAGCCGTACGGGCCGTTCCCGG 174990 36 100.0 36 .................................... ACTAAGCGCAAGCCGGGCAGCAATAGACCGACTATC 174918 36 100.0 34 .................................... TAGAGGCTGAAGCGGTTGCGCTCGCCCGCGTTGA 174848 36 100.0 36 .................................... GCACGAGTCCTCGGACGGAACAGCGCAGGCGCCTAC 174776 36 100.0 34 .................................... TCTCCCCTCGCCGCAAGGCAGGGGCGGTCCTCAA 174706 36 100.0 35 .................................... GAGGGATTGCGACACGTTGCCCGTCCTGGGTCCAG 174635 36 100.0 35 .................................... AGGATCGCGTAGAGCACAGCCACCATCTCCTCCCG 174564 36 100.0 38 .................................... TGTCCTGGCGGAATGACTGCATGAACAACCCCATTCCG 174490 36 100.0 39 .................................... TCCTGTTCAACGTCGCCCGTCGCCATCACGCCTCCTAGG 174415 36 100.0 34 .................................... GCAACTGGCGCGGACTGGCGTAGAAGGAGTCCAG 174345 36 100.0 36 .................................... CCGAGCAGAACCCCGGGTAGTTGGCCTCTACGACAC 174273 36 100.0 36 .................................... TCGGAGCGCTGGCCGAAGTAGATGGTGACGTTGAAG 174201 36 100.0 38 .................................... GTCCCGCCAGCACGGGGCGATTGTCACCACCTCGGACG 174127 36 100.0 37 .................................... CGTCGGCTGCGCAGAGGGGCTGTGATGGCGGCAGTCA 174054 36 100.0 41 .................................... CCGGAATAACTCAGCGCCTTGAGTACACTTGGGTGGTCCGC 173977 36 100.0 37 .................................... TCCTCCGTCACCAGGGACAGCGCCTCCAGCGACACCT 173904 36 100.0 37 .................................... CCCTAGCAGGTACCACGACGCACTGACACCCCATGGC 173831 36 100.0 36 .................................... TCCCCCATAGGCTTCAGGGAAACGGTCACGAAATTG 173759 36 100.0 33 .................................... TTCCTGGACCCCGCTGGCGCCGCCGAGGTCAAC 173690 36 100.0 36 .................................... AAGGTAGTCACGGCTGCGTCGAGCAGCTTGGCGAGT 173618 36 100.0 33 .................................... GTGATGCGCCGACGCAGCGCCTCTTCTTCACAA 173549 36 100.0 33 .................................... TCCTTCCGCAGGCGCACCAGACGTTGCAGCGGC 173480 36 100.0 40 .................................... ATGCTGTCGAGTCGCGACAGATCTCCGGCGCCGATGGTAC 173404 36 100.0 34 .................................... TCGTCCCGTTGCACGAGATCCGCGACGAGGAGAA 173334 36 100.0 36 .................................... CTGACGCCCCTCCAGTCGAAGAAGGGAACGAGCGTG 173262 36 100.0 37 .................................... ACGTCGGCCACCTCCCCAAATGCGTCAGCCGTCGTCT 173189 36 100.0 35 .................................... GCGGCAAATCCTCGCGGACGTGGCGCTGGAGATTC 173118 36 100.0 36 .................................... AGCGGTGAGTGCGCCTGCGTCGTGCCGTCCTCCAGG 173046 36 100.0 35 .................................... GCCCGGAACCGACGCGAGCGCCGCCAGGCACAGCA 172975 36 100.0 36 .................................... CCGGCCTGGGCGGCCTGCACGCGACCCCCAAGGGCA 172903 36 97.2 37 ...........T........................ GTGACGCCGTCCGCCGCCCAACCCTCCAGTCCGCAGT 172830 36 100.0 36 .................................... AACCGCTCGCTCTTGGTCATCTGGGTCATGGTGACC 172758 36 91.7 33 ...TT....T.......................... TCCTTCCGGCAGTCGCAGTTCCAAGGCTTCATA 172689 36 88.9 0 A.............................C.A.G. | ========== ====== ====== ====== ==================================== ========================================= ================== 46 36 99.5 36 GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : CGACCCGCGGCGGTGGCGGAAGGTGTATGCCCTGCTGAAGGGATATGGGGAGTGGTTGCAGCTCTCGGTGTTCCGTTGCTCGCTGACGGACCGGGACCGGGAGAAGCTGCGCTGGGAGCTGTCGCGGCGGATGGATGCCGTGGATACGTTGTTAGTGATTGGGCTGTGTGGCGGGTGCGTGGAGCGCGTGCGCGCCATCAACGCGAAGGAGGACTGGCCGGAGGAGCCCGCACCGTTCAAGGTGCTGTGAAGCAGGCGACAATCAAGCACCTCGCCGTGGCGGAGACCCGCAGCGGCGAAAACGGCGGATTCCTTTGTGATTTCATAGGGTTGGGGCTCTTTGACAGGTGAATAGGTGCATGATCGATGAAAAGCCGAGTGGTTTCATAGGGTTGGTGATTCTGGGTAGGGCCTGGGACGGCCAACCTGCGTGAAGGAGGGGGAGGTGCTTGAAAAGGGGTTTGTAAGGTGCTGGAATTGCTGGGAGATTCAGGCGGGCA # Right flank : GTTGGGGGCGCGTCTGGGCGTTTGCACTGGCCCCTCGGAAGGGTGACCGCGTGACGGGGCCTCCAGCCGTTCCTGAGCGGCGCTGGGGCCACAGCCCCATTACCGGAGTCCCCGGAACGAACACCCACAAAGTGCGCAATCCCTAGTTGGTCGGAGCGGTGCTTGGGGGTAATTGACTGTGTTTGTGTCAACATACGCGCAGGCTTGGTAGGATTGTTGATGTTGCGCAGAGGTCTTGTTGCTTGCCGCGAGTCGCCAATGGAATTTCAAAAGAGATAGGCTTTCGCCCATGGCCAATGCCGTTGGCGTGAACAAGATGTCCGTTGTCACCAAGGACTCCAATGGTGTCACCGTCGCCTTCCCGGACGTGTGCAAGACGCCAAGCCCCGCCGGGCCGATTCCCATTCCCTATCCCAACATCGCCAGGTCCTCGGATACCGACCAGGGCACCAAGAAGGTCTCCGTGGGGGGCAACCCGGTGTGCGTGAAGGACTCCAGCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 5981-2408 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEAH010000067.1 Myxococcus sp. CA023 NODE_67_length_53174_cov_61.1016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 5980 36 100.0 34 .................................... ATGCCCTTGGAGACGGAGGTGGGCTGCGCGGTGC 5910 36 100.0 35 .................................... TAGGCACCCTGCAAGTGAGGCCATATGCTTTTGTA 5839 36 100.0 34 .................................... TGCCTAGCAGCTTCGAGCGCCCACGGAACTTGCG 5769 36 100.0 38 .................................... CTCACGGTCATGAACACGGGAACCCTGGATGACCTGCG 5695 36 100.0 34 .................................... TCGTAATAGGGCCGCAGGACGCCAGTTTGATGCG 5625 36 100.0 35 .................................... GTCGAGGCAACCGCCGTGGAGAGGGGATTGGCCTT 5554 36 100.0 36 .................................... TAATAGCCCATCGCTGCGCTGACCATCAGCGTGTAG 5482 36 100.0 35 .................................... CGCTTCACGTGGTAGATGCGCAGCTCGCCGCCGAG 5411 36 100.0 39 .................................... CTTCTTCATGGTGCTCTCTGGCGGCTGCGAGGTGAGATG 5336 36 100.0 34 .................................... TGTTGGCCTCTGCCCTCTCTGACCTCTCATGGTC 5266 36 100.0 36 .................................... GTGTACGGCGCGGGCGTCGATGCGCCGAGGAGCACG 5194 36 100.0 33 .................................... CGGCCGGATTCGTCCCGCTCCAGCTCGCCGGGC 5125 36 100.0 38 .................................... ACGTGCAAAACGTCCTGAGGCTGATGCGCAACTTGCAT 5051 36 100.0 37 .................................... AAGCAGAAGGCCGCGGCCGCGCGCGCTGGCCAAGGTC 4978 36 100.0 37 .................................... CCTAAGTAGATGCCCATCTCCGGGTGCACCAGCAGGT 4905 36 100.0 33 .................................... CACTACATGGCCGCCAAGGAGGCGCTCTTCGAG 4836 36 100.0 35 .................................... ATGGGCTGTCGCTGGGTGTCGTCGCGTATGACGGT 4765 36 100.0 42 .................................... ACAGCCTTCCTTGGTCGTGGTGCGCTGGCGGTGTCTCTTCCA 4687 36 100.0 37 .................................... TCAATGATTTCTCATACCCCCGCCATCTCTCTGTCTA 4614 36 100.0 41 .................................... TAGCGCCTGCTCTCCCCTGCACGGTGCGCCGCCGCCTCGGC 4537 36 100.0 41 .................................... AGGTCCTTGGTGCCGTTGGGAAACGGCACGAGGGTATTGAG 4460 36 100.0 39 .................................... GTAAATGAGGCTGTAGCTGCGGGCCTGGGTGTCATTGAG 4385 36 100.0 33 .................................... GAGTCCAGGACGCTGTAAACGGGCTCAACGTAG 4316 36 97.2 37 ..........T......................... CCGCCGTAGGGCTTCGGGCCGACGACCCAGAGGGAGT 4243 36 100.0 36 .................................... CCTCCCTTAGCGAGTTTCCACCTCTCAAAATCCAAG 4171 36 100.0 37 .................................... AGCCAAGGGCTCTTCACGCTCCAGCCGGGGCGCTTCA 4098 36 100.0 35 .................................... GTGCGTGTGGCCATCGCGATCCCCGAGGACGGGAA 4027 36 100.0 35 .................................... TTGCAGTTGGCGCAGTACTCCGACGTCAGGCTGTC 3956 36 100.0 36 .................................... TGACGGAGTACGTAATGTAAGGGATTGCCTTGTACC 3884 36 97.2 37 .........................T.......... CGGTTGGCGCTTGGGCCATGGGTAGCTTCTGGTTCCA 3811 36 100.0 37 .................................... CGGTAGTCCGCGGGGAAGTCCATCGCGCGCTGGAGCT 3738 36 100.0 36 .................................... ACGTCCTCACCGGTCATCAGCCTGTTCCGCGCGATG 3666 36 100.0 34 .................................... GCCCGAAGCAGCGGCAGCTTAGGGTCATTGGCGA 3596 36 100.0 35 .................................... TGTATTGTTCAGCGTCGCCATACGCATCAAGCGGA 3525 36 100.0 35 .................................... TCGAGCGGCGACGTCGTCGGCAACTGCTCCGCCGC 3454 36 100.0 39 .................................... TTCCCTGATTTCAACATGGGCACCTATGAGGAGTGCGCT 3379 36 100.0 36 .................................... CGTTCACCCCCGAGGTGAAAGCCCCGCTGAGTTGAT 3307 36 100.0 38 .................................... ATACGTCTCCTCTGTTGCTGTGGATGTGGCCTAGGACG 3233 36 100.0 34 .................................... AAGGAGCACATGAAATTCACGGGCAACGACAAGG 3163 36 100.0 37 .................................... CCCTTGACGGTGGTGCTGTTTACGGCAACACTGAAGG 3090 36 100.0 35 .................................... CACTGCTTTTGTCTTTCTGTCAGGACCTCGTAGTT 3019 36 100.0 36 .................................... GATACGCTCCAGGCCACCCCGCATCGCAGCCACCTC 2947 36 100.0 39 .................................... ACAGACTCCACGTCGGACGGGAGGGGCAGCTCGTTGAAA 2872 36 100.0 33 .................................... GAAGAGGAGCTGCGCGCCGCGCGGGAGATTATC 2803 36 100.0 36 .................................... CCATGGCCAGCAGGCATCGGGAGGCGCGGGCGTGAA 2731 36 100.0 34 .................................... CGTTCAACCGCGAGGAACGCGCCGTCAGGCAACG 2661 36 100.0 37 .................................... TAGTTGGCGCGGTCCTGCGCAGTCGGAGTGGTGCTGG 2588 36 100.0 36 .................................... CGTCCTTCCAAGTCATCCACGACGCGCTCTGCCGTT 2516 36 100.0 37 .................................... GTGAAATCACGGAGTCGGGAAGCAGCATCCGCCAGCG 2443 36 97.2 0 ........................T........... | ========== ====== ====== ====== ==================================== ========================================== ================== 50 36 99.8 36 GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : TGGCGTGGGTGGAGGCCCGGCGCGCGGACAAACTGGAGCAGAAGCAGGTGTTGGCTGTTTTCGAGACGGATTGGCTTTCGCGGCTGGTCTCCCTGTCCCCCGAGGCTCGCGACGCTGGGGCCAGGGCGCTGCGGTCGCTCGTCAAGAGCCCCAAGCTCGAAGCGCGAAGGGATGCGCTGCTCGCCCGGATGGGGACGGACGTGGAGGGACGCTGAGGGACCTGCTCCCCCCCGTGTAGGGGCGCTGTATGATGAATGACATTCAAGCACCTCGCCGTGGCGGAGGCCCGCGCCCTCGAAATGGACGATTTCCCCTGTTGTTTCGTGGGGTTGAGGCTCTTTGACAGGTGAATAGGTGCATGATCGATGAAAAGCTGAGTGATTCCATGGGGTTCGGATTTCTGGGTAGGGTCCGGGAGGCACAACCCTGGCGAAAGCGGGGGAGGTGCTTGAAAAGGGGGGTGGTAAGTTGGCGGAACTGCTGGGAGATTCAGACGGGCA # Right flank : CCAGGGGCGGGAGTCGAACCCGTACCCGGGAGGAGCGAAACCCCAGCAGGATCGCGCCCTTTCCTCTCAACCTCCTGGACTGCGTTGGATTCGACCTCCCGCCACATCCCCTGCCGTCCCGCCCTGTTCCAGCGCGCTCCGCAGGGGCATGCGACACACGTGCAACATGGCGGGGCCTGAAAGAGATGGGCTTCAACCCGCCTAGAGAGAGGCCGAGTTGCGGATGGCTCGGCCCCTCTTGTTCCTACGATTGGTGCTGGAGCGGCTCCAGTAGCCCCGCGCCGTCCAGCACTTCACGCACGCGGTCAGCAAGTGCCACGTGTTCTGGGTTGCTGACCGTGAAGCGCTCGGGAGTGAGGACGATGAGGGTCCCTTTGTCTCCCACGGGTTCGATGTGGACCGGAGCGGGGAGGGGAGGAATTGTCCCCCGGTGCTGGGCCAGGTACGTCACCCACCCGACGTATGGCGATTTCGGGACGCGCCGAGCCTCAGCAATATCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //