Array 1 254294-251954 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSOD01000002.1 Ruminococcus bromii strain TM10-21 TM10-21.Scaf2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 254293 36 100.0 30 .................................... ATTCTCGAAGTCATTAAATGTTCTGATTGT 254227 36 100.0 30 .................................... GCTATATTTAAAGCTGATAACATAGGTACA 254161 36 100.0 30 .................................... TTGAAATTTGTCTTATCTCTTTTCTTTGAT 254095 36 100.0 30 .................................... GATTTTTCTTGTTTCTCTTTCTGAAAGATT 254029 36 100.0 30 .................................... TTCTAAATCTGCGATATTCCTGTAAGAGTT 253963 36 100.0 30 .................................... CCGTGTGTTTTTGGCATTGACTACACCAAA 253897 36 100.0 29 .................................... AGGTCTTGAAGCCCAAGTATCGACGGACA 253832 36 100.0 30 .................................... ATCCGATGTATTCGCCGTCACTTAACAGGA 253766 36 100.0 30 .................................... GTTTCATAGCATTAACACACCTTTTATCAC 253700 36 100.0 30 .................................... TTACGCCAACAGTCCAGCGCAATGTATCTG 253634 36 100.0 30 .................................... TGAAATAATTGTTAAAAAAGATAATAAACA 253568 36 100.0 30 .................................... ACTTTGACCTCCATTATTCAATAATTTATC 253502 36 100.0 31 .................................... TTTACTCTGCCGTCTGTTTCTGCACGGTCTG 253435 36 100.0 30 .................................... CAAGGCTGTAACACTCGTCAACTTGTGCTT 253369 36 100.0 30 .................................... TGTTGCCTGTGAATTTTCTTCCGCAGTTAA 253303 36 100.0 29 .................................... ACACGCCACAAGGTTCGGTTGGAAATCTG 253238 36 100.0 30 .................................... CCACAATTGTGAATCCGCCTGACCCGAATT 253172 36 100.0 29 .................................... ACACTACGAACCAAGACTATTCAAGCCTA 253107 36 100.0 30 .................................... TGGCAGATGATTCAGCTTTTGCCGAGTAGT 253041 36 100.0 30 .................................... ATACGCTCTCCTGTGTCTAAGTTGATTCCG 252975 36 100.0 29 .................................... CACACGGCGCAAGCCGTTGACCGTCATTT 252910 36 100.0 30 .................................... TTACCAAGCATAACACAACAGGACGGTTGT 252844 36 100.0 30 .................................... AACGGATTGAATGAATACAGAGGGAACATA 252778 36 100.0 30 .................................... GCCCGATTTGAAATATAAAGCTGTGCCGTC 252712 36 100.0 30 .................................... TCCAAAACACCGAGCCGTGCAGCCATTGCG 252646 36 100.0 29 .................................... TTCGTTCGTATCGTAATAATACTCGTTAA 252581 36 100.0 29 .................................... CAATCCTTGCAAAGACACTCAAGATTGTT 252516 36 100.0 30 .................................... AGTGTACATTTTTGAAGTGATTATCACCCG 252450 36 100.0 30 .................................... TTCGGCAAGTATGTGTTTATATAAATTTCC 252384 36 100.0 30 .................................... CCATACTTTCAGATAGTGCGTGTCACCGCT 252318 36 100.0 29 .................................... GAAAAATGCGATAGACAAAAGCGGCTGAG 252253 36 100.0 30 .................................... AACCGGATCAAGAATTTCATCACACAAGCC 252187 36 100.0 30 .................................... TCGCAGGCTTGCTAAAAGCTTCGTCGCAGG 252121 36 100.0 30 .................................... CGGAGCTTGCAACCCACTCCGAGGACGGCG 252055 36 100.0 30 .................................... GGAGAGAGTAACAAAACCACTTATCACGCA 251989 34 88.9 0 .......................T...--......T | C,A [251957,251968] ========== ====== ====== ====== ==================================== =============================== ================== 36 36 99.7 30 GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Left flank : TTTTTTTGAAAATTTGTGTAATACAAAATATTTTCCGCAAATTTCAGAAATTAAAGCTTTATGTGTGAGCTTGTGCTGCGAGCTTTCTAAGGAAAATGATTATGATTTTCAGTTCTGCGAAAGTATCGAAACAATGGCATTAGTAAAATTGTTTTCATTTGTGCCTGCAGATGCCTCGGATGATAATGTCGGTCATCTTTTAAGATATTTCAAACTTATGAAAGAGTATCTTGGAATAAAGTGTTTTATTGTTCAAAATCTGCATATTTATCTTGATGACAGTGAATGTGAAAATCTTTTGGAATCCGCCGTTATGCACGGTATATATTTGCTTAACATTGAAAACTCAGTGCCGAAAGAAGTTTCTGAATACGAAAAACTTGTTGTGATTGATAATGATTTGTGCGAATTTTATTGACAATCATTATACAAATGTTATAAAATATCCTTATAGATTTGCCGTGTACAGTATAGTGGGTGCATTTTATTTTCAATTTGAG # Right flank : TTTACTCGTGGACTGTGAAAAAACAGCATTGCAAAAAACAATATGGCACATAACCGTTATCACTTTCGGTTATGTGCCTTTTGTAGTTTAATAAGTTTGTTAAGAATACCACGATTGATTACAGTCCAAAACAAGGAAGATTTCAGTGCGTTAATTTCCAAAGTAAGTTTCACCGTGGAAATTACTTTGGGGATTAACTATTTACTTTTTCGTTTAAATTTGCGGTAAATATGAATTGTATAATCCGTTTTATTGTGTTATTATGTAGTAAAATAGTGTGCAACATTGGTGTTTTGAAAAAAATTATGTTGCTGAAATTAAACTTGAAATAACTGACGGGTGGCATATGGTTCGCAAAGTTGACAAAACAAAGCTTCTGACTGTTGTTGGGATAGTTATATTCCTGTTTGGAGGTGCGGTGAGAATTTTTTCTCATCTTACTTCCTCGGCGGATAATTATATTGAAAATTTTGATGTTATTATCTTTTCGGGGCTTATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //