Array 1 182862-185045 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGOJ01000002.1 Legionella pneumophila strain NCTC11986, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 182862 37 100.0 34 ..................................... TAGATATAAAAAGATTAAATCTTCTAGCGCACAT 182933 37 100.0 34 ..................................... TCACTACTCCTGAAGGTTATAATTTTTGCTATAA 183004 37 100.0 36 ..................................... TTCGAATACAATCCTAGTGTCTCTGTGTGAATTAAG 183077 37 100.0 34 ..................................... CAGGCACTGGTTCACTAGACACTGTAACATCTAT 183148 37 100.0 35 ..................................... CAATAACAAGCGAGCCTTTTGTACTAGAAGGTTTA 183220 37 100.0 34 ..................................... CTACCAGTTAATCGTAACTCAATCTCTTTTTCAA 183291 37 100.0 34 ..................................... ATAGAATACATAAGTGCAAATTATTAAATGTTAC 183362 37 100.0 34 ..................................... TGAATGTAGAAACCAGATGCCACGAATTATTAGA 183433 37 100.0 35 ..................................... TTTGTATAAACGTTCTGATATGACTTAGGTAATCT 183505 37 100.0 34 ..................................... CTAACCTGATTGCTCAACAAATAATGCTATTGGC 183576 37 100.0 34 ..................................... TCACTTTAGGCCAACGCCGATCCTCCGCTTCGAA 183647 37 100.0 35 ..................................... CTCACATCTTACCCTCAGGGCGGATATTGTGAATC 183719 37 100.0 33 ..................................... ATTAATAATATTTTAGAAGATTGGCACATAATA 183789 37 100.0 34 ..................................... TGACGCAAAGGATTTATTAAAAACGCCTTGTAAT 183860 37 100.0 31 ..................................... ATTTTACCTTTTAACACATATTGATAGGCGT 183928 37 100.0 36 ..................................... TCCATAACTGAAACGTCCTTATGCCTCAACATAATG 184001 37 100.0 34 ..................................... GAATTTGTCGGCCGCATAGACCGCTTTTATCAAA 184072 37 100.0 36 ..................................... CTATTGCAAGCTAGTTTGATCGTGTTATTATAAGAA 184145 37 100.0 36 ..................................... TGACAAACGTTTGTTTTTTAGACACAACACTAAAAG 184218 37 100.0 35 ..................................... CCTGAAAACCCGCCACAACCCGCGCCAGACTTGAA 184290 37 100.0 34 ..................................... ACCAAGTCGAAACAACATACCGAGACCGTGTTGA 184361 37 100.0 35 ..................................... TACATTGTTACGTTCATTTCACTCAGTTTTTCATA 184433 37 100.0 34 ..................................... AGCAATAACCCAAAGTTTCGCGCGCGTGCGCGGG 184504 37 100.0 34 ..................................... TTCTTTTTTCAGATTTCATTTCCTTTTCCTTGTG 184575 37 100.0 35 ..................................... AAATAATTCTTGTGACTCACGTGCCGCCATTTGAA 184647 37 100.0 36 ..................................... TAGGAATTGATTGGGGTAACGCCATCGCCATAGAAG 184720 37 100.0 33 ..................................... TTACTTCATGACCCGGACATTTTACTAAAAAAT 184790 37 97.3 34 T.................................... TCCTATACCTTGTCACAATTTCCTCATATGGCTC 184861 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 184934 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 185009 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 31 37 99.5 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //