Array 1 2928741-2930241 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWMH01000001.1 Paenibacillus glucanolyticus strain SLM1 unitig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2928741 32 93.8 35 ...........T.A.................. TTGGAATCGAATAGAGACAGCAATGGACAATCCAG 2928808 32 93.8 35 ...........T.A.................. CTCGACTTGCTGGAGAAAGACGGGATGATTATCAA 2928875 32 93.8 36 ...........T.A.................. CGATTATGTATGCGGACGATGACGTTAATACTGCGC 2928943 32 93.8 35 ...........T.A.................. AGATATTGGACGAGTTACACCTTTACCGTAATGCC 2929010 32 93.8 35 ...........T.A.................. TTCTTCGTAAGGCCCTTCATAAATGAATTCGTGAC 2929077 32 93.8 32 ...........T.A.................. TGCAAATGGATGTCATTGCTCCCCCACCTGGC 2929141 32 93.8 34 ...........T.A.................. CGACTGCCTTCGCCATCTCAGCGTGACCCATACG 2929207 32 93.8 34 ...........T.A.................. GTCTATCCTGCGAGAGGACGTAAATGGAATGTCC 2929273 32 100.0 35 ................................ TTTTGCCCTCAATCCCCTACAATACAGATAAAGTC 2929340 32 100.0 33 ................................ AGCAACGCTACCAAGCGCGGCGCGACCGGTGCA 2929405 32 100.0 34 ................................ AACTTATCCGTTCCGTTTTTCGCTCTATAGGGGA 2929471 32 100.0 34 ................................ AAATCCGATCCAGTCACGCCCCTCTAACGATGCA 2929537 32 100.0 35 ................................ TCCTTAATTGCAGCCTGGAGCTCTCTGGCGGACAT 2929604 32 100.0 35 ................................ TTCCTGGCATATGTGGCAATAAAGGTCGGTTCCTG 2929671 32 100.0 38 ................................ GCTTCGTATCGTTCGCCAGGCTATCCAATACGCGGAGC 2929741 32 96.9 32 ...........T.................... GTTGCAAGCGTCGGAAGCTCCAACTGACTCAA 2929805 32 100.0 34 ................................ TACGTGAAAGGCGATGACGAGCATAAGCCGGAGC 2929871 32 100.0 37 ................................ TTGAAGGTCACAGGTGCAGCGAAGGATTTTTTGTCAG 2929940 32 100.0 36 ................................ CGGGATACTCCCTGAGCTCGCAATGCGAAATACTCC 2930008 32 100.0 35 ................................ TTGAAACGTCTTTACGATGGAAACTGGAGATTCCG 2930075 32 100.0 35 ................................ TTGCCCTGGGTAACAATCTAGCGACAACAGAATCT 2930142 32 100.0 35 ................................ TGTCATGTGTATCATGTCTTGTATGAATTGATTAA 2930209 32 100.0 0 ................................ | G [2930240] ========== ====== ====== ====== ================================ ====================================== ================== 23 32 97.7 35 GTCGCACCCTACATGGGTGCGTGGATTGAAAT # Left flank : TGGAACATATACTTATCAAGTGGTGGCCGATCAATATACTCGTTTTTTAAGCGAGTTATCTCTTTATTACTTGCGTAGTCAACGATATGATAGCGGTATAAACAGCTTGTTAGATTGTTTGGCTTCAGCTAGTGAAATACATAGTATTGCTATTCCAAAGAACTCAATAGTTGAGAAGGTTATTTATATGTTGAATAATCACAAATTCACTAGCAAAGGATAAGAAGGAAATCCTTGAAGCAAGCGTTATTTAGTAAGTAATTATAAGTGGTTTCTGACATAACAAATTAAGGGATATGATATGATTTTATTAGTGGTAGTAGCGAGTTTAGTGCGAATGTAAAGCGAACATAAAATACCAGGTAGATTCGCACCATGTTATATCCTTATAATACATTAATGTGAAAAATATGTATTTTTTATAAATGTCTATATGGATTAATATCTGTTTTTTTCTCTATAATTTCGTTATTTTTAGTTTAATTTGACCGAAAAACAGA # Right flank : TAAGCGTCAAATACTCCCCACATTTAATATCTCAATAGTCCATGAGAAAATGAGCATATCTTAAATCAAGGTGGTTATCTCATGGACAAACAGCAACGTTTGCAAGAATGGTTGGCTAGGATCACAGATTTTAAATCTAGCGGACTGACCATGTCCGCTTGGTGCCAAGCACATGGCCAAACCATTCACCAATTGAAATACTGGCTTCGGAAATTGAATGAACCGTCTTCCTCTACTTCTTCATCTTCTAGCGGATACAGCTTTCCGCCAAACTGTTCGAAAAATAACAAGTTCGAAAGATCCCCTGCGTAAAAGAACAAAATCAAAGCAGATCCGCATCCCCAGAGCCAAACGACATTCATGGCCGCTCTTGTACGCGGCGCAAATCGATCTTTGCTGCCTGCCAATCTGTTGTGAATTTGGTAGATAAGGTGTAGATCAAAGCAAATGTAACGAAAGAAGGCATATACACGATCGTTGTAGCCATTCCAGTAATAATG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACATGGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCCTATAAGGGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2942348-2943520 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWMH01000001.1 Paenibacillus glucanolyticus strain SLM1 unitig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2942348 32 100.0 33 ................................ TTCCTCTCTAAAGGGATGGAAACCCGGGTATAC 2942413 32 100.0 37 ................................ ATCTAGAAAATCTTGACGTGAAACCCCACTGGATTAC 2942482 32 100.0 33 ................................ AGATATATCAGCAAATATTCCATAATTTGTTGA 2942547 32 100.0 35 ................................ AGCAAGGACCACACTGACGTCTCCGGCGACACCGA 2942614 32 100.0 35 ................................ AGATAATCAACTACTTCCTCGCCCTTGTGATTATC 2942681 32 100.0 34 ................................ ATATTGGATCAACCAGGAACCTGATGAGTTTGTC 2942747 32 100.0 36 ................................ CTTGAGCATGGCAAAAGCGCCCGCATATAGAAGCGA 2942815 32 100.0 36 ................................ ATCACGTTGGTCGGAGCCATGGCTGAGTGGGAGCGC 2942883 32 100.0 36 ................................ TGTAGGTATCGAGGCTGAAATGGGCGGATCGGCATT 2942951 32 100.0 36 ................................ CATAGTGACATCACTTAAGTTATCACTGTAGTATTC 2943019 32 100.0 36 ................................ GCTCATCAAGCGTTAGGAGAGGCAAAAGCATATAAA 2943087 32 100.0 38 ................................ CATTGATCCATCTTATGATACAACCGAAGGCTATCTCA 2943157 32 100.0 35 ................................ TATATATGATTCCAGAACTGTTTTTCACAAGAACC 2943224 32 100.0 35 ................................ TACGTACCTGAGCCAAATCGGCCAAAGCTGCCTTG 2943291 32 100.0 35 ................................ ATGGGCAACCTGTATGATGTGACGGCTAAACCTTT 2943358 32 100.0 33 ................................ ACGTAGGACAGTATCGTAAATAGCAATGTTGTG 2943423 32 100.0 34 ................................ AGTAAAGGTCTTGATCTTGGAACATTGGCTCAAA 2943489 32 87.5 0 ..........A.A..........A......G. | ========== ====== ====== ====== ================================ ====================================== ================== 18 32 99.3 35 GTCGCACCCTTCGTGGGTGCGTGGATTGAAAT # Left flank : TTGGACGAGTATCCTCCATTCTTCTGGAAGTAGGTGCAGTCAATGCTTGTTTTGATAACTTATGATGTGAGCACAATGAGTAGCGAGGGCCAGCGAAGGCTAAGAAAAGTATCGAAAATTTGCCAAGACTATGGACAACGCGTTCAACACTCTGTTTTTGAATGCATTGTTGATGCTACTCAGTTTGCTGTGTTGAAAATGAAACTGATAGATGCGATAGACAAAGAACAAGATAGCCTTAGATTCTATCAACTTGGAAACAACTATAAGAATAAGGTAGAACATGTAGGCATAAAGGATTTTTTGGATATGGAAGGCCTTTTAATTTTGTAGTGCGAATCGGAAGCGAACATGATTTCACTGGGGGATTCGCACCTCAAAAATTACATTAATTTATTAAATTAACAAATTAAGTATGTTTTTTCGGGACATTTTCACAATAACAGAATGCTTTTTTAATGAAATGCCGATTATTTGACTTTTTTTGTTTAAAAATCGGA # Right flank : TTGAAACTAAATTTGATGGCAGAGGTGAACCTGTGAGAATGACGATTCTCGTACAAGCTGTTTTACTTGGCTGGGATCCTGTTGTCTCCCACGTATATCATCATGAGCCGTGGTGATCAGGCGATAGGTCGCTTTCCATCAAAACGGGTTGCTCTGCATCAGGTATGGTTGCTCTTCGCAACGTACGGGATGCATCCACTTGTCCATCCCCCCGGAGGGGGATTTCAAGAAAGGGTTAACCCGCTATAATGAGCCATAGGCCGTGCACAGCCGCGAAATAAATTATTTGAAATTGAATATACATTGCCTAAATATGGGAGATCATGTATTGTTCATGAATATTTCATCTGCTATGATTTTGTATTAGGTATAAAGAATCAGAGAATTGGGGTTGAAGATCGATGAACCGTAAAATGATAGTAACCACAGCCGCTTCTTTGTTAGTCGGTGTGGTTGCAGGCACAGGCATTATGATGAATGATCAGGCTTACCAGTCGGTG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGTGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //