Array 1 22233-20844 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABLBX010000022.1 Vibrio fluvialis isolate MGYG-HGUT-01703, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 22232 28 100.0 32 ............................ CCAATAGGGGCTTTTATTTTACCTCGTCAAAT 22172 28 100.0 32 ............................ AAACGTGCTTCTGTGGAACTGGCTCAGATTAA 22112 28 100.0 32 ............................ ACTTTGTTTTTTCCACATATCCATGCGTAGCC 22052 28 100.0 32 ............................ GCCAGTACCGGACGAAGAAACAATCAATAACA 21992 28 100.0 32 ............................ TTGTATTCGCAAGCGTAGCGCGCCAGTGTTTG 21932 28 100.0 32 ............................ AAGACGAGGCGTTTCAACTGGTGGCACGACGT 21872 28 100.0 32 ............................ ATATTGATCGGGTTAACCACACATTTTACATC 21812 28 100.0 32 ............................ TATGAAGTCGAACGACGTGAACCGGATTACGA 21752 28 100.0 32 ............................ AGGCACACCGGAAGATATGGCTGGTGCGATCC 21692 28 100.0 32 ............................ TTTACGGTTCCGTCACGGTTCTGAATTACCAC 21632 28 100.0 32 ............................ TTCAATGTCTGCCGCAAAACCGATTTTCGCGA 21572 28 100.0 32 ............................ AGCCCAACATAACGGTTGCCAAGCGTATCGAT 21512 28 100.0 32 ............................ TGACCATTGAATTAAGTTCCGATCGTGTTTAA 21452 28 100.0 32 ............................ TTTTCGTCGCTGGCGACGGACTTGATTCGTTT 21392 28 100.0 32 ............................ CCGCAGGGATAAGGGAGCAAGCCTGCGACCGA 21332 28 100.0 32 ............................ GTGATGACCAAGCAGGAATAGCCCTTGCTCAT 21272 28 100.0 32 ............................ AAATACCTGCAGGACTACATCAAAACCCAATG 21212 28 96.4 32 ........................A... GCAATCAAAAGAAGTGGTGACGGTGATTGAAA 21152 28 100.0 32 ............................ TGCAGTATGTAATGTTGGGTCGGTTGACTCCG 21092 28 96.4 32 .............G.............. TAAACCTGTTTACCTGGTGTTAATGAGTGCCT 21032 28 100.0 32 ............................ ATTCTAAAGCGCACGACAAACGTTCTTAAATC 20972 28 89.3 13 .........................CTG TATATGAATTTCT Deletion [20932] 20931 28 92.9 32 ...T................G....... TTGACGAAGTACTTTACCCCAACTGCCCGCTA 20871 28 71.4 0 .C.......TAC.......AGG.....T | ========== ====== ====== ====== ============================ ================================ ================== 24 28 97.8 31 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAACGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGCAAACCGCTGGTGGAATGTCTAGCGGATTTGCGACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAATAGCAAGTTTCCGCTGTTTATTCAGATGCAGCAGCAAAGTACATCACAAGATGGGGGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGCCAATCAGCATTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTATTTTTTACCCTTTATTTTTGCTATTTAAAAATATGCTTTAAATACAAATGGTTGCAAATGGTGGTTTTTAACAGGGCAAAAATGCATTTTTCATCCTAACTACTTGTTGCAGCATTCTTTTATAGAATTATTTTATT # Right flank : TAAAACGGGATTCATGGCAAACGGTCGTGGAAGTTGTATCTTACACAAAAACCTAACGACGTCGATATCAATAGGTTTTTATGTGTATTTATTGGTATATTTAGTGCGTTATTCTGAATTGGTTGCAAGAGACCAACATTAAATTTTTCATAATTGTTTATTGATTTGGTTAAATCATACGTTATTTTCGATAACAACAATGACATTTTAGGTTCGCAAGTATCCAATGATGTTTTATTTCCAGCATTACTATTTCTTACATTGCCACAAAGCATCCTTGTTCATATTACCCAACTAGTGACAGTGTCTCCGTCATTACTTGATACCCAATCTTCTCGCTAGGCGGTGTAGGTTTCCACTATCCAGTTCCAATTGTCGAGCCGTCGCTGCCCAGTTGCCTTGGTTATGATTGAGCGTTTGAACAATGATTTTTTTTTGATACCTATCCGTTGCTTCTTTAAGCCCCATACCTGATTCACTAATCGGCGAAATGTTGGTTG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1794-1645 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABLBX010000017.1 Vibrio fluvialis isolate MGYG-HGUT-01703, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 1793 29 100.0 31 ............................. TGGCGAGCGACGGAAACCGTAAATGTGAAGT 1733 29 96.6 31 ............................T TGCACGGGCGCAAGCCGTTCCGGACGTTCAA 1673 29 79.3 0 ....................A.TTA.C.C | ========== ====== ====== ====== ============================= =============================== ================== 3 29 92.0 32 GTTCACCGCCGCATAGGCAGCTGATAATA # Left flank : GCTGACATGACAGCGCTTGGATACTTCAACATATCGGAGTCAACAATGGTTCCTGAAGAATGCCATCTGGCTGTTTTTCGACGCAATCAAAAAATCGACCAAGCGACACCGAATGGGCAAAGAATCAGAGCCGAACGTTTGGCGAAACGCGCTAGAGATAGAGGCGATTCACCTACTCGATTTACCCCAGAAGACCTTTTGTTTGAACATTATCATTCTATACCGATAACCAGTACCCGTAGTGGTCAATCATTCAGGTTAAACTTGCAATATCAACAACTAGATACCGTGGCACATGGAAGATGGGCATTCTCAAGCTACGGGCTTGCAAATAAAGAACTTGAAAGTTGCCCTGTTCCCGTCATTTGACCAATTTAATATTCATGCCCTATAATTTCCTGATTTTTAAACAAAAAAATTAACCATTAAAATAAAAGGTATTATTTTTGCTTTACCGATTAATAGATTGATAAATATACACTATATTTAAATTGACCATT # Right flank : ACAAATAGTCTTTTAAAGACTGTTTGCCTTGCTAATAATTGAGGATTGTAATCCTCAATACTACTGCAAAAGTAGTTGATAACAAACGTACCACTTTCATTCGAGCTCGTGATCAGGTACTACTGAATAAGTAGATATTGAAAAATTGGCCAGCACATTCAAATAGTTATCGACATTCCGTATTTTTAAGACGGAGAACCTCGAGTATCACTCCCAAGAATCATGGCTGCCGAACCTCTCACAGCTGTACTCGTTACGCCTACCCGCGACAACCGGGCCTTTTTATACTATTAATTGTCAATTAGAAGCGACTTTTCTTTAGTATGTCGGTGAATCATGTTGCCATATCGTGTGAATATACTTTGTACCCTGATAAGAGGTTTCAAACTCAATGTCCTGTATAGAGAAACTGTGGTCATCTAAAATTGCCCACGGTTTTAGAGTTTTCCCAATACAGCCTTTCAGATTTATTGAGTGCCAGCCCGCCGTTATATTGATGG # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGCATAGGCAGCTGATAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //