Array 1 4473-2523 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUBK01000016.1 Apilactobacillus micheneri strain HV_61 scaffold_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 4472 36 100.0 30 .................................... CCGTAAACTATTTTTACATGTAATATAGGA 4406 36 100.0 30 .................................... CACGTTTCTTAGGCTTAAAAATTAAGTTAA 4340 36 100.0 30 .................................... CAATTATTTCATTTTTTAAAAAAGTATTTC 4274 36 100.0 30 .................................... TCAGAAGATTCAAGCAATGATTCAATCTGG 4208 36 100.0 30 .................................... AAGTTAGTCTATGACCGTCCTTACTACAAC 4142 36 100.0 30 .................................... TAATGATAGTAACTTAAGCTACGATAATAG 4076 36 100.0 30 .................................... TCATAAACATAATAATAAACAAGTTAATAC 4010 36 100.0 30 .................................... TCTAGGGCTACAGTGCAGTCACTAGAGAGT 3944 36 100.0 30 .................................... CAATGTTGATATTTTGTTGAGTGAGAATCC 3878 36 100.0 30 .................................... GAGATTTTAACCATGCCAACAGTACCATAT 3812 36 100.0 30 .................................... ATCAGCTTCACCAGTAATAGCTAAATTAGT 3746 36 100.0 30 .................................... TAATTTAGGTGATACTGTTCAATTATGTAT 3680 36 100.0 30 .................................... TGGTTTATATACAGACGTAGAAGAAGCAAT 3614 36 100.0 30 .................................... TGTAGGTAATGCTTCTAAGTCTTCCCATTT 3548 36 100.0 30 .................................... GATTGGAAGATTCAAATTGGCTGATGATTT 3482 36 100.0 30 .................................... CGCTGGAATGTTTAATAAATCTGTTTTTGG 3416 36 100.0 30 .................................... CATTAGTGCCACTTCATCAAAGTAAAACCC 3350 36 100.0 30 .................................... ATGGCTCTTGCCGTTTCAAGTTCTGCTTTT 3284 36 100.0 30 .................................... TGTAGTATCTTCTGGAACTTTAGTACAATC 3218 36 100.0 30 .................................... GCCACGGCGAGTTAATTCTTCATATCCAGC 3152 36 100.0 30 .................................... ATTACTTTGAACAAGTTCAAGCTGATCGGA 3086 36 100.0 30 .................................... CATTCTAAATAATCTTTTAAGTCCATAATC 3020 36 100.0 30 .................................... GAGCTAGATAATGACTTTTAATGTTTATGA 2954 36 100.0 30 .................................... GCTGAATCATCATCAGAAACACTTGGTTCT 2888 36 100.0 30 .................................... CACGAACACTTGCTACACCATCTTTAGTTA 2822 36 100.0 30 .................................... AATTATCTCCTTCCATTTCTAACCATTTGT 2756 36 100.0 30 .................................... GGTACAGGTAAAGACGTAGCAGATGAATTA 2690 36 100.0 30 .................................... CTACAAACCATTTCCTGATGATTCATTGGC 2624 36 97.2 30 ....................T............... TAGCACATATAACTATATGAAAGGACTAAA 2558 36 94.4 0 ........................A..........T | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.7 30 GTTTTAGAAGTATGTTAAATCAATGATGTTTAAATC # Left flank : GATATTAATAAATATTATAAAAATAAATTGATTAATAGTATTGATAATAATTTTAGTGAAAAAGAAATTAACTCCATTCATAATGCTAATCGAGAATTGGTTAATAAAATTCAAAAGCATTTATTTATGTACGATCTACCAATTAAAGTTGATTATGATAATGATTTAAAAAGAATTCTTAATTATTCAAAAATCCATTTTGATAATTATGCTATCAATAATCCTTATGATAAAATAAGTATGTTAATAAAATTATGTCTAGAATTCAAAGATTCAGCAGTTTTGGCTGTTACTAATGTATCTCATTATTTAACGCCAGAACAAATTGATGGGATTGCAGATTTATGTAAAAGTTCTTCAATTCCATTGATAATGATTGAATTTACAAATTTAAAATCTAAGGACGATTATAAGCATTGTAATTTTTCATATATAGACCAAGATTTCGTTGACTGGTATTAAGGTCATAAATAATATTAAACAATTATGAGAAATTAACG # Right flank : ATTTTATTACTAAAAGGAGCGTTAACATGACCTTAATTATTTTTCCCATATTTATTTTGTTTTTAATCATATCTTTCTTTAGAACAAAGTTTAGAAAAATATCTATTGCAATATGTATACTAACTGGGTTGCTTTTATTTATGCTGGTTTTATCAGGAATTTCAATGGCCAGATAATTGATTTTCAAATCTATGAATAAGAAGGAAACTAATACGATTAATTATTTCTATAATTTTATTATTCTTTTTTGGCTATGCACTAATAACATTCCTTACTTAACTTTTATAAACTAATCTTGGAGGATACATATGGATTTCTTAAAACTACTATCATTTTTCGGTAATGGTATTAGTTTGATTTTTAGAATGTGGAAATTAATCTTCTTCATTCTATGTTGTATTGCTATGTTTAATTTATTAGGTGGCGATGATGTGGATTGGGAAACTGTTGGTCAATACACATTATTGATCGTTATCTTTATTGCTTTTTGTATTGTCATT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTTAAATCAATGATGTTTAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //