Array 1 93875-90405 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLKC01000002.1 Sporomusa sp. KB1 SalpaDRAFT_Scaffold1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 93874 32 100.0 32 ................................ CCGCCAATCGGCAAACATAATTGATTATTTTA 93810 32 100.0 34 ................................ AACTCAATAGCGTTATTTCTCTTTGGTAGCTCAG 93744 32 100.0 32 ................................ ACTAGCTACATTTGGGGCAAACGCGGGACCAG 93680 32 100.0 33 ................................ TCGTGGAACTTCGAGGAAATAAAAACTGCACTC 93615 32 100.0 34 ................................ TCTTGCAATGACTGATTATATTATTCAGCACCAT 93549 32 100.0 33 ................................ TAGCTCCCAGCACAGGGCATGGACGGAAGCAAC 93484 32 100.0 34 ................................ TTCTGCGCTTAACCCCATAGACTGTGCCGCTTTA 93418 32 100.0 32 ................................ CCGAATTCGGTTGAGAAGTATATGTCGCCGTT 93354 32 100.0 32 ................................ TGTAAAATCAACCCTTATACTGGGATCATCAA 93290 32 100.0 33 ................................ TTTATTCAATGCCATGTCAGTAAGATTAACCTC 93225 32 100.0 34 ................................ ATAATAAATACCGCCCCATTGCCGGAGCAATTGG 93159 32 100.0 32 ................................ ATCTATGACCGGAATAACTCTTACTAATGTAG 93095 32 100.0 33 ................................ TGTAAAATCAACCCTTATACTGGGATCATCAAA 93030 32 100.0 32 ................................ ATTTATGCAGTCCCTCCAATCTATCTAGCAAA 92966 32 100.0 34 ................................ TCTCCAGGCATAACATCGGAGCCAAAAAACAGCA 92900 32 100.0 32 ................................ AGTGTTTAGGCGAATTACGCAGACGATTTGAC 92836 32 100.0 33 ................................ AACTAAATGAGCCACGGATGATTTTACCCTAAC 92771 32 100.0 34 ................................ CCGGTTCAAGCCGACATAATGAAGCGCGGTTTAC 92705 32 100.0 32 ................................ TTTTTCTTGGTTCCCTCCAGGGACCATTCGCG 92641 32 100.0 33 ................................ TGCCAATACCCCGGCTAGGGGTCTAAACATAGT 92576 32 100.0 33 ................................ GCCTAAACACTGAACAACTTGCTGGCCGTACAC 92511 32 100.0 33 ................................ CTCTGCCGCCATAATCACTATATCTCTTGTTGT 92446 32 100.0 33 ................................ AAATTATTTCTCAAATCCTGGGACGATTTTCAA 92381 32 100.0 34 ................................ ACCAGCAGGGGGCAAACGATGGCTGACCAATTAG 92315 32 100.0 33 ................................ GTTTTCGCAAGTTCGACACGCACAGTCAATCAC 92250 32 100.0 32 ................................ CAGCAAGCCTCCACGCCCTGACCACTCATGAG 92186 32 100.0 33 ................................ TTTTATGTTTACCGTTAGAATCAAATCCAACAT 92121 32 100.0 33 ................................ GCTCTTTGTTTCCCGCTCTGTCTTTGCCTTATA 92056 32 100.0 33 ................................ TTATCAGCAATATAGTAACTGTTTAGTACCCTG 91991 32 100.0 33 ................................ ATTCATGAGCGAGTGACACTCTTCAACAGTCAG 91926 32 100.0 33 ................................ TCACCCCTGCGCGCCCATTGCTTGTAGCTCCAT 91861 32 100.0 35 ................................ ATCACAAATAGTAATTCCTCTGCCGCCATAATCAC 91794 32 100.0 32 ................................ TCATTACGCCCTCCTCGTATAGCCGCTGAATT 91730 32 100.0 32 ................................ AGATGCAGAATTGCTGTACAGAGAGGACTGAT 91666 32 100.0 34 ................................ CTCAGCAGCGCCTCCAGTATTGCCCGAAATCCCG 91600 32 100.0 34 ................................ ACTCCTTCCAATAATTGATCTGTAGTTTATCCCC 91534 32 100.0 32 ................................ AGACTCGTCGGCATCAGCAGTACTGATTAAAT 91470 32 100.0 33 ................................ TTGCAGTAGGGTACGATGCACTAGTGGCTAAGT 91405 32 100.0 32 ................................ ATAAAAAAGTAATGTTGTTTAATGGGCAATTA 91341 32 100.0 33 ................................ TTTATTCAATGCCATGTCAGTAAGATTAACCTC 91276 32 100.0 33 ................................ AAAAAACGGATCATTCTTCACAAACTTTAAGAA 91211 32 100.0 32 ................................ TTGGACACCCACGGCCCCACTGCCGCTCTTTC 91147 32 100.0 33 ................................ CAAAATCTTGCTTACATCAGTCTTTTGGTTAAT 91082 32 100.0 32 ................................ TTTGCCGTCTACCGCAAGGCCAACTGGTGCGC 91018 32 100.0 33 ................................ TTGAGCAATAGCCGTGTATTTCTTAGTCGCCAA 90953 32 100.0 33 ................................ TTTTATTGGAACTTGGGAAAACAATGGATTTAG 90888 32 100.0 33 ................................ ATCTATCGCCGTAACCTAGTCCGCCATAACTAA 90823 32 100.0 32 ................................ CTAAACCATTTGAGCCTGGCATAATTTTTGGT 90759 32 100.0 32 ................................ GTTGAGCCCGTAATTGGTATACTTGAACAGCC 90695 32 100.0 33 ................................ TGGACAGGCAATTGTAGCTGAGACTGCCGCTTA 90630 32 100.0 32 ................................ AGGCTGCAATGAATGAAGAAATATTGAAAATG 90566 32 100.0 32 ................................ ATGTCGGAATTTGGATATATTCCCGATGATTT 90502 32 93.8 34 ..........................C....T ATAATAAAATGTACAGCCGTGTATGGTTGCATAT 90436 32 87.5 0 .............T........A..C.A.... | ========== ====== ====== ====== ================================ =================================== ================== 54 32 99.7 33 GTCGCGCTCCTTGCGGGCGCGTGGATTGAAAC # Left flank : CAACATTGAAAAAGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACTGTGTTACTGGTCGTCGTAGGCCGAGGGATGAAGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACACTAATTCTCGGAAGCCGCAAACCGGAAGCTAAGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACCGATATTCCATAGTACCGTAGTAATCTTCCGGCGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACTTCATCCTGCCAAATTTCAGTTTCCTTATCTTGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACAATCAGTTATCGGAGGCAATAAATGATACACGAGTCGCGCTCCTTGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGTGGATTGAAACAAATTGACTGAATATCGGATAACTACCATCAAC # Right flank : AGAGGTATGACCAATAGCAGCAATATCGTGGAAGAAATTGCTCAGGCTTCCAGGTCTTACTGGGGGATTGAAAATAACTTGCAATGGGCGTTAGATGTTGGCTTTTGCGAAGATCAATAGCTGACACGACTGCAGGTTGAAGCAGCAAACCTGTCGCAATTACGAAGGTTGTCTGCCAATTTATTAAAACTGGAAACAGAATCAAAGATGTCCATTCAAAGAAAACGCTATCATTGTTCTTTGGATATGGATTATATGGAATCCGTTGTTTTTAATCCTCAGCTTTTTTCATGAACATGTCCTGATAATTTTACGAGTTTGTTTGACTCAAGTTGGACATCATGGTATAATCTTACATGGTAAATTGATACATGAGTGTGATTATAAATTGAAAAATTCTTAGATTAGGCAAAGACGCCGTGAAAGTTCGAATAGTAGAGATGCGAATACACGGTGTTTTTATTTTGATGAGGAATGACCTGTTGATCCTGATACGATAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCTTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 95467-94071 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLKC01000002.1 Sporomusa sp. KB1 SalpaDRAFT_Scaffold1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 95466 32 100.0 33 ................................ CAACATATGAAGCATCAACCTCACTGCCGGGAC 95401 32 100.0 33 ................................ ATACATACTAGGTGAAAAAGAATATGGGTTTAT 95336 32 100.0 32 ................................ ACTATTACCGCCAGTAGATCCACCACCAGAAC 95272 32 100.0 33 ................................ TTCTTTCTCTCCGAAACATTCAAACGGAATTTT 95207 32 100.0 32 ................................ TTGTGCCACTGACATTGCATTTGTTGCCGTGG 95143 32 100.0 34 ................................ ATGTTTAGTGGCGTAAATTCTCCAGCAAGGTCAG 95077 32 100.0 33 ................................ TCCTTGGCGAAAGATTCCATTAGCGTTAAGTAT 95012 32 100.0 33 ................................ TCGGTTAGATCCCCACATTAAAATACTGTCTGA 94947 32 100.0 33 ................................ ACAACGTTACAAGTGTACCGGCAACGGCTGGAC 94882 32 100.0 34 ................................ AGAAAGCTGCTGGAAAGAAAGATAGGACCGGAAG 94816 32 100.0 34 ................................ TTTTTCTTAGGACACCATTCAGGGCGACAATCAA 94750 32 100.0 33 ................................ ACAAATACTAGCATTTTATCGACATTATTTTTA 94685 32 100.0 33 ................................ TCCCAAAACGCGTTTGGGTTAAACTTTAAATCC 94620 32 100.0 33 ................................ ATTCAGCAATCAATGCGTGCGATGCGCAAAAAC 94555 32 100.0 33 ................................ TAATAGCTGACTTATCCCATCTCTTGCCGTTGC 94490 32 100.0 32 ................................ CACTCAAGCAGTGTCCGAAATGTTACGGCGCT 94426 32 100.0 33 ................................ CTGTAAGAAAGTAGGTGAAACAACATTGAAAAA 94361 32 100.0 33 ................................ TGTGTTACTGGTCGTCGTAGGCCGAGGGATGAA 94296 32 100.0 33 ................................ ACTAATTCTCGGAAGCCGCAAACCGGAAGCTAA 94231 32 100.0 33 ................................ CGATATTCCATAGTACCGTAGTAATCTTCCGGC 94166 32 100.0 32 ................................ TTCATCCTGCCAAATTTCAGTTTCCTTATCTT 94102 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 22 32 100.0 33 GTCGCGCTCCTTGCGGGCGCGTGGATTGAAAC # Left flank : TATAGAAGATTATCCGCCATTTTTCTGGAAGTGAGGAGAAACAATGCTGGTTTTGATTACCTATGATGTAAGTGTCACTACTGATGCTGGTAAAAGGCGGCTCCGCCGGGTGGCGAAACAATGTGTAAACTATGGGCAACGGGTGCAAAATTCGGTTTTTGAATGTCTCGTTGATCCAACACAATTTGCCGAACTTAAGCATCGTTTGGAAGCGATTATTGATGTTGAGACAGATAGTCTGCGTTATTATTTCCTAGGAAGTAACTGGAAAAGTCGTATTGAGCATGTTGGTGCCAAGACGGCTTATGATCCGGAAGGCATCTTGATGATCTGATGCGAACCCTAAGTGAACATTATTTTTCCGGAATATTCGCAGTGCTGATGCTGTAAGGATTTTGAGCAATTTAGATAAGAAATTTACTAATTTTAAAGGCGATTTTATTTGGTTCGCACAAGTAGAGGCTGCAGAGCTTGATTTTAGTGGCTTTGTAAGACTTGCA # Right flank : AATCAGTTATCGGAGGCAATAAATGATACACGAGTCGCGCTCCTTGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGTGGATTGAAACAAATTGACTGAATATCGGATAACTACCATCAACGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACCCGCCAATCGGCAAACATAATTGATTATTTTAGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACAACTCAATAGCGTTATTTCTCTTTGGTAGCTCAGGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACACTAGCTACATTTGGGGCAAACGCGGGACCAGGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACTCGTGGAACTTCGAGGAAATAAAAACTGCACTCGTCGCGCTCCTTGCGGGCGCGTGGATTGAAACTCTTGCAATGACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCTTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 3393034-3397304 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLKC01000002.1 Sporomusa sp. KB1 SalpaDRAFT_Scaffold1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3393034 30 100.0 38 .............................. CTTGTTGGTGTCCAAAGCGACAGATAACCTTCGGTTAA 3393102 30 100.0 36 .............................. CTATTTTGTGTTTTTGGAAAGGACATTTCTATATGT 3393168 30 100.0 36 .............................. CAAAGAATCAACAATTTATAGAGATTTCGCAGACAG 3393234 30 100.0 36 .............................. TAAATCGTTTCAATAGCTTTTATTTGCATTAATATC 3393300 30 100.0 36 .............................. ATTTTATTCCGCTTCCTTTGCATCGGTGTTCGAATG 3393366 30 100.0 35 .............................. TTTCCACCCACAGTGGTATAGTAGGCAATAAAAAG 3393431 30 100.0 36 .............................. TGTATTAATAGACAACGGGCAATCTTGTTGCGAATC 3393497 30 100.0 36 .............................. AATTACCCTCCCATAAATCCCCAGTTCTCCGGTCTG 3393563 30 100.0 36 .............................. TGGATAAGGAGCGACAACCATGAAAAACGTTGAAAT 3393629 30 100.0 36 .............................. CGGTTAAAGGCCCTCGTCATGGCAGTAAAGACCAAC 3393695 30 100.0 36 .............................. TAAGTTCGCCTGCTATAACACGAATCCATAGCTTTT 3393761 30 100.0 38 .............................. AAAATAAATACTATGCTTGACGATGAGAAACAAGCTGC 3393829 30 100.0 37 .............................. TCGGAGGCAATAAATGATACACGAAAACAATAAATTC 3393896 30 100.0 36 .............................. ACTTTTTATTTGCGTCACCTCGTAAGGCAAGATGAT 3393962 30 100.0 35 .............................. TGATACTATTGCTACAAATAGAGATAGTGTACAAA 3394027 30 100.0 36 .............................. ATGGCAATCGGTACTGAGTGGATGGCATACGAAACG 3394093 30 100.0 36 .............................. ATATTATTTGCAATCATATCAGCAGCGTGCAGGGCC 3394159 30 100.0 35 .............................. TGGAACTTCAAGGGCGGCGGCGATTAAAACCGGGC 3394224 30 100.0 35 .............................. GCGTTCTGCCCGCCTTGATGAGCGGGTGTTGGCGC 3394289 30 100.0 37 .............................. TCAGGTTCACTACGCCCAATACCGACACTAGGATCAG 3394356 30 100.0 35 .............................. ATAAACCAGAACGCCGGACCACCTTTAAACCCGAT 3394421 30 100.0 37 .............................. CTGTTCATTGCATGCCACCCGCTACCACCCCTATTGT 3394488 30 100.0 35 .............................. TTGTTTGGCTTAATACTGCCAGCACGTCATTATTA 3394553 30 100.0 35 .............................. TTCCTCCTCAAAAGTTTCTTTTAAAATAGCTTTGC 3394618 30 100.0 36 .............................. TTAGGAACTAAATACCGGTATAGATCCATCGGAGTT 3394684 30 100.0 36 .............................. TGATATACTTGATACGTATATAGGAGAATGATTAAA 3394750 30 100.0 37 .............................. TTATCATTGGAATGGCAACGCATGGCGAAAAGTGCAT 3394817 30 100.0 36 .............................. TAAAAAATAGTTTCGGACATGCCAAAAAGACAGGAT 3394883 30 100.0 37 .............................. CTGATTTATCGACAAATACCAAGTACAAGGTATTGAA 3394950 30 100.0 38 .............................. AAGATAAGAGAATTATGGCTGGCTTGCGATAGTAAGAA 3395018 30 100.0 36 .............................. AGAGGTGGTTGTATGTTAGGAGAAAACCTTAAATAC 3395084 30 100.0 36 .............................. GGAATAATTTCAGTTTGATTCGCAAAATAAGTATAT 3395150 30 100.0 36 .............................. GGATCTTTGGCTACAAAGTGGTCAAGCATACGCTCT 3395216 30 100.0 38 .............................. TGGCTTTCATCCAGCAGCACCTCCCCGCTCCTTGTCCC 3395284 30 100.0 36 .............................. TTTTAAATTTAATCCCAACCTTGACAGCCACAATAA 3395350 30 100.0 36 .............................. TGGGTTCCCGCAATACGAGCAGGAAATTACAGCAAA 3395416 30 100.0 36 .............................. TTGTCTATTGCCGATGCTCACAAGGTCGAAAAAGCC 3395482 30 100.0 36 .............................. TGTTTTAACCCAAACTGATGCACCAGCATGCTTAGT 3395548 30 100.0 36 .............................. GTAATACTATCAAGGTAAGCAGAATAGATTGATTTG 3395614 30 100.0 38 .............................. TAATTCGCAGACGCAGTAGCCGCCGCGTAAAACCCGGC 3395682 30 100.0 36 .............................. TTGTTGACGAATACAATAGTAAATTGGCGGCTACGC 3395748 30 100.0 35 .............................. ATGATGTAAGCTCACAAGCGAATGGTTTTTCATCT 3395813 30 100.0 37 .............................. TCGAATCAACTAACGACAAACGGTCAAAAGAAAAGTG 3395880 30 100.0 37 .............................. GCGATTACGGTAGTTATGCTGCTGGATTTAATAATAT 3395947 30 100.0 35 .............................. TATAAAAAAGGGATGAGTATTGCTTCGCTGGCTAC 3396012 30 100.0 38 .............................. AGAGTTACGATGATCCGAATATTCAGGGAAAAAACGAA 3396080 30 100.0 38 .............................. ATGATAATGCAAAGTATGAAGGCACGCAAGATTCAGAT 3396148 30 100.0 36 .............................. TTAGAAGTATTTGAACGGTGCGGATTAATACCGCAT 3396214 30 100.0 37 .............................. GAACTACAAAAGGCATGGCAAGCGAAGACGGATAAAC 3396281 30 100.0 37 .............................. ACATAATCCCTGGTAAACTCGGCAATTCCTTCGGCTC 3396348 30 100.0 36 .............................. TTGATTATATATCGTGAGCGTTCCGACCTTCGCGCA 3396414 30 100.0 36 .............................. TGGAAAATCTCAGGGATGCCGGGGTGCAAAGTCTTG 3396480 30 100.0 37 .............................. ATGATACATTTCACGTTATTCACCCCCTCTTCTGTCA 3396547 30 100.0 35 .............................. TATCCTGGGTCTACGCTGGTCACACATGCAAAACC 3396612 30 100.0 37 .............................. TTCCTATGTTGGGTGCATTGAAGGTGGAACACACTCT 3396679 30 100.0 37 .............................. CAGCATCATAGCCTCCCTCTACGCCTGTTGCTATTAG 3396746 30 100.0 36 .............................. CCTTTCCGCTTCGCGGTCCCCCACATTGCCTGCACC 3396812 30 96.7 38 ..........C................... CTGTTCCTGCGCTAGTTGCTGAACTCGTCAACACTAAC 3396880 30 100.0 36 .............................. TTGTCCAATCAAGGTCACTGTACCGCGATAAAACCC 3396946 30 100.0 37 .............................. GGTGATGGCGGCATTGATGAAGCCATCGTTCGCCTTA 3397013 30 96.7 36 .............................T TGACAAACATGGATTGGAACAACAAAAAAACGCCGT 3397079 30 96.7 35 ................C............. CACTTTGCCCTAGCTGCGTGGAAAAGGCGGCTAAA 3397144 30 96.7 36 ..........................A... ACCAGTTATAATGTGTTTGGTCTAGCCGTGCAGGAG 3397210 30 93.3 35 .................A........A... GCTCTAATCCTTCGCCTGCATTGCCTTCCGTTAGC 3397275 30 96.7 0 ..........................A... | ========== ====== ====== ====== ============================== ====================================== ================== 65 30 99.6 36 GTTATTAGCCTACCTATGAGGAATTGGAAC # Left flank : TTTATTGCAAATTGGTAAAAATATTTTGTTGAGTCGACAGAAGGTGAGAAATTGTTTATTATATTGGTATATGATGTAAATGAAAAGCGTGTAAACAAAGTTCTGAAAAAATGTCGCCAGTATTTGAACTGGGTGCAGAATTCCGTTCTTGAAGGTGAAATTTCTGATGCAAATTATAAAAAATTGACTATGGAATTAGAACGAATTATTAATAAGGAAGAAGACTCGGTAATTATTTATAATATGCGTACGACTCGCTATTATAAGCGGGAAATTCTCGGTATGGAGCGTTCGAGTATTAGCACCATCATCTGAGAGCTTCGTCGTCGATAATTGGTTTGGTAAAAAAATAGGGAGATCGACGACAAGATAAATTTTGATAAACGTAGATTTAATAAGGGGCTTGAGTAGGAGTAATATACGAGAAACACTATTTGATGAATTTGCTGCTAAATGTTGCTAGCCCTTGAGGTAATTGGATTTTATTGTTTTTAGAACGG # Right flank : CCTGATTTGATGCTGACTGAAGAAGCAAGGGGACGAACATTTTGCTTCCCTTTTAAAAACAAGGAGTTAGTTTTTAAAAGGGATGAATACTGTGAGTACAATCATCAAAATAAACACACGGCCATTATCACAAGATGCCATGTGTTTTTTGGTGGGAGAATTCGAAATGACAGTACCACCATCCCTGTGAAATATTACATGATAAAAAGCAGTATCCTATTGAACGTATCTGTAAACTTGGAATAGTGAATCGTGCTGCTTACCTGTTGCCAGATAAAGTAAAAAGCGGAAACTCAAAGTGTGAGGTTCCGCTTAAAAGTTTTTTATTATTTTGTGCGGTATGTCTCGTGAATAATAATATTTCCTAACAAATGGACATGTAGAATATGGGATGTTAGTAAACTGCTGTAAAACTCAAAATAAATTCTAAGATTTAAAGAATATACTATAAACATCAAAATAAAGATAATTATAGAAGGAGTGCATTGAATTATGAATAA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAGCCTACCTATGAGGAATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 4290573-4293697 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLKC01000002.1 Sporomusa sp. KB1 SalpaDRAFT_Scaffold1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 4290573 29 100.0 34 ............................. AGATACGCCGCCGACAACATTCGATACCTGCGTT 4290636 29 100.0 36 ............................. TATCTGAGCACCCATCGGGATAAACAGCGGTTAATC 4290701 29 100.0 35 ............................. TAGATTTTGTTATCGATCCGCTTGTAGGAATCTTT 4290765 29 100.0 36 ............................. AGATAGAAATCCTGTTTAATCTGTTCGCGTTTGTCC 4290830 29 100.0 36 ............................. GCGGGAACACCTGTTTTTTCTGATACTTGTTGAGCC 4290895 29 100.0 35 ............................. TATGTTTCGCAGGCGGCGTTTACTGCTGGAAATGG 4290959 29 100.0 36 ............................. AATTAGGCTCTGTTATGCTATGGAAACCACCGTTAT 4291024 29 100.0 36 ............................. CCGGTTACAGGCGGTCCCTGAGTAGGAGGCAATAAT 4291089 29 100.0 36 ............................. TCTGATTTGCTAGCCTGTTGTGTTACCGTTGTTGGC 4291154 29 100.0 37 ............................. AACGCCATGCTCCCTAAATACTACCACGAAGCCTCCC 4291220 29 100.0 35 ............................. TAGTATTGCGGTGGTCTGCGCTCCAAGCATATAGG 4291284 29 100.0 37 ............................. TTGGCCTGATCGGGATTAATACCCAACTCTTTGGCTG 4291350 29 100.0 35 ............................. ATTTTAACTGCTGCAATGCTTTCCAGTGCCTCCAC 4291414 29 100.0 35 ............................. TAGTGCTGGATCGATGTCCAACCATTAACACCTGC 4291478 29 100.0 36 ............................. TATGGCATGATTTTCTTTTTTCTTGCCACCTACTTC 4291543 29 100.0 34 ............................. CCTAATGCAGGCGAGAGCGTTAACTCGTGACTCT 4291606 29 100.0 35 ............................. TGATGTCTTCCCATGTGGATTCGTAAGACTGCCGC 4291670 29 100.0 35 ............................. ATCTACTCCCCACCATCCTCTGTATGAAGTCGGCA 4291734 29 100.0 36 ............................. TAAAAGCAAGTACCTTGCTGAGTAACTATAGTAATT 4291799 29 100.0 35 ............................. CCTTCAATCGCGAGTTTAAGCATGTCTCAGCCTCC 4291863 29 100.0 37 ............................. AGAGTAAATTCGTTTCTTGGCATCTACTTGCCCCTCC 4291929 29 100.0 35 ............................. TAGGACGATAACAACCCTTGAGAAACGCCAGATAC 4291993 29 100.0 36 ............................. TTGATCAATTAAAATAGCCAAGGAGGACACGTTATG 4292058 29 100.0 34 ............................. AGAATATCTTGCGCTACTTGCTGCTCGACTAGAC 4292121 29 100.0 35 ............................. TCTTACTAAAATTGTTTCTAATGCCCTCTATCTGC 4292185 29 100.0 35 ............................. TTGTAAAAGCCGCACATTGTTTTTCGCCTTTCAAT 4292249 29 100.0 35 ............................. CCAAGATACACTATACTGAGAACCTATGCCTTTAC 4292313 29 100.0 35 ............................. AATATTATAGCCATGTCCTTCTCGGCCTCTTCAAT 4292377 29 100.0 36 ............................. ACATCACACAAGCTTATCGGCACCGTTAGAACTCCG 4292442 29 100.0 36 ............................. TTGTAAACATAATCAATATTCCCCCCATTTATTTCC 4292507 29 100.0 36 ............................. CATAAAGTAAGCGTAGTATATGGTGCTAAATGCCTT 4292572 29 100.0 36 ............................. TATTTAAGCGCATTAGCTCGATGTAGGTCTAATACT 4292637 29 100.0 35 ............................. CAGCCGCCGCCAACGTCATGCCCGAATACTTCCGC 4292701 29 100.0 36 ............................. TATTGTTGGGCATACTCTCTTATGCCGTCCGGTAAT 4292766 29 100.0 36 ............................. ATAACGACTGCCTTGCTTAACCAATCAAGTTATTTC 4292831 29 100.0 36 ............................. ACTTCAGCCTTTGACTGTTGCTGCTCCCGGCCCCAC 4292896 29 96.6 34 ......A...................... ATGTCCTCTGGCCTGCTTGCTCTCCCATAGAGCG 4292959 29 100.0 37 ............................. ACAGCCTCAAGGAAGTTTTGCCGGCCAACAGGGTCAA 4293025 29 100.0 36 ............................. TACATTAACGCTTGCGCTTTAATTGCCAAGTTGGCG 4293090 29 100.0 35 ............................. TCCTGAATAATAGCTGCGGGTATTTGAGGCGGCTC 4293154 29 100.0 35 ............................. TTAGCGAACATAGCAGTAATTAGTAGCGGATCTAC 4293218 29 100.0 34 ............................. AAAGACAAACTTTGTATGTTTTGAGGGACTATGA 4293281 29 100.0 36 ............................. TAAATACGAATTTACTCCAAAACCAAAGGAAACCAA 4293346 29 100.0 36 ............................. ACTGACCGGCCATAGGTGACAGTAAGATCTACATTG 4293411 29 100.0 36 ............................. CCGTACTCGACTGAGCCAGGTCCTTTCTCAGCACCC 4293476 29 100.0 36 ............................. ATTATATTGCCCTGCTGCCGTGAAGTTCCCAATATA 4293541 29 100.0 34 ............................. ATCTGATTACCATCGCTATCAACCGTCGTAACAG 4293604 29 100.0 36 ............................. CCCCTAGTAAAAGAGTGGGCAGACATGGTACTGTTC 4293669 29 93.1 0 .........................G.T. | ========== ====== ====== ====== ============================= ===================================== ================== 49 29 99.8 36 CTTTGACCGTAACATGGATGTATTGAAAC # Left flank : TACACCTTTTCTGGAAAAAGACCGGAGGTAAGCATATTATGGCAAAAAATTATAATTATGTTATTCTTGTCTATGATATTGGTGAGAAGCGTGTAGGAAAAGTATTTAAGATATGTAAGAAGTATTTGGTTCCTTTCCAAAAGTCGGTTTTTCGCGGCGAAATTACTCCTGCAAATTTAATTAAACTTCGAAGTGAACTTCAAAAAGTCATTGATAAAAAAGTTGATTTTGTAGCTCTTTTTAAAATGACCGGTGATTATGTATTTGATGAAGAAGTTATCGGAGTTCGTATCCATGATCAAGAATCAATGTTACTGTAAGAAATTTCCCAACCGGCATAATCTCTAGGTGAGGCTTGCGCCCAAGAGTTATAAGGGATGAAGAGTAATCTTGGGGTAAGTGCTTACATGTTGCTCTCCGGTTGGGAAAATATTGCGAAACCCTTGCAAACGTTGTATTGTATAGCTATAGGTGTTTTTGCAAAGCTTGATTTTATTGGC # Right flank : CGGCTACACTAAACTAGACAGATTCTATAAGGTCATGTAAAACTATAAGAAAAGAAAAAGGAGATTTACATGACAACAAGACGAGCTAAAAGAGAATTTACCGACCAATTCAAGCAACAAATGGTCCAACTTTATAACAGTGGAAAACCCCGCTCAGAAATCATTAAAGAATACGATTTAACCCCTTCAGCATTCAATCAGTGGGTCAGCAGAATAAATACTACAGGATCGGCAAAAGAATGTGATAATCGTAGCCCGGAGGAGCAAGAGTTAATCAAACTTCGTAAAGAAAATCAGAAATTGAAGATGGAAAATGATATTTTAAAGCAAGCAGCGCTGATATTGGCACAAAAATAATTGTAATCCGGCAAAATGCTCATAAATACTCTATATCAGCGATGTGTAAATGTTTAAAGATTGCCCGAAGTACTTATTATTACGAGATAATTAGCAAGTCGGATGAACGCGATTTAGAAACAAAAGTTGACTATATTTTTCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTGACCGTAACATGGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 5 4294893-4295244 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLKC01000002.1 Sporomusa sp. KB1 SalpaDRAFT_Scaffold1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 4294893 28 79.3 36 TG.....AA.-C................. ATGCTCTGCGCCACTACCTCGGCTACTCTACGCTTC 4294957 29 100.0 36 ............................. TTACTACCTCGTTTAGCAATGCCAGACACCGTAAAA 4295022 29 100.0 35 ............................. GTCGTTAAACGAATCAATTAACTCTACTGCTGCGC 4295086 29 100.0 36 ............................. TTGGAGATAATACCGGATTGTACCAGGGCAGACAGT 4295151 29 96.6 36 .......T..................... CGCCAAGTTGGAGAAGGCGAATACAGAAAATACGTT 4295216 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ==================================== ================== 6 29 96.0 36 CTTTGACCGTAACATGGATGTATTGAAAC # Left flank : CCGGACAAGCTCCCTATGCAGTGGTTGTCAGTGATTTAACGTATGTTCGAGTAAATTACAAATGGAATTACGTTTGTATTCTTGTAGATTTGTTTAATAGGGAGATTATCGGCTACAGTGCCGGGATTCATAAAGATGCGCAATTGGTATATGATGCATTTGCAACAGTAAAGACAGATCTGCGAAACATCCAGATGTTTCATTCAGACCGAGGTAGCGAGTTTAAAAATGAACTACTTGATGAAGTAATTTCTACCTTTGATATCAAACGTTCCCTTAGCATGAAAGGATGCCCTTATGATAACGCTGTAGCAGAGGCAACCTTTAAAATATTTAAAACCGAATTTGTATATGGCCGAAACTTCGATAGTATATGCCATCTACGCCATGAACTAGCCCGGTATATTGACTGGTTTAATAATACTAGAATTCATGGTCTCTAAATTACTTAACGCCAGTTCAATTACGCCAATTGACCTTATAAAAATTGTCCGACTAAG # Right flank : CAGTATTTGTAGGTATCAACAAAGCAAGATAATTGTGTGACTCATGGAGACCTCGTAGCGTCTGAATTAAGCACACCGTAAATGGGCCGGTGTATAAAGAGAGTCAGGGTACTGGTAGTTGTGAGCATCAGGGTACATTCTCTCATTAATAAAGTTTACCATCTAACAAATTTAAAACGTGCATGGGACAAACGGCAAAGTACGGATATTGGGGGTAGCAGCGTCAACGTGTCTTTCTATTCCAGGTCTCGAGAATCTAGTAAACAGCAGTAGGCGTTTTCATAGGTTCAAAAGAGAAGTGCTTGTATCATTTGCCCATTATTTTGTATTATACTTTCAGAATACGAAGCAGAAAGAAGGTTTTTATCATACGGAACATAATATTTGACGTTGACGGTACTTTATGGGATACAACGGAAGTGGTGGCTCAAGCCTGGAACAAGGCAATTTCTGAAGTCGGTGGAACTGCGGCAGTGGTAAGTGCTGCAGTGTTAAAGAAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTGACCGTAACATGGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : NA //