Array 1 2764881-2764573 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072034.1 Akkermansia muciniphila strain Akk1610 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 2764880 33 87.9 38 A.T.....A.A...................... TTCTTCTTCTTCTTCTTCACTGGAAGATTCAATATTCA TG,G [2764871,2764875] 2764806 33 100.0 33 ................................. AGCGCGGTTGACAGCGTGAAAGCGTGCACTGGG 2764740 33 100.0 35 ................................. GAATTCAAGAGTGCAATTAGTCATCCGGCAACCCG 2764672 33 97.0 34 ....T............................ CAGCAACGCGTCCATGTTATTTCCCCTCCCGTTT 2764605 33 97.0 0 ................................A | ========== ====== ====== ====== ================================= ====================================== ================== 5 33 96.4 35 GTCGCACTCCGCAAGGAGTGCGTGGATTGAAAC # Left flank : TGGCGGCGGGTACGGAAGGCTTCGGCAGCTGCTGCGACGGCCGGATCATGTGCGGCCTGTGCTACGGGTTCACGGGTTCCGCGTTGCGCCGCATGCTGGCAGTTCTGGACCGTCTGCCCATTGGGGGTGACGATCCGGAGGATATAGCAACGGGACGCTTGGCCATGGCCGCAGGGGTTCCGCTTCACATAGAGCGGCCCTGGGCGGCATCACGGCCGGAGGGGCGCTGGGCGGCCTACCGCTGGCCAACGATGCCGGCAGTAGCCAAATATGATCGGCTGGACGTGGTGACGCTGGGCACTCTTCACATGCCCCGGCAGCAGATGGACGCAGCAGAGTTCATCCGCGTATTTGACGAGTTGGCCGCCAGGGACGTGATCGGGGAGTAGAGGGCAGTTCAAGCCGTTTTCAAGGGAGGTGCAACCAGGTTGCAATGGGGATGCAGCGGACAGACGTTCAAGGGCGTTTTTCCACAATGCTTGATAATTTTTCTACAAAGC # Right flank : AGAAAAAGCTCTCCGAGCTTGTTTGGTCTAGAGAGCTTTTTTGTTCCATCATCTTGTTAAGTTGTCAGGAAGAGGGGTGATTATTGAGATTGAGTTCTGCCGGGGGGAGGGACTGGAGCAGAGCCAGGATGGGGTCCTGTGGTGCAGCGCCCATTTCCCGCTGGCGTTTGAATTCCTCCTCTTCCTGCTGCAGGGCTGCCAGTTTGGTGTCTTCCACCAGCGCCTTGAATTTGTCCGCCTGAGAGTATTCCCCGTCCTCGTCCCGGAAAACGCGGGCCAACCAGCGGCGTTTTTCTTCCGTACTGAGCAGGGGATTTTTCATGTGCCGGGGAATGTATTTTTGTCCAGCAGGTTTCCGGCAAGCTGTTCTCCATCCGCAGTGGGCCGGTAAACATAAGGGCGACCGTCTCCAATACGGTTGACATATCCCTGCGCAATGAGATCCTGCAGGATATTGGTGACGGTATTAGGGTGCAGGCGTGTGGCTTCCGTAATGGTGC # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGCAAGGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2797251-2796895 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072034.1 Akkermansia muciniphila strain Akk1610 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 2797250 31 100.0 34 ............................... GCCCCGCGATGAAAATCGTGTGGGATATGGGCCG 2797185 31 100.0 33 ............................... TTCCCGAAGAGAGCCGGATGCCGGGGTAGTGCG 2797121 31 100.0 34 ............................... ATCAGTTCGACGATTGCCACGGCTATATCCAGCA 2797056 31 100.0 35 ............................... TCTTGCCCTGCGGAAGTTTGGCGTTAAGGGCATCA 2796990 31 100.0 34 ............................... CTGTACGAGGAAGCCGACCGTTTCAAGGACTTCC 2796925 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =================================== ================== 6 31 100.0 34 GTCGCACTCTCACGAGTGCGTGGATTGAAAC # Left flank : GCCGTAAAAATTCCGTTGATGGCCTGTCTGGCCTCCGCTGTCTCCGCGGCGTTGGTATGGCTGTTGAGCCTGAACAGGTGGACGCGCAAAAGCATCATGTAAACCGCAGATATTTTTCGCAGGTCGCTTCGGGGACACGGCAGTACCGGGATGTCTCTTCTTTTGTGGAAAAGAGAATGAAACGGTTTCCGGGGAGAGGCCTGCAAAATTCTGGACGGGAAAGAGGGAACAGGCTAGGATGTCCCAGCATCGTGTACAGGCCTAGGTTGCCGGAGATGCGGGCTTTTTAACGCATGAAAAGCTCCTTTCCCGGTCTCCCTTCCGCCGACCCCAAGCTCACAGAAAATTCCCGGGACACCGGCGATTTTCGTAATCCGTTGGGGTTCTAATCTTGACAACTATCATCTCTTTTTCACGGCCTGGAATCTTTGTACCTCCCATGGGAGGTTGGCGCAAAACACCCGTTGCACTGTTGATAATCAAACCATAGACGTTCAGGA # Right flank : CCGTCGTCGGTGGCGAAAGCGTAATCAAGGATGAGTCGCACTCTCATGATCTTTATCAATGAAGGGTGGAAAGGGGTGAATTTAGGGTGAATAGGGGTGAACGCTAGGAAAATCAAGGGGAGCAAGCATTGAGTGATCAGAGAAAGACTGTGTAGAAAATATCGGCGTCAGAAGAGGAAATTATCAAGCATCGTGGAAAATAATCATGGTAAGATGTCCCGCATGTGTACACCTGCATATTGCATCCCCTTGTATGGCTCCATGACTGTTATCTCGCCCGAAGACCGAAGGAAAAAGAATCCGCAAATTTATCATCTCCATGATACCGCTGTCGTGTTGATGTGGACAACCCGTGAAAGAAGAAAGACGACATGCTGGGTGCGGGATGTGCTCGACAACGTGTGGATTGTGATCAGGAACGAAAGAGAAGATGATTGAAAAAGGCCGCCAGGAACAACCTGACGGCCTGAATTGTATCTGCCCATTGGGCTAATCATCGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTCACGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //