Array 1 1811-2433 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOW010000020.1 Coleofasciculus sp. FACHB-64 contig20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 1811 36 83.8 36 AAG.GT..-............................ AGCAGATTGGCGCATTTACGCATCTCGGTTTGTTCT 1883 37 100.0 35 ..................................... CTGCTATGACGTTCAGCAGCGAACGCATCGCGGCG 1955 37 97.3 36 ..........T.......................... ACACCGGGTTAAATGACCAAAAAGAGTTCACTCTTG 2028 37 100.0 35 ..................................... ATGGCTCACAGCCTCAAGATTTTGCATTGGGACTG 2100 37 100.0 35 ..................................... GTGCCTTTTCTGCGTTGGTTGGGCTGGCGTTAACG 2172 37 100.0 45 ..................................... TGTTGGCGATCGCTTAGAAGACCAAAAAGCGGCAGCGCAAGCTGG 2254 37 100.0 34 ..................................... CTACATCTTCATCGTCTAAGGGGTACTCCCTGGA 2325 37 100.0 35 ..................................... CAAAACCGCAGCAAGAACTTTCTCGTATTGCAACT 2397 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 9 37 97.9 36 GTTTCAACGACCATCCCAACTAGGGGTGGGTTGAAAG # Left flank : TCTGGCTTCGTGGTGCGCCTGTAATCTTTCACGAGCGATCGCTCAAACTTTTCATTGCCTTGATTCAGGGCGATTTGAAATCGGAAATCAGCCGTTTCTTCAGCTACTAATAACATTGCATAGTCTTTCAAGCCATCTTGATTAAAATCAGCCGAGAAGATGCTGCAAGTAAACTTCTGGTTCGGAGTTTCACTAGACTTAAAGTTGCGAATCGACGGTACAAAATCGGATTCCTTAGCGAGGCGGTGTTCGCCAAGGGTTGCTTTCACAGGTTGCGGGACTTCGCCTTGACACTGCAAATTGGGTAACTCAGCCACTGTTGAGGGAGTTGGGGAAGTTGTCGATGTTGTTGATGTGGACTGGTTGGAATTTGTTGTAGAGTTACAAGCACCCAACATCAGAACCATTGCCAATAAGAAAATTTTTTTTATCATGAGCTGCTAATTAAATCTGTCTGCTCAAGTAGAGCTTCCAAGGCGCGATCGCAAATTCCGGGGATT # Right flank : GAATAGACCTCCTGCATGAATCAGTGAGTATGTGCCAGTTCGTAGTTCAACAGTCCCGCAATCAAGTTGAAGCGTAAGCCAAACCGCTTTCTACGATTGCGATAGCGTCCCGAAAAGATGCGAAATATCTTGAAGCGACGAATCACATGCTCAACTCGAACCCGGAGTCTTGCTAATGCCCGATTGTGCTGTTTGTCTGCTTTTGGTAACGGTTGGTTGCGTGGCTTCTTGGTGGGAGTACACGCTCGACTGATGGCGTTTGGCAAACCCTTGATAGCCGCGATCCGCCAAACACAGTTGTGACGGAACAAACGGCAAGCGACTGTGCTTGAGTAGCTTAAAATCGTGCATTGTGCCGCACGCCACAGCAGTAGCAATAATCTGTCCAGTTTCAAACTCCACTAACAGTTGCGCCTTCATTGTGTGACACTTTGAAAAGCCACTGTAGTAGTGCTTCTGTTTTTTTTAGGGCGTTCGATTTCCATCTCCCCCACATCCAC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACGACCATCCCAACTAGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.30,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 1 191094-200253 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOW010000033.1 Coleofasciculus sp. FACHB-64 contig33, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================================= ================== 191094 37 100.0 36 ..................................... ACAAAAGGCTTTCTCCTCTCTTGAAGCCAATCTTGA 191167 37 100.0 36 ..................................... ATCAAATGGCAGGCAACCCCATCGGTCGGGCTGTCG 191240 37 100.0 37 ..................................... ATTAGAGCGCCAGATACTGTAGAGGCTGACACTCTCG 191314 37 100.0 40 ..................................... TAGGATTTATCCAATAAATGAATGATAACCGTTTGCCATT 191391 37 100.0 35 ..................................... AGTTTTTCGTAAGCTTCATTCAGCTTTTGCATCTT 191463 37 100.0 36 ..................................... TCCCCGGCGCTGTAGCTGGAGCGGTTGCCGGGGCAA 191536 37 100.0 37 ..................................... GTAATTAGCTACTTGCTCCAAGTCAATTCCCTTGGGA 191610 37 100.0 36 ..................................... CATTTTGATATGTTGTCTTCAGACAAGAATAGGTTT 191683 37 100.0 36 ..................................... TGTGCAGATAAACTGCTTTGGGCTGCTGACTTTAAA 191756 37 100.0 36 ..................................... TTGCGATATTCTTCTCTCTTCCCGATGGCAGCAACA 191829 37 100.0 36 ..................................... ATGCCAGAGTTGTCGCAGATGGCAAGTTTGGAACAG 191902 37 100.0 36 ..................................... ATTCGGAGAGCCGCCCCTCGCGATAAAAGCCATAAA 191975 37 100.0 36 ..................................... AACCTCCAATCAAGTTCCCTGAATTCTGGGGCACCT 192048 37 100.0 35 ..................................... TATCGGCTTGTATGCTGATGAAAACGCATACCTGA 192120 37 100.0 36 ..................................... ATGGCGACGGCCCCGGTGATGGCGACGGCCCCGGTG 192193 37 100.0 35 ..................................... ACCCTTGAGCGTTTTCTGGCTCGTAAGTCATCAAG 192265 37 100.0 36 ..................................... TTATGGATTATGGGATCGAGATTACATTCAGCCCAG 192338 37 100.0 35 ..................................... TTCTCCAGGCTTAGCCTAAAAGAGTTTGCCCTTGG 192410 37 100.0 37 ..................................... TTTGCAGTTGCCATTGTTGTTGCCTCTTGGTTTTAAA 192484 37 100.0 40 ..................................... AAGCCCCGACGAGCATAGAGCTTGCGGCGTGTGTCTCCCA 192561 37 100.0 34 ..................................... ATGACAACAACTGAAAGCGTGAACATCCGGAGAA 192632 37 100.0 38 ..................................... AGGTTTGGGTAGCGCACGTCGCTGAAGCGCTGGGAGGA 192707 37 100.0 36 ..................................... ATGAGCAAGCTCAACCGTAAGGGCGTCAGTGGGAGG 192780 37 100.0 37 ..................................... TAACTGGCTTCTAAGCAGCTATCCGAAAAATTCTCTA 192854 37 100.0 35 ..................................... ACGCTAGGGCCTGACACATAGGAGCCAGTCCAAAG 192926 37 100.0 36 ..................................... CTTTTTCAAGCACCCTTTTGTATGGTTACGGGTTTG 192999 37 100.0 36 ..................................... TTTAATTTGCGACAAAGTAGCTCAGATCCTCCCCTA 193072 37 100.0 35 ..................................... AGGAAGCTTTTGGTAGTAGTTTGCTACCTGCTCTA 193144 37 100.0 35 ..................................... ATTGTATTTCCCCGTGGCTCAAAAGGAGCAGGGTC 193216 37 100.0 36 ..................................... AGCATCAATGTGGGGGCTGCTGCCTTGCCTGCTGCG 193289 37 100.0 38 ..................................... TTAGTGCAAACAGTTATTAATAAGAGGGAAAGGGTTAG 193364 37 100.0 38 ..................................... AACCAATACCCATCGGCGGTTATCGATTGCAACGAGCG 193439 37 100.0 35 ..................................... CTGAAAACAGCACCACTTGAAAACCACAATGATTG 193511 37 100.0 38 ..................................... CCACTTGTGAGCAGGGTGCAGGCTCCGGTTTCATCGGG 193586 37 100.0 36 ..................................... GCGCATGGTGACATGGAAGCGATCGCGCCCAGTGTT 193659 37 100.0 36 ..................................... CAAATTGTTTCTGGTGCCGTTCCCGCGCTTCTCCAG 193732 37 100.0 37 ..................................... TTCCCCCCCTTGATTAGGAGCGATTCCAAGTAATCGG 193806 37 100.0 37 ..................................... AAATAATTTCAATTCAGTTAGACGGACGAGGCGAGGG 193880 37 100.0 35 ..................................... AAACCTTAGAAGCTTGTCGCGCCAAACTCTTAGAA 193952 37 100.0 35 ..................................... AAGCTTACTCATCCCGACTTAGGCGGAAACAGTGC 194024 37 100.0 39 ..................................... TCGGGCAATTCCGGCACATTGTTTGGCAGTGCGAATTGG 194100 37 100.0 35 ..................................... TCCCATGAATTTAACAATGAAGTCCAAAATCACTG 194172 37 100.0 36 ..................................... CAGCTCGTTAGCTGTGCTGACAAATTGGATAATCTG 194245 37 100.0 37 ..................................... ATTTCCAAGCGATATCGCCCGTCGATTACTTGATTTT 194319 37 100.0 37 ..................................... AGACTTCTATTCCTGGTAAAAAGAACAAAAAGCAAGT 194393 37 100.0 37 ..................................... TGTTGAACATCTGCCAGACCGCTGTAAGAGAGCTGAA 194467 37 100.0 36 ..................................... TCGCCCTCCCCGACCTCCACAGTCTGCCCTTCCTGA 194540 37 100.0 38 ..................................... ACTCCTCCCTGATTGCAGGCGTAACAAGCCGCATTCAA 194615 37 100.0 34 ..................................... TTTTCGGAGGAGGGACGACAAATGGCGTCTCGCA 194686 37 100.0 36 ..................................... ATACCCAGTTTTTAAGGAGCGTTTTGACCCTGGAAA 194759 37 100.0 36 ..................................... TTTTCCCATCCTTGCTTGTACTCTTTGAGCGAAGGT 194832 37 100.0 38 ..................................... CAAGGCACGGCTCAATCACCTCGCTGAAAGTTTGCTGC 194907 37 100.0 34 ..................................... ATATCTAATGATGCTGAAGCAGCACCAGCCAGAA 194978 37 100.0 37 ..................................... CGATCGCAGTACTGAGTTTCGCCGGGGCATTCGTCGG 195052 37 100.0 38 ..................................... AAGCGATAAGCATAAGACTGACACCACAAACAACCCGA 195127 37 100.0 35 ..................................... ACAAGAGAAAGCGATCGCCCCTCGTTGGCTTCTGT 195199 37 100.0 37 ..................................... GCCAAAGAGCAGCTCTTGAGCTATCGGAAACCCAAAA 195273 37 100.0 125 ..................................... AGCGATATCAGGAGTGTTATTCTGCATCCTCATGATCCTTTCAAATGGCGTTGCTGATTTGGTAATGCTATAGCTATTTCACAAGCAGATTCCTTCGTGGAAAAATCATTACTTTTCAGCAACGC 195435 37 100.0 37 ..................................... ATCGCTCGACTGCGGAAGGAAATCCAAGGCTTGGAGG 195509 37 100.0 37 ..................................... AATTCCTCCACATCGCAACCCATAAGGGATCGCATTA 195583 37 100.0 37 ..................................... GTACTCGTTGCTAGGAGCGGCGCGTGAAATATTTAAC 195657 37 100.0 37 ..................................... CCTTCCAAGCTTGTAAGTGAAATTTCCAGTACCTCAG 195731 37 100.0 37 ..................................... TCTCTTATTCCTCTTTATCCGGCTTGTGTGGTTCTAG 195805 37 100.0 36 ..................................... TCTCTTATTCCTCTTTATCCGGCTTGTGTGGTTCTA 195878 37 100.0 38 ..................................... TCGTCCGCCCCGCCCCCCTCTTGCCCCTAAGCCTGAAG 195953 37 100.0 36 ..................................... CTTTCTAATACTTGATGGCTACCTCTATGATCCAAG 196026 37 100.0 35 ..................................... CTTTCTAATACTTGATGGCTACCTCTATGATCCAA 196098 37 100.0 35 ..................................... TTACTATGGCTTTCAACCTTCTGGATGGATGCAAA 196170 37 100.0 38 ..................................... GCTCCTGCGATGGGGAAAAATATGATGGCAGTTCTAGA 196245 37 100.0 36 ..................................... GATTGATAAGCGAGGAATAAAGCTAAGGTCATCTGA 196318 37 100.0 37 ..................................... ATGTACTCTAGTCCAGGATCAGGAACATACATTACAA 196392 37 100.0 36 ..................................... AATGCTTTTATGTCTCGAAAATTGGCAGAAGTACAA 196465 37 100.0 38 ..................................... ATAATAACTTGTAGAGTTGCATATCATTAACCTTATAA 196540 37 100.0 36 ..................................... ATGGCTATAACTCGAAAGATACGGATCTGGAGAGAA 196613 37 100.0 36 ..................................... ACTTGAACTTTTTCATCTTCGTTTAAATTAGAAGTA 196686 37 100.0 37 ..................................... CATCCCAACTGCTGGCTCAATTGCCAGTAGATACTAA 196760 37 100.0 36 ..................................... AGTCTCTCGCAAGTAAAGCCACGGCGAATCTCAGAG 196833 37 100.0 39 ..................................... GAGTCAAGGGGATGAGCAATCGCGATCGCGGGATTCTAG 196909 37 100.0 36 ..................................... AAAAATTTGGCACTGCGCCACGGAAACACCCACTTA 196982 37 100.0 36 ..................................... TTAAATGGAAATTAATTGGCATTACTGCGCGATGTA 197055 37 100.0 38 ..................................... ATTGTAGGGCTATTCCCCGATTCCAACCTCTTCCTAGA 197130 37 100.0 34 ..................................... AAGCACTTGACGCTGTTCCTCAACTAATTCTTAA 197201 37 100.0 37 ..................................... AGAACCCAGGCTCACCTAGTACACTTGTACGCGGTCG 197275 37 100.0 39 ..................................... AAGCATTGGATGGGATTCCATCCCTCGTTTTATCGTTTG 197351 37 100.0 35 ..................................... TCTTATCTAAAGAGCAATAGTTTTTTAGTAGTCAA 197423 37 100.0 34 ..................................... TAATTCAAATGACAGGATTTATGCAAGGTACTGG 197494 37 100.0 38 ..................................... ACTGTAGAGGGAATTACATATAGACCTAAGTAACCTTA 197569 37 100.0 36 ..................................... GAACCCATCAGCATCACTCCCACCATCACCTCTGCT 197642 37 100.0 35 ..................................... CCTGTCAAGGTCTATGTGTTCGCCAAGCGCCAGAG 197714 37 100.0 37 ..................................... ACATCGAGAACGCCAAGATCGTGACGACCTGGAATCG 197788 37 100.0 35 ..................................... CTTACTTTGGTCGGGAGTTCCAACAGCTTGCCAGG 197860 37 100.0 37 ..................................... ACCCCAAAAAGAAGCCAGTTAAAGTTAGTTATAAGGG 197934 37 100.0 38 ..................................... GTGTAAGAGGTGCCAGGATTCCCCACTACCACGAGTAA 198009 37 100.0 37 ..................................... CAGTTGCATTGCCTGCTTCTTCGGCGGCAGCTTCTCG 198083 37 100.0 35 ..................................... TCAACATTATTTTTCAATCCCGTTCAACATGAAGA 198155 37 100.0 36 ..................................... ACGACAGTAGATTAAGTGACAGTAGAAATCCTACAG 198228 37 100.0 35 ..................................... CGCTCATAGCAATGCATTAATTGTTCGCCAGTTGC 198300 37 100.0 36 ..................................... AGCAGACTCAATGCTCTAAACAGCGCATCTCCAAAA 198373 37 100.0 36 ..................................... CAGCCAGCGACAGATTGCAAAACGGATCGACGTAAA 198446 37 100.0 37 ..................................... CTCACTCAAACTACCGCGCAGGTTTTAAGAGCTGCAA 198520 37 100.0 39 ..................................... GAAACAGACTTTGACGTTATCACCGAATCTATCGCAGAA 198596 37 100.0 37 ..................................... TTGATGAAGATATTCTTATGGATATCATTGAAGGATA 198670 37 100.0 36 ..................................... TTACCATGCCTCCCAGTTCTGATGCTTTTACCTGGA 198743 37 100.0 39 ..................................... CTTGAAAGATGCAAAGCATGGCTCTGAATATTACCCTGA 198819 37 100.0 36 ..................................... TTCATGAGGCGGTCTGAATTGGTTCCAGGTTTTGAA 198892 37 100.0 40 ..................................... GCTCTATGGGACTTTTTAAACCGAAGATTCAAGATGCTAA 198969 37 100.0 37 ..................................... TTGCTTTGCACTGGGATACTGGGGCGGAACTGGCAAG 199043 37 100.0 34 ..................................... TTACAGCAACGATCCGAGTAGGTTTTGGGATGTC 199114 37 100.0 37 ..................................... TTTGTCATGTGCTTGATTCAAAATCAAATAATCTAAT 199188 37 100.0 38 ..................................... AGTAGCGATACCCCAAGTCTTCGGCAGCTTGACGGTTG 199263 37 100.0 37 ..................................... TGGCAGCGTATGCAATATTCGCCTGCTACGGTGTGCA 199337 37 100.0 37 ..................................... AATTTCAGCAGTACATCAGGGCGTCCACCATACCTTA 199411 37 100.0 36 ..................................... AATGAAACAAAAATACGGACGTTTTTAGCGTACATA 199484 37 100.0 35 ..................................... TTTGCGACGAGCAAGGGCTTGGTTGATTACGTCTT 199556 37 100.0 35 ..................................... TTTGCGACGAGCAAGGGCTTGGTTGATTACGTCTT 199628 37 100.0 36 ..................................... CAGTATGACGACATCACCTTAGAAGCACCCTACGAC 199701 37 100.0 41 ..................................... TAGCAATGTTTAAGGTCAGTTTCACCGTTAGCGATCTGGAG 199779 37 100.0 38 ..................................... CTCATAATATCCGTAATCCATATCTGCAATCCATTACA 199854 37 100.0 36 ..................................... ACGTAGGCTCGTCCATACACAAGCCGGGTTTCTGTT 199927 37 91.9 35 .........C......T..T................. TAATTCCCTTCCCTCGTTTTTTCAGCCATTTTTTA 199999 37 91.9 36 .........C......T..T................. AATCGCCAGAGCGGATAAAACTGACCACTCAACCAG 200072 37 91.9 34 .........C......T..T................. CTTTGTCTACACTCTTGGGGGATTTTGCTTACAA 200143 37 91.9 37 .........C......T..T................. TTTCCAGTACCTTGAGATCGCGCTTTTATGGGTCAAT 200217 37 89.2 0 .........C......T..T................T | ========== ====== ====== ====== ===================================== ============================================================================================================================= ================== 124 37 99.7 37 CTTTCAAATTAATGAACCCCGGCAACGGGATTGAAAC # Left flank : GCCAAACCCTATTTTATTTGGTCGTCTATGACTTACGTGACAATAAGGCAGCAAATAAACGGCGAAAGCGATTGCACGAGCTGCTCTGTGGTTATGGAACTTGGACTCAGTACAGTATTTTTGAGTGTTTTTTAACGGGGATGCAGTTTGCTAAACTCAAAGTCAAGATTGAGAAATTGATTAATCCAATAGAAGACTCCGTGCGGATTTATGTCTTAGATGCAGGTGCTGTGCGAAAGACAATCACCTATGGATCGCAGAAACCTCGACAGGCTGAAACGATCATCTTATGATCGTAGTCAGCGTCAAATCTGACGGGTCAAAGCGGGGGCGAAAATCCTGGGGAGCCGTCAAAACGCTCAGAACCTTGAAAATTAAAGAATTGAGCTTTTTAGGAAATTCCTAACTGTTGCTCGTTACCCCATTTGACAGTTCCAATTTTGGGAGCCGTCAGAATCAGTCCTAGAAATCCCTCCCAGACTGGATTTTAGAGCGCGGGC # Right flank : TAGGAGTGAGAGGGCGAGCGCTCACTTCAATGACCTGACAACGTTTCGCTTAGCAATGGAATGATGTAGTTGAGCCAACACCTCTCATGCAGAAAATGTAGAAGTCTGACCGTCAGCAGCTAATCAAGATTTTATAACCACTGCTATCACTCCCCTGAAGCTTCTCGACATTCAAACAGACTCCACCCAGCCAGTTCATCCTATGCTTGGGCGAGCGCCTGCACCCAAGACCCCTAAATAATCAAGAACTGCTCTCTGGTTCATCCTCTACCTCAACACCGTAGTCGGTGAACAGACGAGCCATAGAGATGCCCAGCGCATTAGCTAGCTTCTCAACGTTCTCCAGAGAGGGATTTCGCCCACCTCTCTCAATATCCGAAATGTAGGTTTGATGAAGCTCAGCTCGTTCGGCAAGTTCCTCTTGAGACAAATCCAATTCTCGCCGACGCCGCCTGATGGCTTTCCCAAAGCGATGGTTAATCTCTGATTGTTTTTTTCGA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAAATTAATGAACCCCGGCAACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.40,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 203643-203176 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOW010000033.1 Coleofasciculus sp. FACHB-64 contig33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 203642 37 100.0 35 ..................................... TCCCAGCTCTGTCAGACGCTAAACCATGTAAAGGA 203570 37 97.3 36 ....................................A ATTACCTATTTGACACTTCTTTCCGACATTCTCTTT 203497 37 97.3 35 ....................................G ATGATAACGGAACAACGATGATTGCAGTGAAAGAG 203425 37 100.0 36 ..................................... ATTTAGTTCCTTGCGTAAAAGTTAAAGGGAACTTTG 203352 37 100.0 33 ..................................... ATCTTCTGAGGGCAGAAAGTACACCATCTGGCG 203282 37 100.0 33 ..................................... TGCAGCCGTTTTTGCTAGTGGATATGTGCTGAT 203212 37 83.8 0 ..............C...T.TA...A..........C | ========== ====== ====== ====== ===================================== ==================================== ================== 7 37 96.9 35 GTGATTCGTGGCTTTATGCCGTTAGGCGTTGCTCAGT # Left flank : AGTAAGACGGTTTGGTTGTTTGTTTTTGGGAGAAAGCGACCAGTTGATTAAAACGATCAAACTTGCAAGGGAAGATTATCTAGAGGGAGTCAAACAGTGGGCGATTAGGGATAATCAAGGCAGTTTAACCTTACCCTATTGGGTTGACCATGTAGGGTCAAGAAATACCCGATTTTTGAGGTATCGGATGGAGGAAATGGCAAGCTCACCACCTCCTGATTTGGCGTGGACGATGATTCAATCTCCGATTTGACAAGTATCTCTGATGGAAAAGGGAATTTAAAGTAAAAAAATAGCCCACAGGGTTACAGGGTGAGGGGTATGGCAATTTAGTCAAGGAGAAACCTGCTTGCTATTTCTGGAAAAGTTTATAGGGACTGGGTTTGAGGGGCTGAAGGTAAAGGATATTTTGTAAGTTTTGTGTTTTTGGGTTCTCTATCCCAAAGGTGCTTGTAAGATTGTAAATGAGCCTTTATCAGTCAAAGGGTTTCCCTTTTGCT # Right flank : AACTTTAAATCAAAACTTCAACAGCAAAAGTTCACCTAAAGCAGCTCAGAGCATATCAAAATATTTATCCGGTTAGGGTACTCAGTGCAAGTCCAAATTTCTTTGGAATAAGCAGTGTCCTCGAACCTTGGGTTTCTCAATTTCTTTTGCGGTCAACTCATCAACTTTTTCCCGTTCGCCTGAACTTGTGTTACATTCCACTTCTATTTCATCTTAATTTCATACAATTTCTTACCACGCGATTTGACACCAGCTCAAACCTATTAGGCTCAGGCACGTTTTTTCGGCTGGCGTTGAGATAATTGCGGCTGATTTTACCCTCATGTTTCACGAGAAACAACACGAAGACTTTCACTGATTGAGCCAAGGGCACTGTGAATTTCTGCTTTCATCACCTTGGCTTTTGTGCGAATCCCCTCTGTGTTTTCTTGTAAGTACGTCAGGTGAGAGTTAATTTGGCTAATGTAATTTAGGGAAGATTGAATGCGCTGAATCTGAGC # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATTCGTGGCTTTATGCCGTTAGGCGTTGCTCAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [14,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 44983-46625 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOW010000028.1 Coleofasciculus sp. FACHB-64 contig28, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 44983 36 88.9 36 ............A.A.T..................A GATGACCGCTCTAGAGGGTATTGCGGAAACTGGTTT 45055 36 83.3 40 ............T...T........TAC.......A GTATTCCTGCTCAAGTTTACCCCCATATGAAGTGTAGTTC 45131 36 77.8 39 ............T.C.T....T..A.A....A...A GACGAACATCGTCTTTGAGGTGGACGGCATAACGTACTC 45206 36 83.3 41 ............T.C.T....T..A......A.... CAGACACACGAACCATTCTTCCGCTCCTCTTATGAGGAAGG 45283 36 100.0 35 .................................... CTGACATGTGTAACAGGTTGACAGCCTACCCAGGC 45354 36 100.0 39 .................................... CACTAAGGGACCTGGCTACGCAACTAGCGGGTCCAATAA 45429 36 94.4 38 ...C...........................A.... TTTGGCTATTGCATTTTTCTTTCAACTTCTTCATCCGC 45503 36 100.0 37 .................................... TTAACGTTTCCATTCTGCAAGGAATTACAGATGGTTC 45576 36 100.0 36 .................................... ACTATTTGAAAAAATCTGGGTCGCCTGAACTCTTTC 45648 36 100.0 36 .................................... TTTCTCATATTTTCTTTCTTAAATAACCAAATTTTC 45720 36 100.0 39 .................................... TCAAACAAACTTGAAGGGTTTTTTGTAGGTAGTACATTC 45795 36 100.0 36 .................................... CCAAGGGAAATATTTCGATCGGCGTGATGACTACAA 45867 36 94.4 35 .....T.............................A TCCAATTCAAATTCGGGGGTTCACGGCAGCGGCAA 45938 36 100.0 43 .................................... TTCTCCCCCCAGGAGGCATCGCATGGTCCGCTCAAGGTCAATT 46017 36 100.0 35 .................................... TTGATTTTGAATGCTTTCTATATTGCTCCTACAGG 46088 36 100.0 34 .................................... TTTGTCGTAATTAAAAATGGTACGAGACATAATC 46158 36 100.0 37 .................................... TACACATAAGCCAAGCAGTATTTCGACCAACTGTATG 46231 36 100.0 34 .................................... AACCCATAACAATGGTAACGGTACAGGAGCTTGC 46301 36 100.0 34 .................................... TTCGGTTCAGCAGTCAGCCCACGCTGACCAGATT 46371 36 100.0 35 .................................... TTCTTAACCAGAACATGCAACGCCCGGAACTCCAG 46442 36 100.0 37 .................................... AAGTTTTAATTGTAGGGCCAACAGGTGGGTATACATG 46515 36 100.0 39 .................................... GTCCTTTCATTTGTTGGTTTCTGGTTTTAACCATTTAAC 46590 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 23 36 96.6 37 GTTTCCATTCAAGTTGATTTCCCAGCGAGTGGGAAG # Left flank : AAACTGTCCTCTATGAATGATTATCTCCCGACAGCATCGGGGGACTTTTTTGGGTTGGTTGAGTTAAGTAGTACTGCGCCAATTGATTTGGAATTTTTTGCGAACTGCTGCTTGCAGCGGTGCTTTGCAATCGCATCATTTCCACAGTCCTCGCAATACCCCGCCAGTTTCAGGCATTTTCAGACATTAATATACACCGCGTTTACTTAACAGCAAATGCGGTGTGTATTTGTTTTGGATTTTTTTCTTTAGTTTTTGGACTCGGAGCATTCCGGGTTTACACCTTTACAAAATACTCCGATTAGACAGGCTTTTACTACCTGTTGATTTGGGTTATCTGGACTGTGCCTCTCGCGTTAAGAGGGTGCCAGTCCCCAAATCAACAGTAGTTTTTCTTCTCGGTTTTGTCAAGAGTTGGTTAACCTTAACAGGTTAACTACTTCTTTTTAAGTGCGAAGAATTAATCCTTTGCAAAACACTTCAATTAGGCAGGCTTTATA # Right flank : GAGTTCGTTCAGTAGCCCTTATCCCGTAAAGGTTTCAGCCGCCTCTCTCGACGCATCTCTAAAAACAGTAACATATGCTTCCAAGAATTGAGCCAAACACATACCTCAAACCCTTTCCCTGTAAGGTATCGACACACCTTAACGAAAAATATAGGGTTTCGGCGATTTGCTGAGGTGTGTCGATTAGCTTCATTGGACGCTTTTCTGATGCAATTTTTAAAAGTTAGTAGCTTGACTTATCGCCAAGATTAGTATGTATCAGGGCACTCATCAGCTGACAGCTTGCCAGCTCAGACTACAATGACACTCGCTAACTAACTTCGCAATAAAAAGACAATATCGAAACGATACTCAATGTGCAGACTCTCATGCCAGAGAAAGTAAAGTAACAGCGCTGATAAATTACATCACTATTAATATTGCCTTTTAATTAATCGTTAAATAAGGCTAGCGCTAATGTAGAATCCTATGCCCAAGAAACCCCAACCTCACCCCTATGG # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAAGTTGATTTCCCAGCGAGTGGGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 54766-51668 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOW010000028.1 Coleofasciculus sp. FACHB-64 contig28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================================== ================== 54765 36 97.2 43 .....................T.............. CCTCGTGATCCTCCAGGTGCTGTCCTCGGGTCTGAACCTCCTA 54686 36 97.2 48 .....................T.............. GCGAGGACGCACCGGACACAGCAGCGGCACCGGCATTGAGCGCGACTG 54602 36 100.0 38 .................................... GATGATGAGGTGTGCATTCCAGGGTTGGCTGATGGTGA 54528 36 100.0 35 .................................... GCTAAACAAATGGCTGACAATCATGGGATCTTTTA 54457 36 100.0 35 .................................... AAGAAAGGGATAAGATTGTTTACTTATCCCTTAGA 54386 36 100.0 44 .................................... TTAGTGCAATGGGTTACGCACACACTGGTGCAGGGGTATATCAA 54306 36 91.7 46 .....T.........G..........A......... GTGCGATGGGTTACGTGAACCTTTTCACCTTCAAGATTGTGATGGA 54224 36 100.0 46 .................................... GAATTTATGCCACTGAAGAGGAGCTAATGCTCTTGATGCAGGTGGA 54142 36 97.2 63 ...............G.................... GTTTGGATGAATTGACTTAACGGTTTAATTATCAACTTGCAGAGTTGGTTAAGCGATATAACC 54043 36 94.4 38 .....T.........G.................... AACCATCCCTATGCGGTTTCAAATACCAAGATCGATGA 53969 36 94.4 43 ...............G........T........... TTTGTCGCAGCACAAGAGGTAAAAGTTGCAGGTAATGAATTAG T [53934] 53889 36 97.2 51 ...............G.................... GTTAATGGTCAGCCCAGGAACGCTTTGGTCGTTGCAAATAAAGAATAATCA 53802 36 88.9 35 ...............G........AG.........T CGCTTCGCGCTAATCAATCTTTGAACACCTTCACT 53731 36 94.4 42 ...............G........A........... TAGAGTTTTCGTAGAAACCCCATACGGCTTGGCTCCATTTGC 53653 36 94.4 51 ...................T.............A.. TGGGGTGCTTTTGGTGACGCCAAGCGGCTTGGCTCCGTTTGCCTCAATCAC 53566 36 100.0 35 .................................... GCTTTTTATGAAAACTGGAAGGATTCTGTAGGGAG 53495 36 94.4 51 ...................T.............A.. TGGGGTGCTTTTGGTGACGCCAAGCGGCTTGGCTCCGTTTGCCTCAATCAC 53408 36 100.0 46 .................................... TCGTTAAGGCGGGTACTCCGGTGTACAGAATGCTGGAAATGATGTT 53326 36 100.0 36 .................................... TCAAATGTCAGAACTGGCGCAGCTTAGCAATTTAAA 53254 36 97.2 44 ...................T................ CCAACTTTCTTACAGAATTGCAGCAATCTCAGATAGAGAATACC 53174 36 97.2 46 .................G.................. ATTAGCTCCGGTGGAAACTGCAAACGATGCTGAAAAGAGCTTTGCC 53092 36 100.0 42 .................................... CATTAATTACATGACTAGATGCCATATAAACGATGGAGAGTT 53014 36 100.0 41 .................................... AAGTATTGGAAGACCAGCCAAACCAAGAAACGCAAGAGCGC 52937 36 100.0 44 .................................... TGAACACTTTCAACACAATGGTAGAAGCTAATCCTGCACTTGCA 52857 36 100.0 35 .................................... GGATCATACGAATACACGGGTGATTATCAGTATTC 52786 36 91.7 35 .......G...G.......................G TTAGGGAAAATATTGCACCCTTCTCCGCAATCGAA 52715 36 97.2 42 ..................................G. TGGAGTTTTCGTGGAAACCCCACAAGGCTTGGCTCCATTTGC 52637 36 100.0 51 .................................... TGGGGTGCTTTTGGTGACGCCAAGCGGCTTGGCTCCGTTTGTCTCAATCAC 52550 36 100.0 40 .................................... TGGATGCACACAACAAAGTTCAACAATTAGTGGAGTTTTA 52474 36 100.0 40 .................................... TATTAAAAGGCTTTCAATGCCTTGCACAAGTACCGGGAGT 52398 36 91.7 49 ..............C.....T...........A... CCGCGATCGCGGATTGGCTGATCGAACACAAGCAGTTTGAACTACTGGC 52313 36 100.0 36 .................................... TTATCTTTATCAAATCAGAGAAATTTCAGCCAACCA 52241 36 94.4 41 ...............G..........A......... AATTCTCTGCTGGCGGCGCTTAACGAAAGGGTGTTCTACAG 52164 36 97.2 42 ...............G.................... TTGTAGAAAAATGTTGACGAAGCAATTAGACCGTTTCGTCAC 52086 36 83.3 42 .....T.CC.....CG.................A.. CTGCGATTATGTAACTTATTACTTTAATCCTAATATAGAAGA 52008 36 86.1 43 ....G....T.....G........C........A.. CTCAAAAATTCCCTGTATTAGAAGGGTGGCTGGTGTCAATTAT 51929 36 88.9 37 ....G..........G.....T.....G........ CAGTTCAGTTCAACTCCAGTATGACGATGCTAGATGA 51856 36 86.1 36 ....G....T.....G....T.............G. TTCAAACTTCAGCTTTAGAGGTTACGAGATAACCAA 51784 36 83.3 45 .C..T..............T....AA..T....... TGAAATTGACTTCACCGATATGTTATGGCTACCGCACTATTTCGA 51703 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================================================== ================== 40 36 95.9 43 GTTTCCATTCAATTAATTTCCCTAGCGAGTAGGGAC # Left flank : ACCCAAGCCAAAACCTAAAGTGGTCGCCCAGGAGTAATTAGTGTTTTGCGAACCATCTCATCTGACCTGTCTTCAGTGCAGGTTGCGGGGTGGTTTACTCGGCCTAATGGAGTTTTTGATTGCAGCAACTCTCCAGTCGCGTAGATATCTGTAGGGAGCTGCTGCCATTCATTCTCTGTCCGATTGTATGCGATCGCTCGGCAACCATGCCAGCACAATGGTTAAAGTGCAGTAATACCCAATATGCTTGCCGGTACAAGAGCCTGCCACAATCGTGCGATCACTTACAAATAGCAGTCTAACCCTGCTCTGTAAAACTGGGGTGAAAGCTTGATTTTTTGTGGGTTGTAACCGGATAAGTTCATCAAATTTTCCCAAAGTGCCAGAAAAGGGTATCTGTCAGGTCTTAGAGAATTTAAAGTTCTCAATCTTTTCTCAATCCGTCGCGACGGATTGAGATTTTCTGACGTTGGTTCGTTGCTAAAAAAATTCAAGCAAAG # Right flank : TCACCTCTATTGAAACTCCTACGCCGCCTATTGTCCAGCCAGCGCTAGCGAGAGATCCTGTTTGGGGCGCAAAAATTCCTAATACCTCATAGCTTCACAACGCTGGAAGTCTTACTACATCAGGGAGCGAGGGATCTAACACCAAATCAGGGAGTCTAGCCATTAGTCAAATCCCTCGCACAGCAGCTAAATAATCACTGAACCCGGTACTTGTGTTAACGGAAGACCGCCCCAAACGTCTACTTGACTCAGGGTGTGTCGAGAAAGAGGATAAAAACGCACACTATCTTCCTCTACATTGACTTTCTTTTGAAGTCTCTGGCGTAATTCCTCGTACTTTGATGGAGCTAAGACACACTCAAAGACACTAGACCTCTTGCGTGAATAGGTAGAAGTAGGTTAAGGAGGAACTAGCGATGACCTACGAGCAAATCAAATCCCTCAAGCCCAGTGCCTTTAAGCGCAGATGTGGTGTTCATCAAGACACCTCCCTTGCAGAT # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.60, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATTTCCCTAGCGAGTAGGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [32-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 5597-5059 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOW010000007.1 Coleofasciculus sp. FACHB-64 contig7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 5596 36 97.2 36 ...........................T........ CTAGAAGTCGGCAAAATTAGCATCGATATTGCTGAC 5524 36 100.0 34 .................................... CGCTCCCTCACTTTGACGGTGCGCTAAGTAGACA 5454 36 100.0 36 .................................... AATCCCCCATTCTCGGTCAAAGGGAATCCGCTAGCC 5382 36 100.0 37 .................................... ATTGCATGTTATGTCGCTTGCAATGTTTATGATGCGT 5309 36 97.2 36 ..........................T......... CGAAGATTGCAGGCTGCGGCACTGCACCTACTAAAG 5237 36 94.4 35 ..................T................T ATTACTGTTTTTTGGAAATAATCAAGCCCAAAGAC 5166 36 94.4 36 ...T..............T................. TGCCATCCATATATTAGCGGGGTCAGCGATCGCTCT 5094 36 94.4 0 ..................T........T........ | ========== ====== ====== ====== ==================================== ===================================== ================== 8 36 97.2 36 GTGCTTTACCATTAGATGCCGTTAGGCGTTGAGCAG # Left flank : AGGTGAAAGTCGGGATTTAGTAAATGATGTTACCCTTTTACCTGAAAATTACTATGCAGAATCGATGCGATGGTTAATTCGAGATGAATATAGCTCGCTAACTTTACCTTATTGGGTAGACCATGTGGGTTCCAGGGGAACACGATGGTTGCGTTACGGGATGCAAGAAAGTCAAGTATTTCAACCACCTGAATTAGCGTGGACTTCAGTTCAAAGTGATTAGAGCATATTATTTTCTTTGGCAAGCACCTTTGCTTGGGAAATTTAAATGCCATGAGAAATAGCCTTGTCTTCTTATTTTACAAGCGTTTTAGGTATTTTGTATGCTTCCAAGATGCTTGCGATTTCCTGGAATACTCTAAATACAAGAGTTGAGAGCTTTAAAAACTTTGCTTTTCCCATCAGTAGCTGTTAATTTTTGCAACTTGACCAAGCCTAAGTGGAAGGTGCTTGTAAAATTGATGTAGAGCATAGGCAAATCAACAAATGGGGCGATCGCC # Right flank : AGTTGAGAAGAAGTTACTCTGTATTACTCTTGTTCTGAGTTAACAGAGTTGGCAGTAATGGAATATTGGCTATCAGTGGGATTGAGTTTTGAGGTGGCGGCTAGGGCGTTGCAGGCTTTGAAGCAAAAAGTACCGGATTTTTCCGATCTAGTAGTGCAGAAGCGATTTATGTTGGTCTGGGATAGAACGGAAAAGGATTTCCGGTTAGAGGCATTTGAAAGGGAAGACGCGATCGCATCTCTAGATAATGGTCAACCTGTGATTCCGGTATGCTTGGACGAGATTCATCAGCAATTGGCGGTTAGGTTGAAGAGTTGAGCGCGATCGCAGCATTGTTGCATTCAATCAGCCTTATCGTTGCTTGATCTGGAAATAATTCATTGGCGGTTGCTGGGAAGATAAAAAGAAGTCGGTGGTGCCAGCTTAATTTCAATAGCTTTCAAGTGGAGCGCGGTTCAACTCATCTTTATAGAAACGCCAATTAGGAAGGAATCCGTTCA # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTTTACCATTAGATGCCGTTAGGCGTTGAGCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 93554-92565 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOW010000009.1 Coleofasciculus sp. FACHB-64 contig9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 93553 37 100.0 35 ..................................... GATCATAAATCTACCGCCTTTTTGCAACGAAGGAG 93481 37 100.0 36 ..................................... CATAGTCAAAATAATGGGGAATGCGAGTCCCGTTAA 93408 37 100.0 34 ..................................... GAATTCGTTATTCCCATCGACTGTCCGAGAACGG A [93398] 93336 37 100.0 38 ..................................... TCGCACTCACTGTATCGTTGCAATCGATAACGAAGGCT 93261 37 100.0 36 ..................................... TTCTCAGCTATTTCAGGGCATCGCTCATCTACTAAA 93188 37 94.6 37 ...........................A.T....... GCGTTTCTGATTAGTCGGAATCGCAGATAGACTTCAA 93114 37 97.3 37 .............................T....... TTGGCTCAACCTTTTTCAATCGAAGTTGATTGCAGTG 93040 37 91.9 36 ........A.............A......T....... CAGTCGTGGATTCTTCTGTGGGACACCCTCCCGACC 92967 37 97.3 36 .............................T....... AACCCTTTCACGAGCGAGTTTGAAGAAACCCGTGTT A [92945] 92893 37 97.3 35 ..........T.......................... AAAATCCGATGACCGTGTTGGATCGAATTTTCAAC 92821 37 94.6 36 ................G..........A......... AGCAAGGGAGAAGAACAGGCGATCGCCTCCTATACC 92748 37 86.5 36 .................G..AG.......C....T.. CGATCGCTATCAAGTGCAAGATGCTGACAGTAGAGG 92675 37 97.3 37 ......................T.............. TGGGCAATCTTCTGGGCTTGATCTTTAAATACCCCAA 92601 37 89.2 0 ..................C.....A..........CT | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 96.1 36 GTTTCAACGACCATCCCAACTAGGGGTGGGTTGAAAG # Left flank : CAATATATTTCTTACTCATGGGAAGACTTGGTAGGAGTTAGTGCATACAAAAGCCGGATTTTTTTAGCTTAGCCCTTATTACTACCCATCAAACTACCTTTGACAGAGTACTAGGGGTGGGTTGAAAGCTTTTCTTAAGCACCCTACTAATAACTACCTCA # Right flank : GTAGGTGTTAGAGTGGGTTGAAAGGAGCATTCGATTCGTGATCGTTATGCGCTTTGAGTGATAGAGATTAAATGACATCAATTTGTCACTGCTGCTTCAGCGACATTAATTTGTCTCAACGACACACAATTCGTCACGACGACAACAATCTGTCACCGATGACAAATAATTAGTCACTGTACAATTTGATTCAAGCCGATGGGCGGATTTGAACCGCCGACCGTTCGATTACGAATCGAATGCTCTACCACTGAGCTACACCGGCACTGCCGATTTACTATCGTAGCAGGTTTAGATAGAAACTGTTGCACCCAATTTCTGGAAGAAATGCGATCGCGTTCAAATTTATAGCACCAGCCGCCGCTGCTGCCGACCACCATCATGCCAAGATGGATCTAAAGTCGGTGGGGATCGAGACGGATGGTAGACCCAAAATTAAAAAATCGCACCCGCAACATCAAAGGCACTCGGAAAGTCAGTGCTGAACAGTATGCACAACT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACGACCATCCCAACTAGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //