Array 1 14244-7603 **** Predicted by CRISPRDetect 2.4 *** >NZ_PSQF01000044.1 Subdoligranulum sp. APC924/74 NODE_44_length_24320_cov_1041.71, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 14243 33 100.0 34 ................................. CAGAGCAACAGAAACGGACAAAACATCAAGCGCA 14176 33 100.0 33 ................................. TGAAATTACACTGCAAACGGTGCTTCTTGTATC 14110 33 100.0 34 ................................. GGATTGGGCTTCCGTTATTACTGCGATGACTTCG 14043 33 100.0 35 ................................. ATTACGATAACTACAATTTGCACTGCGTCGAAGAG 13975 33 100.0 34 ................................. ATCAAAGACGATGTATCATAAAGCATAAGAAAGA 13908 33 100.0 34 ................................. ATGTTGTGCTTGTCGTTCCGGCTGGTTGCTGGCT 13841 33 100.0 35 ................................. AGGCAGCGCAATTAGTGGAAGCCGATACAGGCGAA 13773 33 100.0 34 ................................. TCTTTTGGTCTATCTTGCATTGATTAGATATCTT 13706 33 100.0 33 ................................. ACGCTGCATGCAATGTTTTTTGTCTTTTTTTTC 13640 33 100.0 33 ................................. GACGTACGTTACGCGGCTTCCCCGCGCCCAAGT 13574 33 100.0 33 ................................. CCACACCAAAACCGGGAAAAGTCAAAGTAGTTG 13508 33 100.0 33 ................................. ATAATAAGAGTATGCTACTACACTTATTATAAA 13442 33 100.0 35 ................................. GGCAGAATTATGAATGTTTTGAATGGATTAAAGCT 13374 33 100.0 34 ................................. GGCAGAATTATGAATGTTTTGAATGGATTAAAGC 13307 33 100.0 35 ................................. CGGCGCTAAAGCTGACAGCGTGTCACAATGGTCAG 13239 33 100.0 34 ................................. AATCATGCCGCCGGTTGACACATCATCAGTCAAA 13172 33 100.0 36 ................................. TTTCTGGCTCCGCCGACTATGTGGAGTACAACTACA 13103 33 100.0 33 ................................. TGATTTTTCCGGGTCGGCTTGGGTACCTGAGTT 13037 33 100.0 33 ................................. TCGGTCGCTTTTGTCTTCGGTTTTGGGGCTAAG 12971 33 100.0 35 ................................. AGCAAAATCAACACCAGAGGAAGAAAAAAGGTGAA 12903 33 100.0 34 ................................. GTTTTTCCCCACGTGTGTATACCTCCCTTAATCC 12836 33 100.0 34 ................................. TAGCACACGGAGCCATCCGGGAAGGCCCAAACGC 12769 33 100.0 34 ................................. CTGATCACTCTTGGTGGCTCCGTTGCTGGAAACT 12702 33 100.0 34 ................................. CATGCTCTCCTCCAGCGGGATGATATGGTGCGCC 12635 33 100.0 35 ................................. ACCCTCATACCCACGTTGAGCAGCCATGCACATCC 12567 33 100.0 35 ................................. TTGGCGGTGCGTCCCGGTGTTGATCCGGGCGGCAT 12499 33 100.0 34 ................................. CGAAGCACCCACAATACAAGCTGATAAGCATGCT 12432 33 100.0 35 ................................. ATTACTTTGCCCGTTTTTATACCTTGTCGGATCCG 12364 33 100.0 34 ................................. CTCTGGTGGGGCGTTCGCAAGGCCGTTGGCTCTC 12297 33 100.0 35 ................................. ATCGCGGACTGCCAGTTGCCAGCAACGGAGCCACC 12229 33 100.0 34 ................................. TCATTTAATCCCCAGCAAAGGCACCTTCCGAAGC 12162 33 100.0 35 ................................. CCTCCCATTGAATAATGTCACGAACAGGGGGCCAA 12094 33 100.0 33 ................................. CAAAGAGCTGTCCATTTTGTCACGCTATCAGCT 12028 33 100.0 35 ................................. CAAGTATGCATTGTAACTGGCTGATTGCTCCAACA 11960 33 100.0 36 ................................. GATGTTATCCGCCCGGCTATTGATGTATTTTTGGCC 11891 33 100.0 36 ................................. CAGAGAATTGCAAAACCTTTTCGCGAACAATTTAAA 11822 33 100.0 34 ................................. TATAAAGAAAGGCCGGGCCAGAAGGCCCGGCCAA 11755 33 100.0 35 ................................. GCATGGGCACAGAATCCGGCGAGCGTGTATACATC 11687 33 100.0 36 ................................. CTCTTGAATAGTGTCAAAAATGCCCATGATAAATAC 11618 33 100.0 34 ................................. TGCACTGATGTCCAGATCGTTGGCCTGGGCCAGC 11551 33 100.0 34 ................................. CACAAGGTTCTGGGCGGTCGATCCGCGCACGGCC 11484 33 100.0 35 ................................. GTTGCGCAGGATGTCGTACAGGCTGTTTTTGCCGA 11416 33 100.0 34 ................................. TTTTTGCTGTCCGCGAAAACATGGCGGACGAAGA 11349 33 100.0 34 ................................. TGGCCAGCGAGGTTTTGCTCTTACCCTGACCTAC 11282 33 100.0 34 ................................. GCTTATCACGTCGCTACTGGTTCAAGCAGCTGTA 11215 33 100.0 34 ................................. CTGGTTTTCCGTCACGCACACCCACTTGATTGGG 11148 33 100.0 35 ................................. AATGGCTGCGGCGATCCCCGCCCGGCTGTGCCCAT 11080 33 100.0 33 ................................. TTTCGTCCTTTTGGCTCCCTTTTGGCGTCAGTC 11014 33 100.0 35 ................................. TTGTGCCGCTGCGCTGCCCCGTGCTATAATTGCCC 10946 33 100.0 34 ................................. AGCCTCCCACGGCTGCGGCACCCCCCATCGTTCC 10879 33 100.0 36 ................................. GGCTTAAAGAAATGGGAAATATTACGGAGATCATGT 10810 33 100.0 32 ................................. ATTCACGCGCAAAACTTTTGCGTATGTGTCAT 10745 33 100.0 34 ................................. CCCTGCCCTGGCCGTGAAAGAATGGGACGACGGC 10678 33 100.0 35 ................................. TTTTTGCTGTCCGCGAAAACATGGCGGACGAAGAA 10610 33 100.0 36 ................................. TGTGTCGGATTCTCTTCCGGCGCTAAAGCTGATAGC 10541 33 100.0 33 ................................. TTGGCTTGGCATTGCATAAGAGAAGAAGTATCA 10475 33 100.0 34 ................................. TACTGTTGATGAGGTGCAGGCCGATGAAGGACAG 10408 33 100.0 36 ................................. ACTACTTTGCCCGTCTTTTATGCCTTCTCAAAAATT 10339 33 100.0 34 ................................. ATCAAAGAGGATGTATCATAAAGCATAAGAGAGA 10272 33 100.0 35 ................................. TTTTGCGATTTTTAAGCCGCAAATATTGACGTGAG 10204 33 100.0 34 ................................. TAAGAACGAAGCCGCCGCCGCCACAGGCGGGGCA 10137 33 100.0 34 ................................. TAAGAACGAAGCCGCCGCCGCCACAGGCGGGGCA 10070 33 100.0 34 ................................. TAAGAACGAAGCCGCCGCCGCCACAGGCGGGGCA 10003 33 100.0 34 ................................. TAAGAACGAAGCCGCCGCCGCCACAGGCGGGGCA 9936 33 100.0 33 ................................. AGCTGGGCAGCCCGCGCACGGGTTGCCCAGTAT 9870 33 100.0 34 ................................. CCTTAAGATGTATGGGCAGCTGCACCAAGTCGTG 9803 33 100.0 36 ................................. ATACCTTAGTAACAACTCACGTCAATATTTGCGGCT 9734 33 100.0 34 ................................. AAGGATATGAGCCGCGCAGATGCTGTTGCTATCT 9667 33 100.0 35 ................................. AGGTCATTTCCGCGGCGGAACACTTTGACGCCACT 9599 33 100.0 35 ................................. AGCCAAAGAGGGTGCGGAAGTCGCAAAACAGGCGG 9531 33 100.0 35 ................................. GCTACAATACAGCTCTGCCGCAATGTCGGCGTTGT 9463 33 100.0 35 ................................. AGCCGGGCAGCCCGCGCACGGGTTGCCCAGGATGG 9395 33 100.0 36 ................................. TGGGCGCAAAATAGTGCGTGAGTTGTTACTAAGGTA 9326 33 100.0 36 ................................. CTTATACACCGCGCCGCGCGTGCGATGCTTGCGGGC 9257 33 100.0 33 ................................. GGGCCTTTGGCCCTCAGCGGCCCTCGCGCGCAC 9191 33 100.0 34 ................................. GGGCCTTTGGCCCTCAGCGGCCCTCGCGCGCACT 9124 33 100.0 34 ................................. CATCTGGATGACGTGGACGGCGGCGACTTAGTGC 9057 33 100.0 35 ................................. AACGGCGTGGTTGCGCTCCACATGTTAGTATAGCA 8989 33 100.0 35 ................................. GCGGCCTGGACTGGCTGTCTGCGTGAGATGCACCA 8921 33 100.0 36 ................................. GTCAGGCTGATCGTACCGGAACTCACCGTGATGTTG 8852 33 100.0 33 ................................. CCATGTGGTTTATGTGATTTGTTGACAACAACC 8786 33 100.0 35 ................................. TCCCGCCCGCCGGGCATGGCGGTCTATTGCCGCCC 8718 33 97.0 35 ..................G.............. TACCTGGATTTGGTCAGCGGCGAATTGCGGATTAA 8650 33 97.0 37 ..................G.............. CACCGCACCCGTGTTTGCGTGGTGGCCGGGCGGCCTG 8580 33 97.0 35 ..................G.............. CGCAGGCCGTCCGTGTCAATGCTGCCCTGCGCAAT 8512 33 97.0 36 ..................G.............. ACCGTCTGCCAATGGAAATACCGATTGGAGTTTGCG 8443 33 97.0 33 ..................G.............. AATGAGTTTCAGCTCCGCACACTGACGCATAAT 8377 33 100.0 33 ................................. GCGTATCCATTGAGGCCCGCCTGGCGCATGATT 8311 33 100.0 35 ................................. CTGTAATGACATCAAAAATCGTCTTAAAGAAACTT 8243 33 100.0 35 ................................. TGCCGCGTCAGGCTGTGCCCCATCTGCCAATGGCG 8175 33 100.0 35 ................................. GTGTGGCGGGGGCTGGGGCAGCGCCCCAGATTGGC 8107 33 97.0 33 ..................G.............. TCAAAGATGTATCTTTTGATGAGATGCAAGATC 8041 33 100.0 35 ................................. CAGCGGACTGCCGGTTGCTTACCGGTCGTGGCCGG 7973 33 100.0 34 ................................. TGAAAGCACGGTATATTGAGGATCGCACTAACCG 7906 33 100.0 35 ................................. TATCAGAGGGGAGATGTTTGAATATGCAAAGAAAC 7838 33 100.0 34 ................................. GGCTTTTGCGCGGTCTGTGTGGGCTGTTTCTGGC 7771 33 100.0 35 ................................. GGCTCGGCAAACAGTATCTAGGCCAGAAAGATCAA 7703 33 100.0 35 ................................. TCGGCGTAGGGGGTGAAACCGTCGGCCAAGGTACT 7635 33 97.0 0 ...................T............. | ========== ====== ====== ====== ================================= ===================================== ================== 99 33 99.8 34 GTCGCTCTCCGCAAGGAGAGCGTGGATAGAAAT # Left flank : GAAGTGTACCCACCGTTTTTCTGGAAGTGAGGTGCCGTTATGTTGGTGCTTGTAACCTATGATGTCAACACCGAAACAGCCGCCGGTCGTCGCAGGCTGCGCAAAGTAGCAAAAGTCTGTGTAGACTACGGCCAGCGGGTGCAAAACTCCGTATTTGAGTGCCTGCTGGATGCCGCGCAATACACGATGTTCAAAGCAAAATTGACCGAACTGATCGATTCGGAATCGGACAGCCTGCGCTTTTATCAACTGGGAAACCATTACAAAAGCAAAGTCGAGCATGTGGGTCTGCACCCGGATTTTGATCAGGATGGAATCTTGTTTGCTTAGTGCGAGGGGAAGGCAATCATAAAACTCCCGGTTCCTTCGCACCAGAAAATATGGAAAAAACAGGGGCAGAAAGGGTAAAATACAGCCTTGCCTGTCAGCATGAAGATGCAATCTCCATAAAATGTGTTTCATATGCGCAAAAGTGCCCCACTGTTTTGTGCACTTTTGCT # Right flank : TGGGAAATGGATACTGTAATAGGCAAAAGCGCCGGTGTCGCTCTCCGCAAGGAGAGCATAAAATGTTTCTCTTTCTGACTGTTCAGGGCGGTTTTGTTCATGCGGATATCCGCTTTAATTTTAAAAATTGCTATAGTAAAAAGCTCTCGCATAAAATAATATAAAAATATTATATTATCTACTTGACAAGGTACCCCGGCGGGGTATATAGTGAATATACCCCGCCGGGGTACCTTGCATGTGATGGGAGGGTAACATAATGCAGGAAAACGAAAAGAAGGAACCGTGTTGCTGCTGTGCACACAAAACAAAGCATCGCAGTGAAGAAGAGTATAAAAGCCTGGTCCACAGACTGAACCGGATCGAAGGGCAGATTCGGGGCATCCGTGGGATGGTGGAAAACGAAGTGTATTGTCCGGATATTCTGGTGCAGTCGGCGGCGGTAACGGCGGCGATGAACGCGTTCAACCGTGAGCTGCTGGCAAACCATATCCGCACCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCGCAAGGAGAGCGTGGATAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCGAGGAGAGCGTGGATAGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.20,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //