Array 1 8771-8498 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCGW01000008.1 Lactobacillus helveticus strain IMAU30028 Scaffold8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8770 29 100.0 32 ............................. AACGTTTGCGTAAACTTGGCTGAATGTTGCAA 8709 29 96.6 32 ............................C AACGGCATCACTAATCGACCAAGCGCACAAGA 8648 29 96.6 32 ..........T.................. CACCATGCTGTTAGCAGATTATAACGCCCGTG 8587 29 100.0 32 ............................. TAAGAGGGCGTCAGGTCAGTTTATACGGTCAA 8526 29 72.4 0 .....................CAACCAAA | ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.1 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : TAGTGACATTATTTCTTATAAAGTAAATCAATCTGGACATGATGAGAAAAAACATCATGGTATTACACGTGCCGTTGTTGGCGGTGCAATTGCTGGAGGTGTAGGTGCCATTGTCGGTGCCACTACTGGTGGTAAACAAAATGATTATATTGATCACCTTGGTTTAATTATTACTTTAAAAGACGGTAGTAATTTTGAAATTGTATTTATTAGAAAAATTGAGCAAGAAAAAGCCAATAGCTTTACTGCCAGAGATGACATTCAAAGGTTTAACACTTTAGTTTCTATGATTGATGCAATCATAGCTAAAAACAATCAAACTGCTAAAACTACTTCCACAGAGAACACTAATCCTGATCCGGCTGATGAAATTCGTAAATTCAAGAAATTGGCTGATGATGGAATCATTACTCAGGACGAATTTGAAGCTAAAAAGAAGCAGCTTTTAGGGCTGTAAAACAAAAAAAGACTCACACCAGAGAACTTAATCTCCGATGTGA # Right flank : AACAGGACTAACTCAACCAGATTAGTCCTGTTTTTCATCTATATTAAAATATTTCTTCGCTGCATCGCTCATGCGATCAGGCGTCCAGACCGGATACCAAACAAATTCAACATCAACATTTTTTACTTCCGGCACTTTTTTAACTGCCTGAGTAATGCTATCAATTAGGTAGCCAGTTAACGGACAAGCAGGGGTAGTCAAAGTCATATTGATTAAACAGATTCCATCTTTGTCCAGATCGATTTCATAAATTAAACCTAGATTGACTACATCAACATTCAATTCTGGATCGATAACTGTCGCCAATTGATTGATAATATCGTTTTTAATTGTTTCACCGTCACGCATTTTATCCCGCATCCTTGCCAAAAATTTTAGCTTTGATTGCTTGGCCGGTTGGAGTACCAGCTAAGCCGCCGATTCCGGTCTCACGCAGGGATGCTGGCATTTGATGACCAACTTTTTTCATAGCATCGATACATTCGTCGGCTGGGATCACG # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.50,-9.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //