Array 1 220742-219831 **** Predicted by CRISPRDetect 2.4 *** >NZ_FONN01000003.1 Paenibacillus algorifonticola strain CGMCC 1.10223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 220741 33 100.0 34 ................................. TTTGATCTGAATTTGAGTCTCTTCAAGCTGCCTC 220674 33 100.0 34 ................................. ACAAAACTGAAATAGGATGGTTGGTTATGAGAAT 220607 33 100.0 35 ................................. CAAAAATCAAAAAGAAATTCCCGACTTTTTAGGTC 220539 33 100.0 34 ................................. GCGTCACCAGCTGTACCAGTTAATCCAGTTGGAG 220472 33 100.0 36 ................................. GAAAGCATTGAATCGTACAGCGGGTGAGCGTATCCC 220403 33 100.0 34 ................................. AGGCGATAAGAGACCAACATTAATAATAGATTCA 220336 33 100.0 35 ................................. AGTCCATTTTGGTTTTTGCACCCCCCCTGTTAGTA 220268 33 100.0 34 ................................. CGGTATTCGTCGTAATTGGCTGCTTCCACTCTGA 220201 33 100.0 35 ................................. ACCAGAATCGGTAATTTTGGAGTCGGTGTTAGAGG 220133 33 100.0 35 ................................. AGCCCCCGCTTGGCCTGTGACTTGTTGCACCGTCG 220065 33 100.0 33 ................................. AATAAAAACAAATAGACCGCCCTCGGTCAAGGA 219999 33 100.0 35 ................................. TGCTTCTTAATGCGGCGCAAGAAATCCTCGACAAT 219931 33 100.0 35 ................................. TGTAAATGGCCATATAACGTCTGAATACCATTACC 219863 33 90.9 0 ..........A..C.....A............. | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 99.4 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Left flank : GGGGGCTGAAGAGGGAACTTCTGCTGCTAAAGGAATCGGGAAACAGGCTGACAGGAACATGGCTGCAACGGGTCGTAGTATAGGCGGAGCAAAGACGGATACTGAGACGAGCGCTTCAAAGGCTGAACCGACCGCAGGGAGCGAGGGAACGAAGCCGCGCCGGGGAAGGCCGCCGAAAAACAAGGCAGTTGCTGAGGCAGTTCAGGTAGCAACAGACGCTGTCCCGAGCAAGAGTCGCAGACGTTTGTAGAGGGGGCTGGTCATGTGGCTGCTTGCTGCGCGGCTTGGAAAAAGGGATGCTTCCCGAAGTTCGCTTCTGGTGCGAATGTGAAGCTCCCATGAAATCCCTAGGGGATTCGCACCTCAGAAAATGTCGATATGTGTCGGATTTTAGAAATTCTTTAAAAAGTCAAGGTTTTAATCATATACGCTTAGCATTATTTTTCTTGAAAAGATTATGAATTAATGCCAAGATGGTATCAATTGTATGTAATTTCACG # Right flank : TTTACGACGCTGCTGGGCATGCTTGTCTTTTGCAGTCGCAGTCATGAGAACAGTCTCAAAATAAAAGAGTCTATCTATCTGGTAGGCTCTTTTAGACATTGGCTAATACCGTTTTTCAAGTGTCTCTGCTCACCGCTATCAATGTATATCAACTGAGCTGCCAAGATCATTTATAAGACCCAAGTCTCTTAAGATTCATAGATACTTGTTCTGACAACGCATCGTTAACCACTTCGTATGGAAAGGCGGGTTCCCTTTGTTTAAGATAACGGTTAGTCAATCCGAAAGGCATTTATTTTCATCCGGATGGATTGAGGGATTCGATTATCTTTTTCATGCTAATGGCGATTCAGATGGGGTTGCAACCTGTTTGCTGAATTTCTCGGATATCTATGCACCAGAAAATGTCTCAGTAAAAAAGAAGGCCCCAATCGAAATTAGCTACGAATGTGGCGACTTGAGCTTTGGGATGTTTGAACTGCTGGCAAATCAACCGCTTC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA // Array 2 225903-224997 **** Predicted by CRISPRDetect 2.4 *** >NZ_FONN01000003.1 Paenibacillus algorifonticola strain CGMCC 1.10223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 225902 33 97.0 36 ....................T............ CAATCTTTTGTCGCCAGCATCTCATATTCCCTGCAA 225833 33 97.0 34 ....................T............ TTGTCACCCGTCTCATTAAGTAGATCAATGACCA 225766 33 97.0 33 ....................T............ TTGGCCTACAACGTCAAAGTATTAGGCGAAGGT 225700 33 97.0 35 ....................T............ ATCGGGGTTTCGTAACCAGCTCAAAATCTGGTAAA 225632 33 97.0 34 ....................T............ AACGAGGTATGCATGGAATTGGATATGCTCAAGC 225565 33 100.0 35 ................................. TTGAAAACTCAGATTTGAATTCTCAGGATTTTTTT 225497 33 97.0 34 ..............A.................. CGCCGTCTACCAGCTCGATATGAGGCTCTTTTGC 225430 33 100.0 34 ................................. CACTTCCGTACAAGCGCCGAGCTAATCCCCAGCT 225363 33 100.0 34 ................................. ACCTCGCTCTCAGGTAATCTACATCATAAATTGC 225296 33 100.0 33 ................................. AAGCTGCGTTAGCTTGCCATCTGCGTCTTTCAG 225230 33 100.0 35 ................................. TTTAACAACCTGCCTACAAGGTCATCCTCATGCCA 225162 33 100.0 33 ................................. TGTAAATTGGCGTTGGAGTTACAGGCATGAATG 225096 33 100.0 34 ................................. AATGTTTTTTTAAATGCATCATGTCGGTTTTTGA 225029 33 97.0 0 .....................A........... | ========== ====== ====== ====== ================================= ==================================== ================== 14 33 98.5 34 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Left flank : CATGGCACGAATGAAGCGGTAGTGGCGGCGATTTTGCGCGAAGGCATTCAAGCGATGGGCCGCCAGTATTGCCATCTGTCGGAGGGGCTGGATTTTGCAGCCCTCGCGGGCAGCCGCAAGGGCAAGCTCGTGATTTTGGAAGTGGATACGCAGCTCGCTGCAGAGCATGGCGTTATTTTTTATTATGCAGGCAATGAGGTTTGGCTTGCAGAGGAGATTCCGGCGGCATGCTGTCGGATATATGATTTGCCGATGGATACGGAGAAATCTTAGGCAAAAGAGTTACAATTTTAGCAGAGGTAATCGTAGCCGTTTTTTGGTGCGAATGTGAAGCTCACATGAAATCCCTAGGGGATTCGCACCTCAGAAAATGTCGATTGATGTCGTTTTTGAGGGAGTGTTTAAAAAGTCAACATTTTAATCATATGAGCTTAGCATTGTTTTTCTTGAAAAGATTATGAATTGATGCCATGATGGGATCAATTGTATGTATTTTCGCT # Right flank : GTTATATCAAAGGCGCAGTTCTTCCATCCAGACACAACCCGTCTTTCGTACCTGCACGGAACAGTATGATGATAGGCTAAAATCGTGAAGGCCGCAAGCGATGCTTGCGGCTTTTTCGGCGTGACTGGACCATTTATGGACAGATGGGGCAAGTTTTCATTTTGTGATGACGAATGGATTGAAACGTAGTTTGCGTTGTGTGAAAATAGAGGGTAATGACCGTCTTTGCTTGTCAATGAAAGAGATCGTGATTCGGTGCTTAAACGAGAAAAGAGGTAAACTCGTTACTATATAGTAGGAGTGAAAGTGATGCAGCAGGAAAGCAAAACAGCTGTAGGTACCGGCAGGAGGCAGCTTATCGCCGTTCTGCTCCAAGGCGGGCAATATGAGCTTGATTGGCAGGAGGAGACCTTGCAGTCCGATTCGGAATTCAGCGGGCAAGCCCTTCAAGATGAGCTGTACAAGCTGTTTCGTGAAAATCCGGACGAATTTCTGCTAGA # Questionable array : NO Score: 9.04 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Alternate repeat : GTCGCACTCCGTATGGAGTGTGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA // Array 1 12373-12736 **** Predicted by CRISPRDetect 2.4 *** >NZ_FONN01000001.1 Paenibacillus algorifonticola strain CGMCC 1.10223, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 12373 32 100.0 35 ................................ TCTAAATCGGGGTTAACGGTGCTGTATTGATCAAC 12440 32 100.0 35 ................................ CACGTAAGCGTTACTTTGCTGTCTCCAGCAACACC 12507 32 100.0 34 ................................ TTAAGAGCCTTCGGCGCTTCCGGCAGCGCCACGT 12573 32 96.9 33 ..........A..................... CAGCTGGCACAATCGTCGGTAACGGCATGCTGG 12638 32 96.9 34 ..........A..................... GACAACCAATCTAAACTTGTCCTGGAGACTCGAT 12704 32 78.1 0 ............A....C.....A...TC.CG | A [12727] ========== ====== ====== ====== ================================ =================================== ================== 6 32 95.3 34 GTCGCACTCTGTGTGAGTGCGTGGATTGAAAC # Left flank : TCGGTGTCGCTTGCGCGGAAATTTCGGGGCTGTATCATCGCCTTGCGGCTGAGCAGGTGCCGGCAATTAGCGGGACAGAGCATGCGGAACGCATTAGCCAACAGATCGCGGAAATTCCGAATGAGGAGACGATTCGCGGCTGGCTGAAGCAAGTTGGTGGGCCATCCACAACGGCTGAGCTAGGTGTGAGCGACGAGCTGCTTGCCCGCAGTTTGAGCGAGGCTCATTTGGTGCGGCCTAATCGTTATACGCTGCTGAGAGCGTATAACGAAGGGGCAGGAAAGTAATGTTTTTTAGATGAAAAAGAGATTTGCGTCGCGGTGCGAATGTGAAGCTCCCATAAAAACCCTAGGAGATTCGCACCTCGAAATTTGTCGATTTATAGCTAAAATGAGTCGATTTTTTAAAAGTCAAGATATTTCTACGAACGTTTTAGTATTATTTTCTTGTGAGTTAGATAAATGAATGCCATATTGGTACCAATTTATCTATTTTTCGCT # Right flank : GTATGTAAGAGCACTATCCTAAAAGAGTAGGGGCACCTACGATATCTGCTCACAGTTCCATTATTAACAGCTCAAGAAGCCTTGGTATATAAGGCTTTTTTCTGTTTTTGTAACATTACTAAAATACATATTTTACTTCTCAAATAGGTGACACTATCTTTTTAAATTAGAAGCTCGCTGGAAGGTTTACATTTGGGCAATATGCCACATGGTTTTCGAATGATGTGCACTTTATTGTGTCGTTGGAGCTATTACACTGGTTGTTATACTAGGTTGTGTATACAAACGATAAGGGAGTATCAGGAACTTGGCGGACACAGAATCCGCTATTTAACCGGTTATAGGTTTATCGAGAATTAGGCGGACTCAGGAGCCGCTAATGCTTCGCCAATCGCCATTTTGACATGATTATGAGGGCAATAGCGGATCTCCTGTCCGCTTACGGGCTAAAATCGTATAAAAAGCTAAAATAGCGGAACCTCAGTCCTTCAAAAAAGGAA # Questionable array : NO Score: 9.02 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTGTGAGTGCGTGGATTGAAAC # Alternate repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 216475-216110 **** Predicted by CRISPRDetect 2.4 *** >NZ_FONN01000008.1 Paenibacillus algorifonticola strain CGMCC 1.10223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 216474 33 97.0 35 .............C................... CGAATAAGTTATAACCAACAGTTGACAAACGCGAC 216406 33 100.0 33 ................................. ATTTCCTCCAATTAGAATAATTTATTTTTGTTC 216340 33 100.0 37 ................................. TAATTTTCCTAATTATAATGGAGGTATGTGACATGGA 216270 33 100.0 33 ................................. ATACACAGTCCAGTTTGATGCCGTGTTAGACAC 216204 33 100.0 29 ................................. ATTGTAGCCTCAAGCCTTCGCAGCATGAT 216142 33 97.0 0 .......................A......... | ========== ====== ====== ====== ================================= ===================================== ================== 6 33 99.0 34 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTCCGTACGGAGTGCGTGGATTGAAACGACGCTGGGAAAGTGATAGAGAAGCGTGGCTGA # Right flank : CGCATATAGTATGCAAAAAGTATGATTATTTTTAATCTATATCTTCTTCCGATTCCAACGATCAGAACCTTACGCTCCTACCTCTCTTGAAAAAACGGAGCGCCTTTAATCCAAAAAACACCCGAAAATCCGCTAGAACAGCGATTTTCGGGTGTTTTTTGCAATGCCCTTTTACTATTTAATATACACGCTGCCAAACGGCAGCACTTCACGCAGCAAACGCTTGAAAAATCCGTCATTTTGCAATGGATGCTCCAGGTCTTTCCCATGCGAGCCGGTCTGAATAAGGACAGGGCCGCTGCCGGTTATTTTCCACTGGACGTTCATGTTCTGGCTCGCCAGCTGATTGCCGTAGACGGCTAGCTGGATGCTCGCATTCGCGGGATAAGCGACGAGCGAGCTAGTATTTACAAAAAGCGGGCGCTCCTTGTCCAGCTGGAGCACCGCAATATCGCCGCTTGTGATGACACCAAGCTCGCCGGGGCCGGAGAAACGCATCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA // Array 1 215904-216138 **** Predicted by CRISPRDetect 2.4 *** >NZ_FONN01000005.1 Paenibacillus algorifonticola strain CGMCC 1.10223, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 215904 33 100.0 35 ................................. CCGTCACGACTCAGTTGCGCCAGCATGATAAAGGG 215972 33 100.0 33 ................................. AAAATAAAAAGCCGCTCATTTGAGCGACCTATA 216038 33 100.0 35 ................................. ACAGCGTCCAGTAGCGCGACAAGTCGTTCGGGAGC 216106 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 4 33 100.0 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCCGTATGGAGTGCGTGGATTGAAACTTACGACGGCTTGGGGATAAGGCAAAACAGGGGC # Right flank : CTGCTTTTGCTGCTGCTCCTGACTAAAAAGTTGTGTGCTAATGGTATTAAAGCTGTGTATTAAGTAATAAAAAGGTTGCCGTAGTAATTAGCACTATACTCAACTAGAAAAGTCCCGATGGATTAAATCGGGACTTTTCTGTATTCAGGGGGCAACTGTTGATCTCAACAATTGGGAACGTATTCGTACAATCAGAAAATCAAACAAACTCAGTCAAGTTGAGTTTGCTAACATGGTTGGTATATCCCAAGGCACATTAAGTTAGTTGGAGCAAGATAAGTATAAACTTAGAGTAGTTATTGCCGGTTTGCTACTACTTTAAATAGCTGATCCATTTTTTGTTTGTTTGAGATATATTTCCCGATAAATTCCTTTAAATCATCTGTAGATTCAAATTCCTCAAGAACGTGACCATCGTACCATTCCTGGAGAAACTCACGGTGGATAACATATGTCTTTTCCTCCACAGTAAACGTGATTCGGTCTACATTTGGAATCAG # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 2 293446-292878 **** Predicted by CRISPRDetect 2.4 *** >NZ_FONN01000005.1 Paenibacillus algorifonticola strain CGMCC 1.10223, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 293445 33 100.0 33 ................................. AACTTGAAGGATTGGAGATAAACGGAAGCAAAT 293379 33 100.0 36 ................................. AAACGTTGGAGGTGGAAATAGTGTCCGAGCGTGGAG 293310 33 100.0 34 ................................. ATCTGGATCATCCACATAATGCACAATTGGCTTA 293243 33 100.0 33 ................................. CTTAAGGTCATTAATAGCCTGATCGGACGGCTT 293177 33 100.0 34 ................................. ATCTGGATCATCCACATAATGCACAATTGGCTTA 293110 33 100.0 33 ................................. CTTAAGGTCATTAATAGCCTGATCGGACGGCTT 293044 33 100.0 34 ................................. GATGACTAGATCAAACCAGTTATCTTTACCTGTT 292977 33 100.0 34 ................................. ACTTACTTATGAAGATCTTGAAAATAAACTCTAT 292910 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 9 33 100.0 34 GTCGCACTCCGTATGGGGTGCGTGGATTGAAAC # Left flank : TTGTCGAACCATGACGAAAACGAGCTACTCTACAAAAAGTCAAGCTTACTCTTATCTTTTTTCGATATTATTTCGTTGAAAATAGCGGCGATTAATGCCATGATGGGATTAATTAGTACAGTTTTTGCTGTCGCACTCCGTATGGGGTGCGTGGATTGAAACAGGAAGAGCCGGTTCGGCTCGATCGGCATGTTGGCGTCGCACTCCGTATGGGGTGCGTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCGTATGGGGTGCGTGGATTGAAACTGAGATGTTAAATCTGGAAACCCGGCTTGATTTG # Right flank : AGGAGTCGATGAGTAATTCCGAAGCATACAAAAGGATATTTGACGAAAAAATTAGGTTAATAAAAGAGGCTATTGTTGAAATTCATTCCATACAAAAACAAATATCTATTACTGCTGTTGCTAGTTATTTAGAGATTAATTTTATACATGCAAGTGATTATAAATCTATAAAAGAAATGATAAAACGAGCCTTTTCTCACTATTTTGAAAAAACGAGTCAAGCAACACTCGTACGAGACTATTAAAAAATATATTTTCACAGAGTGATTAAGTGAAAAAATATAACATACCATTTATAGGGCATTGGAATTGTATTTGCGATGAATTTCAGGTCGGTATGCCTTTGTTTTTTACTTCATGCCTCAACGAAATGTGGTTGACTGGGTATTGCTCGAAGTATATTTTGAGAAACAGAAAGGAGCTCTAAAGATACGTATTTACGTCCTTAGAGCTTTTGGGTAAGGTGCTAATACTAGGTTCCTCTTACAACAACTAATTCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : NA //