Array 1 34-262 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLH01000140.1 Anoxybacillus sp. EFIL NODE_141_length_291_cov_19.6646, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 34 30 100.0 34 .............................. AAGAAAATAAAAGTAAGTTAAGTTCATGATAACC 98 30 100.0 38 .............................. GCGAATCCTCCAAGTGTCGAGGTTGTAGATGAAACAGC 166 30 100.0 37 .............................. TCCCAGAAGGATATCACAATGGGAGCGGAATCGTCAA 233 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 100.0 40 GTTTTATCTGAACGTAGTGGGATGTAAAGA # Left flank : AATAGGCGAGTGCATGACCAGATGCAAGGTGCAG # Right flank : CCGTTTCACGAATACGTTCTTTTAATACC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATGTAAAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [26.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 400685-400521 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLH01000001.1 Anoxybacillus sp. EFIL NODE_1_length_596376_cov_44.7176, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 400684 30 100.0 39 .............................. CCAGCAGTTTCTTCGACTGCTTCTGCGACATCAGACTCT 400615 30 100.0 35 .............................. GCATATACAATCATCGCGATACCTGCCGAAAGAAG 400550 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 3 30 100.0 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GCATCGAATCGATCGAAGAAGACGGCACGATTTGCATATATTCCGATGTCGATGAGACGTACAATATGTACGTTTACGATTCTGGGAAAGGAATTCCACAAGACATGCAAGCGACGATGTTTGAACCGTTTATGACAACGAAACCGTCAGGGACAGGCTTAGGGTTAACGATCGTCAAACGAATCGTTGAAAACCATGGCGGAACTATTGCGCTTCATGACAGTTCGGAAAAAGGCACGACGTTTGTTATTAAGCTACCGATCGGATAATGATGAGAAAAGGAACGGATAAAACGACAAAAGGATAATCAATTTGTTCATCATTTCACAACTGTCGTCGACCTCCAATCTTGCAAAAAATCCGGGGGATCGACGACAGTTTAATTTTTGTCACTTTGTCAGACGTATCAAGCGACAAAGACCATTGACTGAATTTTCGGATGGATGTATAATGATGTTGTATAGCTTTTCCATGTGTTGATATATCAACACTTTTTTGGG # Right flank : AACAAATCAGAATAAAAAGCACCAAAAGAACAATTGTTTGTATCGTACCTACAAGAACCAGCATGTTAGAATCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTCAACATTCGTTATTATATAGAGTAGAAACATCTTTCTTTCCGGCTATGGTGAAGTGAGATGTTTTTTTTCATGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTCGTGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACGGCGAATGGGCTTGTGCGTGATTCGGGGCTGTATGACATTGTTGCGGTCATTGATTCGACAAAAGCTGGTCAAGATGCTGGAGAAGTACTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAGAACGTCAA # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 409637-412391 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLH01000002.1 Anoxybacillus sp. EFIL NODE_2_length_522318_cov_49.9972, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 409637 29 100.0 40 ............................. ATGTTCGTGAGCGCGAATACGAGGGAAATAAGAGAACTGA 409706 29 100.0 36 ............................. AACACGCAAAGAATGCTGTCTAATCTCATCACCATA 409771 29 100.0 37 ............................. ACAAAAAATCAAAAAGTAAATCGAAATCATAATCAAA 409837 29 100.0 36 ............................. GCTCGTCCAAGTCACGTTTGCAGCGAAGGAATTCCT 409902 29 100.0 40 ............................. GGTCTAATTCGTCATCTTTCGGAACAAAAGAAGGAGGCGA 409971 29 100.0 41 ............................. AAAGCGATTAAGGCTAAAGTGAACAAGATGAGGCAGGCAGG 410041 29 100.0 40 ............................. TGTAAAAACGCTTTTTCTGTGCGATCGTCACTTTCTGCGA 410110 29 100.0 40 ............................. TTTTCAATCGTTCGAGGATAGATTTCTTGTCAACCTTCGC 410179 29 100.0 41 ............................. GGCATTTATGCTGGGCTTTTTTGGGATAGAAGGTGTTTTTA 410249 29 100.0 36 ............................. TAAGGTGATGGCGGAATAGGTAGACGCATGATTTTC 410314 29 100.0 38 ............................. ACAGTAGAAAATCGCGTCGTGATCTCGGCGCATTCATA 410381 29 100.0 40 ............................. AAATCAGTAATTCTATCATTTGTCGAAACAGACTGATAAC 410450 29 100.0 37 ............................. ACGCTCGATTGCGCGCTGTTTCGCACTCTTTTTTACA 410516 29 100.0 39 ............................. ATGAATGGTTTAAAAAGCAAGTTTCCCCTACTTTTTATG 410584 29 100.0 36 ............................. AAAAATAGGCGAGTGCATGACCAGATGCAAGGTGCA 410649 29 100.0 35 ............................. AAAGAAAATAAAAGTAAGTTAAGTTCATGATAACC 410713 29 100.0 38 ............................. ATCCCAGAAGGATATCACAATGGGAGCGGAATCGTCAA 410780 29 100.0 38 ............................. ACCGTTTCACGAATACGTTCTTTTAATACCTCATAAGA 410847 29 100.0 35 ............................. CTACCTGTAATCGGATAAACCCAACCTGCTTGTAC 410911 29 100.0 39 ............................. TTGCCTAAACTTTTTAAACTCATAGTTTGCCATTTTTAT 410979 29 100.0 36 ............................. ATTATTGCAAAAAACGAAAACCATCTATGAAGTAAG 411044 29 100.0 35 ............................. GTGTTACAAATACGAGGGCGCAAATTTTCATTTTC 411108 29 100.0 37 ............................. GTGATACCTTTAGTCAATTAGCGACGCATATTACAAA 411174 29 100.0 38 ............................. CAGGTTTTGAAGATGTAAAAACTTCTGTGACTTCTACT 411241 29 100.0 36 ............................. AAGCATCTTGTAAAGCTAGCATGTATTCGAAATCTT 411306 29 100.0 35 ............................. TTTCTTTCTCATCTTCAACTACTGTCGGAACAACG 411370 29 100.0 37 ............................. AAAGAACGTTTAGTAAGCGCCCCGCGTATTCGAGATA 411436 29 100.0 36 ............................. GTTTTTCGCGTTGTTGCTGGATCTTTGGCGGAAAAG 411501 29 100.0 35 ............................. ACAAATGTTTCTGTTTCATAAAATAAGATGTCCCC 411565 29 100.0 38 ............................. AGATTTTGAAATATACGCGGCTTTAAAAGAGCGTGTCC 411632 29 100.0 38 ............................. TTGTTGATTGTTCAGCCACCAGCAAAATTGCGCGAAGG 411699 29 100.0 37 ............................. GAAAAACTTATTCTTTTCTATGTTTTTTTGGAGTAAA 411765 29 100.0 35 ............................. TTAATTTTTCTATTTAAACGTGGCGCATCATGTAA 411829 29 100.0 37 ............................. TTTTGGGTGCAAAGGTTGGATGAAAAATGAACGCAGA 411895 29 100.0 37 ............................. CGAGCATTTCATCATCTTGCGTGTTCCCTAATAGTAG 411961 29 100.0 38 ............................. ATACATCTGTCGATAATGATTTTAAATTTCTCATTTCC 412028 29 100.0 39 ............................. TGGGACATTGGTCGGGCATTTGACGCGGTTTTTGGTTCA 412096 29 100.0 37 ............................. CTGGACTCATTTTTTCAATCATTTCGCGTGTCAGCGG 412162 29 100.0 38 ............................. TTCGGATACAACAGCGTACGAAACAAAGATTTGTATGA 412229 29 100.0 38 ............................. TTGTTTTCGACTTTTTCGAGCCGCGTGAGCCTTTTACT 412296 29 100.0 39 ............................. CTAGTAGTGGTCATAACGTTTTTTAAAACGGTAGGTGAT 412364 28 72.4 0 .........A.......-.T..AA..TCC | ========== ====== ====== ====== ============================= ========================================= ================== 42 29 99.3 38 GTTTTATCTGAACGTAGTGGGATGTAAAG # Left flank : ACATTTCATTGGCGATGAGCCTTATAAACCATTGAAAGCATGGTGGTAGTTATGTTTGTAATTATTACGTACGATGTTGGGGAAAAGCGCGTAAATAAAGTGTGTAAAAAGTTAAGAGAGTACTTAACATGGACACAGAACTCTGTGTTCGAGGGGGAAATTACTAAAAGTTTGTTAATGAAATGCTTAAACGAAATCGATCAAATTATCGATGAAGATGAGGATTCCATTTATATTTACGAAGTGGCTAATCCGAAGAACATCAAGAAGCAAGTATTTGGACAGGAGAAAAACTTTGATGAACTTTTTCTTTAACATTTGCAGTGAACCTCTAATTTGAAAAAACGGAAAAAATGCTTGATATATCAACAAGAAATGCGGTAGTTTTAGGATAAGAAAAAACACGACTGACGCTTCACTGCAAAAAGTAGAAACTTGTCATATCAACCATTCTCCAAAATCGTTGATATGACAGCACTTTGTGCTTTTAGATTTGAGGG # Right flank : CCCCTTTCACCTAATTTTCACCATTCACTCGTACACTTACGGTATACAGTACATGATATGGTGAATCAGGGGGATATGTGTTGAAGAAAAACATCGTAAAAATCATATTGGACGTCTCAATGGCGATTACGTTTGTGTTGTTAATGAATCCGAGAGTGTTTAATGGATTGCCGTTTCATGAAATTGCTGGAACTGTAATCGGAGTGGCGATTCTTGTTCATATCGGATTGAACTATCGTTGGGTAATCAACACGACGAAAAAAATATTTTCTTCCGAACTTCCGAAGAAAACGAGGATCAGCTTTGCCTTAAACATCTTGTTGCTTGTTTCGATGGCAGCGGTCATTGTATCGGGGATTTTGATTTCGCGTGTTTTGTTTTCGAACGTCGCACTAGAGGGGAACCATTTTGTACGGGAAATTCACGACCTTTTCGCCAACACAACGCTTGCTTTAGTCGGCCTTCATCTCGGCTTGCATTGGCAATGGATCATGGGTGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 79518-79657 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLH01000003.1 Anoxybacillus sp. EFIL NODE_3_length_321229_cov_60.2549, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================== ================== 79518 24 100.0 42 ........................ TAAAACTTTTGCAAAAGACCGACATGAAAAATGTGCGGATTA 79584 24 95.8 26 ............G........... CAAAATAGTGTCTACAGAAGGGGAGA 79634 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================== ================== 3 24 98.6 34 TCTTTACATCCCACTACGTTCAGA # Left flank : ATCAGATATCGATCCTAGTTTTAATCTTGAATGGGATGAAAAACCAAATAGTATCAATTTAACCTTCACCAAACTCCCGATCGTGGGGGCGGTCAGCTGCGGAAATGGCGTGTTGGCATACCAAGATATCGAGGGGTATGAAGAAGTGCCAACAAGTTGGTTGAATGGCGGCGAATATTTTTTTGTGCGTGCGAAAGGCGACAGTATGATTAACGCGCGTATTATGGATGGCGATCTATTGCTCATCCGAAGGCAGGAAGATGTGGACAGTGGAGAAATTGCCGCCGTCCTAATCGACGACGAAATTGTTTTGAAGCGTGTGTATAAAACAAACGGTACAATTATTTTGCAAAGCGAAAATCCGAAATACCAGCCGATTGTTTTACAAAAGACAGACATGAAAAACGTACAAGTCATCGGGAAATTAAAAAAAGTGGTATTAAATTTTTGACGTCAGAAATTTAAAAGAGCAACGCAAATGGTTGCTCTTTTAAGCTATT # Right flank : ATGAGCTATGCTTTTATTATAAATTCTAATTAACTATTTTTCTATCATTTTTATAGAAAGGAGTAGTCATATGCCAAGTTTCCGTAAGCACGAGAATGGAACGTGGGAATATCGCATTCGATATAAAGACAAAATCACAGGAAAGTACAAAGAAAAAGCGAAGCGTGGGTTCAAGACAAAAAAAGAAGCCCAGTTGGCTGCCGCACAAGCTGAAATGGAAATTGCGTATCACGGCTTTACGGAAGACGGAAATGATCGAGTAGATACGTATTTTGAAAAATGGCTGGAAGTATATAAAAAACCGAATGTGAAGCCGATTACGTATACGCTCCAAGAACGAAACGTCAGACTTAACATTTTGCCACGCTGGGGAAATTACAAGCTAAAAGAAATCGATCGAGTCGAGTATCAGAAGTGGATTAACGAATTAAGACAACATTATAGTGAAGGAACAGTTCGGCGTATTCATAGTTTGATGAGTTCAGCACTCAACGATGCGG # Questionable array : NO Score: 5.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.19, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTTTACATCCCACTACGTTCAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //