Array 1 298561-300584 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851034.1 [Clostridium] clostridioforme 90A6 acBSb-supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 298561 32 100.0 34 ................................ TTACATACAGGGCAAAATACTGGAAGGTTTTTCG 298627 32 100.0 32 ................................ TCCGCCTGACGGTATCTTCACCTTGTCAAACG 298691 32 100.0 34 ................................ ATCAATCAACGAGTTTCACCTCCGCCCCGTCCAG 298757 32 100.0 34 ................................ AACAGATATGAAAGAGGACTTCGTGGAACCTCTC 298823 32 100.0 34 ................................ TTCAAAATCGCCAGTCCATTTACCCCTATGGAAA 298889 32 100.0 33 ................................ TCCGCCTCTGCTATAAAACCTATCTTGTCAGGT 298954 32 100.0 34 ................................ ATACGGTATCTCTCCGCTCTCGCACATCTCATGG 299020 32 100.0 36 ................................ CACCTGGGCCGGGGCCATGGATGCAAGGTCCAGGAG 299088 32 100.0 34 ................................ CGTCAAGTATGTCGGATGTGGGAAAACAGGCTAT 299154 32 100.0 35 ................................ CCCCAGGCGGGTACCGCAATGGTATCCAGTCATGA 299221 32 100.0 34 ................................ ACCCGAGATGTCCAGAAGGTTACTTTCCAGCCTT 299287 32 100.0 35 ................................ ACAAACCTTAAGGTCACTGCTTACAACGCTTATGC 299354 32 100.0 36 ................................ ATATCTTTCCCTTTCCGCCCTTCCGGGCAATAAAAT 299422 32 100.0 35 ................................ AAGCGAGTGAATTAAGAACAGTAAAAGTGCGCAGA 299489 32 100.0 34 ................................ ACAAAGATGACCACGCGCCTGCGGGATGGTGGAT 299555 32 100.0 36 ................................ TACCTCTAACATCATAAAGGTAAGGGTGCCCAAACA 299623 32 100.0 34 ................................ AAAGTAGTAGTAGACTTAGCATGTCCCAGGATAC 299689 32 100.0 33 ................................ CCTACAAGGAGCGCATTATATACTCTTGCTTGA 299754 32 100.0 34 ................................ TGTACTGAATAAGAGTAATACCCCCGCTTGCCAC 299820 32 100.0 34 ................................ CTCGAACCGAAACGCCTTTAATGTCGCCGTCCCC 299886 32 100.0 35 ................................ TCCACAATCTTGACAATAGTCTTGCCCCATCTCAA 299953 32 100.0 33 ................................ TTGTGCAGTATTTCAATGCGGTGTTTCTGGTAA 300018 32 100.0 35 ................................ GCTATTATCTTTTTTACCTCACTTTCGCTGATTTC 300085 32 100.0 37 ................................ CCTTCCTGGCCGTCCTGCCCTTCCTTGCCTGCCTGCT 300154 32 100.0 35 ................................ ATCATGCCGTTCGTGATTCCCACGCCCGCCGCCGT 300221 32 100.0 34 ................................ CCTCACGTGCCCGTCCCCGGCCGTCTGGTACTGC 300287 32 100.0 34 ................................ ATCCATTAACTGAGCCGCAAGCTCACCCGTCTGC 300353 32 100.0 34 ................................ AGACCAGCAGACGGCCGATTTTATCAATTGTGTC 300419 32 100.0 36 ................................ ATGGACATGTACCGGCTGGCCGTTGACTGGCTTATG 300487 32 100.0 34 ................................ CGCAATCCGCAGTGCACCTCTGGCATCCGTAATC 300553 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 31 32 100.0 34 GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Left flank : TGCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGAGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGTGGGATATGATTTGTTTGTGGAAATGTGTTGAAGAATAGTAGTGGTTATTGTGTAGTATTGCT # Right flank : TTCCGGGGTAGTCTCATAGCCGTTCACATAATAGCGTCTCCGCTCTCGCGTCGGAGCAAGTTAAAAATCCGCCAATTACAGAATTACATCCAGTTGCCCACTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCAAGCCCCATCCCTTCCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCTCCGCCGATTCCGATGGGTTTGCCGTCTGCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCTGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 19668-21116 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851043.1 [Clostridium] clostridioforme 90A6 acBSb-supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 19668 33 100.0 34 ................................. AACAAGGCCCTGGCGGAAACGCCAACGACCTACC 19735 33 100.0 35 ................................. GGACCAGCGCATCCATCTCAGGGTATCCTCTCCTC 19803 33 100.0 33 ................................. CCCCTCCATGGTCAGGGCTTCCAGGCGGATGTC 19869 33 100.0 34 ................................. TGGAGAAACAGTCGGAGTATATCTCCTGCGAGGG 19936 33 100.0 34 ................................. CTACAGGAACGCAGGAGCCGGCCATCCAGGAGGG 20003 33 100.0 34 ................................. ACTGCAACACTATCACAATGCCAAACTCCGACCA 20070 33 100.0 34 ................................. CGTATACTCAGACGGTCAGTGTACCGGGAGCAAA 20137 33 100.0 35 ................................. TGCAAAGGATGGAAAAATGCAAGAGGTTGCCGGAT 20205 33 100.0 33 ................................. CTAAAAATAGGTATAAAAAATACAGCTCCGCAA 20271 33 100.0 34 ................................. ACACTCATGTCGAAAATCAACATCCTGATAGTCT 20338 33 100.0 35 ................................. TGTGTTAGAAGATGCGAAAGTCTATGTTGGTTGGG 20406 33 100.0 35 ................................. TGTCCGGTAGACTTATATATATACTGCATGGGACT 20474 33 100.0 37 ................................. AAAGTTGGCCTGTATCTCAATCATAAATCGCTCCTGG 20544 33 100.0 34 ................................. TCCGTGATATTCGCAACCTCACTGGAATCCGGGG 20611 33 100.0 34 ................................. CTCGCTCCCAGGCTTAGCCTCGTAGCTGTACACC 20678 33 100.0 34 ................................. ATAGCCTGTGCCACCTTCCACCAGGGAAGGCCGT 20745 33 100.0 35 ................................. ACAATATGCAAACAAGGTAACGTTTTTTGATACCC 20813 33 100.0 35 ................................. CTGTTCTCATGGTTCTTTCCTTTCCGATTCTTGTT 20881 33 100.0 36 ................................. TGCCAAACTGACCAATTACCGGATTGAGCAGCTAGA 20950 33 100.0 34 ................................. TTTTTTAGTCCCTGGTGAGGAGCCCGGCTGGAAA 21017 33 100.0 34 ................................. ATCCCTCATTGCCTGGAACGCGTCTCTCGCCGTA 21084 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 22 33 100.0 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : CCTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTATTGCGCATTTACGATGTCAATGATAAGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGTCCGGGAGATTCGCACCTGAAAAACAGAGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGGGGGGGGGCATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : TATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCCGATTTCGTGATAGGCCTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTAACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGCAATTACCTAATGCAGAACCATTTCTGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //