Array 1 38403-37136 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386784.1 Actinomyces slackii ATCC 49928 G316DRAFT_scaffold00024.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================================================== ================== 38402 29 96.6 32 ............................G AGCCGTGGCCGGTGATACGTGCCGCCAACACC 38341 29 100.0 32 ............................. GGTGGAGGGGGCACTCCGGGGCGTCGTGCTCG 38280 29 100.0 32 ............................. GACGGACCTGTGCTTGTCGTGGCTCCGCTGCG 38219 29 100.0 32 ............................. ACCAACCCAGAAGGGAACAGAAATGTTCAGCG 38158 29 93.1 32 ....C.......................G TCATGCGGTCAATCTCGTCGCTGAACATTTCT 38097 29 96.6 34 ............................A TTGCGGCGCGGACTCTACGGGGTACCGCGCCCGT 38034 29 96.6 32 ............................G GTCACGCCAGTGATGTGCTTGTCGCTGTCGTC 37973 29 96.6 32 ........T.................... AGGCAAGACACCACAAGGTCGTCATCCACGGC 37912 29 100.0 32 ............................. CCATTGATACTGCTGATCATCGACCACATGTA 37851 29 96.6 33 ............................T ATGAGACTCGCGTACAGGATCATCGCTGGGATC 37789 29 96.6 32 ............................T GTGTTCTACCCGGATCTGAACCGTTACTGGGT 37728 29 100.0 32 ............................. GGCCTCTCGCGCGTGGGCGCGCGTGTGCGGGC 37667 29 93.1 32 .............C..............G GGCGGGGTCGGCAAGACCTCAACGACCCTGGC 37606 29 100.0 32 ............................. AAGTTCACCATCGGCCAAGGCGCCAGCCCCGA 37545 29 96.6 32 .............C............... CTGGGGACGGCGATCAACGCCGTCGTCCCGGC 37484 29 100.0 32 ............................. TACCTCAAGCAGTTGCAGCTTGGCATCAAGCG 37423 29 100.0 32 ............................. AAGCCTGCGTTGGCACTGGATTTGATGGAGGA 37362 29 89.7 14 .............C.........A....G CATGGCGGCAAGCA Deletion [37320] 37319 29 89.7 126 ....G......A.............C... GGGGCTCGGATGACGCCAATCTCTCTGCGGCAGGCATGAGTCGGGTCCAGGACTGCCCCACCGAGAATCGATGGTGTCTTCTGGACCCAACCGCCACGGTACACCGATCCGACTACCAGTGCCAGA 37164 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================================================================================================== ================== 20 29 97.1 36 GTAAACCCCGCGCACGCGGGGATGATCCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AGGCCAGCGGTAGGCTCGGCGATCATGCGGGCGTAAGCCCGCGCACGCGGATGATCCAAGCTGATCAGCGGGCAAGGTCGCTGGACCTTCCTCGCCAGGGGCAGGAAGGATCACTGAGTCCTGAGCTGAGGGCGGCGGCACGGATGTCGTCGAGCGGCACCGACGCGTTTGTCCACCGTGAACAACTTTAAGACTTTCCGCCACTTACCGCAATAGTAAACGCGCAGGTCAGAGCATATTTCCAGTGCAGGACCTGCGAGCGGAGCTAGGTAAAGTTGTTCACGGTGGACAAAACTGGCGCGGATCACCGGCCGGTCCGCTGCCAGCGGGCCGATGCCAGGACGACATACTGAGCATGGCCGCACTCCCCCGGATCAATCATCTAGGCTTCTCACCCGGGCCGCGCCCTGCGCCGTCGGCCCTGAGCCGCTGCCCATCACCCCCAAGGAACCCTCATGCGCGTCCTGGCCGCCCTGTCCGGCGGCGTCGACTCCGCGGTC # Questionable array : NO Score: 5.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.50, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCGCACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [31.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 41545-40600 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386784.1 Actinomyces slackii ATCC 49928 G316DRAFT_scaffold00024.24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 41544 29 96.6 32 ............................G GCGTGGAGGAGGGGGGTCTGATGCTGACAGCA 41483 29 96.6 33 ............................A CAAGCGTTCGATGGCGAGCGTCACACAAATCCG 41421 29 100.0 32 ............................. CCAAACCCAAAACCAAAACCAAAAACGAGACC 41360 29 100.0 32 ............................. TACCCACGAACACATGTTCACACCAATCAAAC 41299 29 100.0 32 ............................. GGGGGCATCTAGTGCCGCCCGGTCCCCGCGCA 41238 29 100.0 32 ............................. GCGTCACACCCCAGTCACCCCAACGAAAAGTC 41177 29 100.0 32 ............................. TCGCCCCGCTGGTCCAGGCCCCAGATGAGGTC 41116 29 96.6 32 ............................G CGCACCAGTGTGAAGAAAGAGTACCTGATCAA 41055 29 100.0 32 ............................. GGCCTCTCGCGCGCGCGCGTGTGCGTGTGGGC 40994 29 100.0 32 ............................. CAAGCTCCGCTGCGGATCTCTACCCGGTCACC 40933 29 96.6 32 ............................G GTGACGTTGATGATGTTGTCGATCAGGCTGTT 40872 29 96.6 32 ............................G CAACTGGTTAGCAGCCCGATCATCTACCGCTG 40811 29 100.0 32 ............................. ACGGGCAGGGAAGCGCAGGGCATCCGGCACAG 40750 29 96.6 32 ............................G AACAGGACGTCCCCGGGGCGAAGCCCCTGAGT 40689 29 100.0 32 ............................. CTCAGCCTCAATCAGGGCCGCCAGTGCCGCTT 40628 29 96.6 0 ............................N | ========== ====== ====== ====== ============================= ================================= ================== 16 29 98.5 32 GTAAACCCCGCGCACGCGGGGATGATCCC # Left flank : CGTGCA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGGGGTAAACCCCGCGCACGCGGGGATGA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCGCACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-3.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 23880-24824 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386787.1 Actinomyces slackii ATCC 49928 G316DRAFT_scaffold00032.32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 23880 29 100.0 32 ............................. GAACCTCGTGGCGTCGTCAGCTGTCTTGATCA 23941 29 100.0 32 ............................. AAGACGCCACTCTCCCCTGCACCGTAGGTGCA 24002 29 100.0 32 ............................. GTACCAATCCGGACTATCCAGCGGGAGCGCAT 24063 29 100.0 32 ............................. GTCAGAACGCTTGATGCGCTACGCAGGTACGG 24124 29 100.0 32 ............................. CACCGACGGGGGGTTGGCTGCACTGATAGGCG 24185 29 100.0 32 ............................. GGGCACCTGGAGCACCACGCCGTCTCGCCCGA 24246 29 100.0 32 ............................. CACACCAAATGTCCGAACAAAACAAGACGTTC 24307 29 96.6 32 ............................G GGCAGCCAGGATGGAGGTCTCAAGCGCGTCGC 24368 29 96.6 32 ............................G TCCTAGAGAATCAGTTAGGTCACCCTCACCTC 24429 29 100.0 32 ............................. GCACGCGCACACACGTACGCGCGCCCCCACGC 24490 29 96.6 32 ............................G CCGTAGGGGCGATAGCCCCCAGGCCGATCAGT 24551 29 100.0 33 ............................. CCCGGCCCGCTGAACCACCTACGGGGGGGGGTT 24613 29 100.0 32 ............................. ATTCGTTCGATGGCGCACGTCACACAATCCCG 24674 29 100.0 32 ............................. CGGCCGACCCAGTCCTCCCAGTGCTCGTCGGG 24735 29 100.0 32 ............................. ACCGAGTACGGTGGAGCAAACATCACCACGGG 24796 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================= ================== 16 29 99.1 32 GTAAACCCCGCGCACGCGGGGATGATCCC # Left flank : GGACAACCCCAATCAAACCCATCACAACGTAAACCCCGCGCACGCGGGGATGATCCGCCCATTGAGATTCAGGGGGCTGAGAGTCGAGTGTAAACCCCGCGCACGCGGGGATGATCCGCCGAGACCTATTGAGGCGATACCCCCGGCGTGGTAAACCCCGCGCACGCGGGGATGATCCGGTTCAGGCCCCCACCGATCTTCGCCGGCCACGGTAAACCCCGCGCACGCGGGGATGATCCGTGCAAGTTCTTGTGCGTGCACCCGTCCACTGGGTAAACCCCGCGCACGCGGGGATGATCCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAACCCCGCGCACGCGGGGATGATCCCAGGAAAGGACAGTGGTTCAATGAGTAACGAAC # Right flank : GCGGCCGACTGCTGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCGCACGCGGGGATGATCCC # Alternate repeat : GTAAACCCCGCGCACGCGGGGATGATCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 25997-26941 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386787.1 Actinomyces slackii ATCC 49928 G316DRAFT_scaffold00032.32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 25997 29 100.0 32 ............................. TGCTCAACCCAGTCCTCCCGGTGCTCGTCGGG 26058 29 100.0 32 ............................. ATCCGGAAGCAGCTCACCGCGCCTCTCCTCTC 26119 29 100.0 32 ............................. AGTTCCGTCCCAGTACCTGACTGGCACCTCAC 26180 29 96.6 33 ............................T CTCTCGCCATCCTCGCCGTCCCAGAGCCTGACC 26242 29 96.6 32 ............................T GACTGGCCCCCAATCCTCGCCGAGGCCGGCTA 26303 29 96.6 32 ............................G TCTCCCACCATGTCTGCGACCCACGGGTCGAC 26364 29 96.6 32 ............................G GCCCGGAGGAGGGGAGTCTGATGCTGACAGCA 26425 29 96.6 32 ............................G CCGTCAGGATCGCGCTAGCCAGCTCGATGTCC 26486 29 100.0 32 ............................. CGGTCGACCCAGTCCTCCCGGTGCTCGTCGGG 26547 29 100.0 32 ............................. TGTGCGTCCGCACCATCACGCGAGTAAAAGGT 26608 29 96.6 32 ............................T CCTGGGGCGCAGCTCCCGCACGAACCGGTCGA 26669 29 96.6 32 ............................G CCACAGGTTGTTCACCTTGTAGACGTAGCCGC 26730 29 100.0 32 ............................. CTATCGACCCAGTCCGCCCGGTGCTCGTCGGG 26791 29 96.6 32 ............................G CCACGACACGCCCGCACGCGCACACGCGCGCA 26852 29 100.0 32 ............................. GAGGTTTTGGCTCGCCTCCCTGACGGCATGGA 26913 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 16 29 98.3 32 GTAAACCCCGCGCACGCGGGGATGATCCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT # Right flank : CCCCGTCGGTGGTTCAGCGGGACGGGTTGGAGTATGGCCGAAATTAAACAAAACCGTATTCCGGGGCTTTCTGGGCTGGATATGACGGCACCTTTCGTTGTAGAATTTCTTCATGCACGTGGTTGTG # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCGCACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3540-4143 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386786.1 Actinomyces slackii ATCC 49928 G316DRAFT_scaffold00026.26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 3540 37 100.0 36 ..................................... ATTAGAAAGATCGCCGCCAGCAAGTCATAGCTGGCG 3613 37 100.0 33 ..................................... CCTCGACCGTGGTCCTCGGGTTGTCTTCAAAGG 3683 37 100.0 36 ..................................... ATTAGAAAGATCGCCGCCAGCAAGTCATAGCTGGCG 3756 37 100.0 33 ..................................... CCTCGACCGTGGTCCTCGGGTTGTCTTCAAAGG 3826 37 100.0 31 ..................................... GTTCACGTGAGGTTGAGGTGGTGCTGGGCGT 3894 37 94.6 32 ........A.......................A.... GCGGGCGTTGCGAACGCTTGCCCTAACATCAA 3963 37 97.3 35 ................................A.... GTGTGGACGAGGTTCCAGGACCACCCGTAGTACTC 4035 37 94.6 35 ..........G..G....................... ACGCCCATCCAAGGGAAGAAGTCCCAATCCGGTAC 4107 37 94.6 0 ...................................TA | ========== ====== ====== ====== ===================================== ==================================== ================== 9 37 97.9 34 GTCAGAAGGCACCACGCGCCATAAGGTGCATTGAGAC # Left flank : TTCAGTTCGTGGGTCTGGGGTGGGATCCGCGTGATTCCGCACTGGTTCGTGTCTGACGGTACCGCTACAGTGAGGTTTTCTCGTCAGGGTTGATGAGAAAGGCCCATCGAGAGTTCTGATGATGTCGTGCATGTCTATCGTCTGTGTCGATCCTGTCGCGATCGGGTGCAGGTCCTGGGCGTGCCGCCCAGTCAGGATGACGGCGAGCTGTACCGGGGTCTGTTCTGATGTGTGGTGAGGGTGGGGCGGGGAGTCGGTGGGGCGTGGTCCTGGAGGGCGAGGGGTTGTCTGATGTCGAGTGGTGCGTGGGCACTTTTCCGCAAGAGGTCGTTGAAAGCCGGGTGGCGGGGGCTTGAGAAGCGCGTCGCTGGCGCTGTGGCGCTGACCTGCGCGGATGTGGTAGAACTGCCTTGGTGCCGAGGCGGTTCGACAGGTGCCTGAGAGCCGCTGGCGCTACTCGTCGCATCGTCCCTGGTCACAGGGGGTGGATCGAGGGGTGG # Right flank : AAGAAGGCGTCGTGTAGCAAATGGTGCAGTTTGGCTGTTTCGAACACGTTGTCAGGATGTCGGGGCGCCCAGCATTCATCCAAAGGTGCTTGCGATCGATTTGGATCAACCCATAAGAATTGCGCTCATTTAAGTTGACTCTTCACGATCAGACGTGTCGCATTCTCTCGGTCAAACGTGCTCTGACCTGCGCGTTTGTTGAGTAGCGGCATGGCTTTCCTCAAAAGGTATCGCCGCTCGTCCACTTGTGCTAGGTTGCCGTCGTTCCAGACGCCAAAGAAGGTAACCATGTACCTCGTCATGCTCGAGACCGGCGGCAATCAGCGCTACGTCTTCTCCTCGCCGCGCCAGCGCGAGAACATCGGCGGCTCCTTCCTGCTGACGATGCTCGCCCCATGGACGCACGAGATCGCCGCAGCCCTGAACATCACCACCACCCGCGTCTCAGACTCCTCCGGCAAAACCATCCTCACCGTCCCCGATCAGGACTCCGCCACCAG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAAGGCACCACGCGCCATAAGGTGCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA //