Array 1 21070-19186 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBTH01000001.1 Pediococcus stilesii strain FAM 18815 FAM18815_scf0001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21069 36 100.0 30 .................................... ATAATTTTTATTCATTAGAGCGAGTGTTTT 21003 36 100.0 30 .................................... ATGGTTGAACAACTACTTGACGTAAGTTTG 20937 36 100.0 30 .................................... ATTTTCAACAATCAACCCATCTTGAATCAT 20871 36 100.0 30 .................................... AAATCTAGTAATGGTCAATACTACTTTGTT 20805 36 100.0 30 .................................... AGAACTCGCCTTGCCCACCGCTTACTGTCT 20739 36 100.0 30 .................................... TTTATACAACAATTTCTGGTCAGAATGGCA 20673 36 100.0 30 .................................... AAGTAACTAGTGTTAAAAATAAGAATACTG 20607 36 100.0 30 .................................... CTTATGGCTATCTTGCAAGCCACGGTATTA 20541 36 100.0 30 .................................... CATGTTCTAGGGAGGCGTTTCAATGGAAAT 20475 36 100.0 30 .................................... CTTGGAATCTCTTCCAAATTGCCAACGTAA 20409 36 100.0 30 .................................... AAAAAGGCATCCGGAGAAGCTAGCCAGGCA 20343 36 100.0 30 .................................... AAGCTTATCGCTCATCTCATCCCTAATACG 20277 36 100.0 30 .................................... GCCCGACGGCATGAAGAGTACTGGCGAAAA 20211 36 100.0 30 .................................... TACACAGTTTTGGGAATTGCTCAACAAATA 20145 36 100.0 30 .................................... ATAGTTTAAATGATATCGAAATTGATTATG 20079 36 100.0 30 .................................... TTAATTTTTGCGTGTAACGTCTCATCTTGT 20013 36 100.0 30 .................................... CCTTTATGGATGTTATCGACCGTTTTCAGG 19947 36 100.0 30 .................................... GCAACAATTGGATTAGCAACTATTGCTGCC 19881 36 100.0 30 .................................... ATGAAGAAATGGTACCAATAACTATTACTA 19815 36 100.0 30 .................................... TAGTTTATCCAGATATGCGGCCGGAGTTTG 19749 36 100.0 30 .................................... TGGTGCGGAGTAGATTAGATTCTTGTCGTA 19683 36 100.0 30 .................................... TAGACTTGGAAAAGTTATCCTTGTCTAGCT 19617 36 100.0 30 .................................... CCGGTGGATCGGTAACCGTTGCTCGTCCAA 19551 36 97.2 30 ..........A......................... AAGTATCCCGGACTCATTGGTTTACCATAA 19485 36 100.0 30 .................................... TTTCGTCGGGAGGAGATGCTGTAATGGATC 19419 36 100.0 30 .................................... ATCCAAAGTGAATATGCACATGGTTAGTGT 19353 36 100.0 30 .................................... TTTTGCTAATTTTTTGTATTCTTTATCCCG 19287 36 86.1 30 .......A....C.C...........TC........ GCATACTAAAATCAATATGTTACGTTATAC 19221 36 80.6 0 .......A..A...........A..AA.......CT | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 98.8 30 GTTTCAGGAGGATGTTAAAGAAGTAGGTTCAATATC # Left flank : CGGAACTTTAGTTGCTCAAAAATACCTATCAAAGGTTGAAAAGTTGTATGGTGATTCGTTAGTTGACGAAAATCGTAATAAAATTCATGATCAGATGAATGAACTTTTTAATACGGTTTCTGAACAATTGTTTATGCTAGATCTACCTATCAGCATTGATTACGATTTTGAAATCAAACGGCTTTTAAAATTTTGTAATATTCGTTTTGATCCGGTATTGACAAATAATCCCTATGGTATAATTGAGTCGATTCTAAAGATTCATGAAGAATGTGATATTAAATCTTGCGTAGTGTTAACGAATGTAGCTCATTATTTAACGCCATCGCAGTATTTAGATTTAATTAAACTAGTTAAACAAACTAATCAATCATTAGTTTTAATTGAATTCACAGAAATAGGATGTCAGGAGTTCTATAAAAACAGTGAATTTTACTATGTTGACGCCGATTTCGTTGACTGGCATCTGTAACCGATTATATTTTCATTAGAAATAAACG # Right flank : AATGACGGAGTAGCTACCGTTTTGCTTTAAAATAATTAAAAGTAGGATTGTACCCTAAACAACGTTACCGAATAAGTATGAAAATCAACGTCTTTTGGTATATAGTCCTGTAAATAAAAAGGCCCTCACCAAGGTCTATCTCAGAAGTTAATTTTTCACTTTAACTTTTGCGGTAGACCTCCGTGGGGGTCTTTATTTGATTGCATTTAATATCCAGTCAACCCTTGTGTTTGGGTTCCTTGTGTTGGGGTAGTTTGTTGTGGTGCCGTGTAACCGCCACCGCCAGTACCGGTAGTGGTATTAGTACCAGTGGAAGATCCATACTGGTTAGCGGTGCCCGATGATGATTCTGAACCATTTGTGGTGGCATCATCGTCAACTTCACCTGTAACTAAACTACTTAGGCCGGTTGTTCCGGTCGTTTTTTTGCTGAGTTCCAAAGCGCTTCTGATAAAGTTCGTAACACGTTGACGCTCGGATTTAGGAACAACTTCGTAGGC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGGAGGATGTTAAAGAAGTAGGTTCAATATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //