Array 1 47230-45570 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANMW01000068.1 Leptospira interrogans str. 2002000632 ctg7180000006581, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================================================================================================= ================== 47229 36 100.0 36 .................................... AATCTGATTGAAAAGGTAAAAGAGGAATTTTGGCCT 47157 36 100.0 37 .................................... GAAAAATTCTAGGATCTTTTTTGCGATTATCTGGCTT 47084 36 100.0 36 .................................... TTGATGTTCCTGATGGTGCTTTGGCAAGTCCCGGCT 47012 36 100.0 35 .................................... GCTACAGTCGTTCGCGTCCAGGAGGATCCTGATGA 46941 36 100.0 35 .................................... AGCATATACCAAAATGGAATGGTCGAAATCCTTCC 46870 36 100.0 35 .................................... ATCTTAAACGGATTTAAGAATTCAAACGATTGCGT 46799 36 100.0 35 .................................... ACCCAGTGATGCGGCGTATGCCCCGCGTATTATGT 46728 36 100.0 35 .................................... TTGTTACATTGACAGCTGGTCCCCTGAAATACGAA 46657 36 100.0 35 .................................... AATCAGTTTTTGATTTAGCTGTACGACAGCACCAA 46586 36 97.2 34 .....................G.............. ATTCGGAAGACGTAGAAAGCGGATTTGAATTCAT 46516 36 97.2 35 .....................G.............. GATCGACCGTTGTAAAGCGGTTGAAACAGAAAACA 46445 36 97.2 36 .....................G.............. AATTCCCCTTCTCCGTTCGGGAACGGGTTTTTTTCT 46373 36 100.0 36 .................................... ATTCCGAATTATCCTAAAATCAGACGATCCGAAAAA 46301 36 100.0 38 .................................... ATCGAGAGATACGTCGATCGGACGTTTCGTCTATTCGT 46227 36 91.7 157 ..............................T..A.T GAAGAGAAGATTTGTTTTAGCCCAAATTGTTTCGCACCAAACGTGCAAACAGATAAAATGTAGGAGCTACCTACTTTTCCGAAAAACAGTATTTTGTTCAAATAAATGTGGGAACTCCCACTTTGAAAAAAGAAGGTTTCTGCGTCTCTTAAGTCAA G [46198] 46033 36 69.4 35 ACTT.C.A..A.CG.G.....G.............. TTGATCGGTGCAGTTGTGCTTGTTTTGATTGGTGT 45962 36 100.0 36 .................................... ATAAATAAGATAATTGTGATATTGATTGATTTCATT 45890 36 97.2 37 .....................G.............. TTTGGGGAACGCTATCTCCTATCGATTGGGTTATAGC 45817 36 100.0 35 .................................... ATCGATATTTCGCCTCATTTGAAAAAGATAGCAGA 45746 36 100.0 34 .................................... GAAGGGCTACATGGTCGATCGGACCCGTGAGGAT 45676 36 100.0 35 .................................... CTTGGCGCATGGCCTTCGTAGAAGGGAATTCCGAT 45605 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================================================================================================================================= ================== 22 36 97.7 41 CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC # Left flank : AAATTGGCAAAAGTCACCGAAGAAGAAGACAATATATTTTATCTGACTCTTTGCACCAAGTGTGCTTCGGGCGCCCATACCCAAGAAAAAAAATCCGCGTGGCCAGAAGCTCCAAAAACATTAAAAATTCTATAATTCAAGTATCTCTTCAGGGCATAGACATAATTCTACTTAAAAAGCAAAACTAAATCTTTGAATCTATATTTAATTCCAAGACATATCCAATCTTTACTCGGATTCAGAAATAGACCCTATCTAATGATTGGCCAACGCTCGTTTTTCTTTCTTGTGAAAATTCCAGCTAAATTTATAATCGGTGACGAGCTTAAACATACTTGAATCTTAATATTTGAAACAAAATGATCCTTGGAAACAAAATATGCACTTCTGAAAAAACCGAACATGAAAAATAACGATAAAAAACGATATACTTGTTCTCCTCCTTTGAAAACACTCATATCCACAATTTATGCTTATAAAAGCCATTTAAATAAAATGCT # Right flank : TTTGCCACTGTAATTGAAAGAACTGGTTACACAAATTCGATCTACCTCTGATGCCGTTTAGGCGATCCTTTCAGAAATTTCCAAATACTATAGAGAAGGTATAGCATATTATAAACATGGCATGTTTTTTAGGATCTTAAAAATTTTATTTGATTTCAATTTTAGAATATTCTAAAAATATTTTGTCTTTAAAAAATAAAATGGAATCCGAAAGATGAATTTCTCCGAGTATGTTGTATGTCCTTTCCGAACGTCATTGAGTTAAACTTTCCGGTCCTTGGGTCTTTACTCCCAGTCGACCACGGTTATGGGCTGTATTCCGCCATTTGTCATCTTTGTCCCGAATTACACGAGCACGATCCGCTTAGCATTCAAACGATCTCAGGCCTCCCGGATCGACCCGGAATCCTTCGACTAACAGCCAATTCACGACTGAGAATTCGCATTCCCATAGAACAAATTCCTCTTGTGTATCCTCTTGCTGGAAAAAGTCTTACGAT # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.54, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //