Array 1 523229-522360 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJJYA010000003.1 Enterobacter hormaechei subsp. steigerwaltii strain NMI2959_20 NODE_3_length_593432_cov_38.308062, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    523228	    28	 100.0	    32	............................	TATAGAAAAAATGAGGCAGGGGAATCCTGCTT 	
    523168	    28	 100.0	    32	............................	AGCTGCGAAAATCGCAACATCTGGCAGACATA 	
    523108	    28	 100.0	    32	............................	GATATTAAATGCGGCGATGAGTCGTTCAGGGT 	
    523048	    28	 100.0	    32	............................	TGGGTAATGTTCCAGTTCGGTACAACACCTAA 	
    522988	    28	 100.0	    32	............................	GGTGACTATGACGGCGCGGCTGATGAGTTTCT 	
    522928	    28	 100.0	    32	............................	GCCTGCTCAAATACAGTGCGCATGCGTACCTG 	
    522868	    28	  92.9	    32	..G.........A...............	AGGCGGCAGCGGTCCCTTCTCAGGAACGCTGG 	
    522808	    28	  92.9	    32	..G.........A...............	CGTTTGAGAACCTTCGCCGCAAGGGCGTAAAC 	
    522748	    28	  92.9	    32	..G.........A...............	TTAATCTGGCGCTCGCTTAATCCTGTTCTCTC 	
    522688	    28	  96.4	    32	..G.........................	ATCGTGGTTTTGACTCCCTTTAAGCTGTCGTA 	
    522628	    28	 100.0	    32	............................	TTTGATTTGAATGGTAGTGGCTTGCCGATTGG 	
    522568	    28	 100.0	    33	............................	CAGGTCTTGTTAATGATGCTGTAGCCCATCTGA	
    522507	    28	  96.4	    32	...........G................	TGGCTGTCGGTGTACGAGTTGGCATCGATAAG 	
    522447	    28	 100.0	    32	............................	TTTCCCGATATTCCTCAGCGATCCGCTGCGCC 	
    522387	    28	  75.0	     0	............A.......TAGGC.C.	|                                	
==========	======	======	======	============================	=================================	==================
        15	    28	  96.4	    32	GTTCACTGCCGTGCAGGCAGCTTAGAAA	                                 	       

# Left flank :   CAGGAACCTGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACTTCTTCATGGCGGGTGGGCATCCACTCAATAGTTTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAATCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACAGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTATTCTTTATGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGCGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGATGCATAAGTTATTGATTTTATATGGTTGGGCTGATGGGGAATAAAAAAGGGTCTGGAGGAAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGGTGTAGATTGTTTCA
# Right flank :  ATGTAGGCCGGGTAAGCGTAGTGCCACCCGGCAAAAAGCCCGGTGGCACTACGCTTACCCGGCCTACAGGGTTCCAAAGGCAAAAGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTACAAAGGCATATGCGCTGGCCAGCATGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGAGTTACAAAGGCAAATGAGCTGGCCTGCACGGACAAAAAAGCCCGGTGGCGCTGATGCTTACCGGGCCTACAGGTGAACCACGACAGATTATGCGAGCACAAGATCGCCCTGCGGATGGCACGAACATGCCAGCACATAGCCCTCCGCGATTTCCGCGTCGGTCAGCGTCATGGTGCTGGTGACCGTGTACTCACCGGAAACCACTTTGGTCTTACAGCAACCGCACACCCCGGCGCGACAGGCCGCTGCCACCGGTACGTTGTTGCTTTCCAGCGCTTCAAGCA

# Questionable array : NO	 Score: 6.08
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTGCAGGCAGCTTAGAAA
# Alternate repeat :   GTGCACTGCCGTACAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [8-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [38.3-61.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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