Array 1 10861-13667 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOHL01000015.1 Oceanicella actignis strain DSM 24423, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================ ================== 10861 29 100.0 32 ............................. TCCTTTCCGCCGCCTGTCGCCTCGGGGATGCC 10922 29 100.0 33 ............................. GAGCACGTCCCCGCTGCCATCCTGCGGATGGTG 10984 29 100.0 32 ............................. ACCACCACGCCGCTGACCTGGGAGGTGAACGG 11045 29 100.0 32 ............................. CTGTCGCCGGGGCCGAGTGGCGCGCCCCAGTC 11106 29 100.0 32 ............................. GGCATGGGCCCGCCCGAGGTCAGAAGGAGAAG 11167 29 100.0 32 ............................. GTGACTGCGCGCGAGGGCGACGTCCTGGAGCT 11228 29 100.0 32 ............................. GTCAGATCGCCCGGCGTTCGCGGCCTGCGCCA 11289 29 100.0 32 ............................. ACCGCGCCCTCGCGCCCCGCCCAGGTCTCGAT 11350 29 100.0 32 ............................. TGGGACAGGCAGCGAAGCTCCAGCCCGCTCAT 11411 29 100.0 32 ............................. AGATCGCGCGTATCGCGTCCCGCGCAGCTACG 11472 29 100.0 32 ............................. CCTTCGTGTTCGGCAGAGTTCTTAGCATCCTA 11533 29 100.0 32 ............................. TCGTGCTCGACGACGGGAAAGATGCCCGCAAA 11594 29 100.0 32 ............................. TAGGGCAGGGCAAGGTTCGTCGTCTGGCTCAT 11655 29 100.0 32 ............................. AACACGTCGCCCGTGCCGTCCTGCGGATGGTG 11716 29 100.0 32 ............................. GACGACATCGCCCTCATCGTCCAGGATATCGC 11777 29 100.0 32 ............................. GTCGAGCCGGACGCGTTGGCGACGACGCCCTT 11838 29 100.0 32 ............................. TTCTTGTTAAATCGGCCAGTCTCGAAGAACAA 11899 29 100.0 32 ............................. ACGACCTCGAAAACCGAGTAGCCGTAGGGCAC 11960 29 100.0 32 ............................. TCCACACGCACAGGCCGGCCGTTGACTTCGGC 12021 29 100.0 32 ............................. GGCCTCGACCGCCTGAAACAGGCGGTCGGACG 12082 29 100.0 32 ............................. CGGACGGGGCCGTCCTCCTGGCTCTCGTGGCT 12143 29 100.0 32 ............................. AGACTGCGGCGTTCGAACGTCGAGCCGCGCGA 12204 29 100.0 32 ............................. ACGCAGGTTATCGAGGCACACGCCCCGAACGC 12265 29 100.0 32 ............................. AGTGAATGTCGATCCGTTCGCGTAGATGCCAA 12326 29 100.0 64 ............................. CGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC 12419 29 100.0 32 ............................. GCCGGGCTGACCAAGAACCCACGGCTGGTTGC 12480 29 100.0 32 ............................. ATCAGCGCGAGAATCAGCCGCATTTGAACGCC 12541 29 100.0 32 ............................. ACCGGGGCATGCAGGTGGATGCTGTCCTCGTC 12602 29 100.0 32 ............................. TTGCCCAGCTCGCGCGCGATGCGCATCACCTG 12663 29 100.0 32 ............................. ATGGCCTGCTCAGCGATGTGGTCGGGCAGCGC 12724 29 100.0 32 ............................. GTATGTGCAGTGCACCGCGAATCCCTCGCCGC 12785 29 100.0 32 ............................. ATGGCGCGGCGCGTCGGCTCGGACAGCCAGCG 12846 29 100.0 32 ............................. ATCCAGCAGATCTCGAACGGATTCGTGCTCTC 12907 29 100.0 32 ............................. GCTGTGTATGAGATGATGCTCAAGGACCGGGC 12968 29 100.0 32 ............................. GGTTCGCCTGCGGCCATCGCGCGCGGGTTCCC 13029 29 100.0 32 ............................. CGAAATCAGCACATCGAAATAGCTGCCATCAG 13090 29 100.0 32 ............................. CGCTCGCGCGAATCGAGGGGAGGCTGTCGCGG 13151 29 100.0 32 ............................. GGCGAGCTGTCGTTCCGGGGCGGTGGAGTCGA 13212 29 100.0 32 ............................. ATCTGTTGCAGAAGCGCGGCGCTTTCCGTGCG 13273 29 100.0 32 ............................. GATTTGGCCTTCCCGTCCGCCTCCACGACGGA 13334 29 100.0 32 ............................. AATTCCGTCACCTGCTGGCCCTGATCTGGGGC 13395 29 100.0 32 ............................. GAGATCGCCCGGCGCGAATGGCTGGAAATTAC 13456 29 100.0 32 ............................. AGACCACATGATCCCAGATCGCCGCCTCGTCA 13517 29 100.0 32 ............................. ACATAAGCGCGGACATTCGCAGCCGCCTGCCA 13578 29 100.0 32 ............................. GTCTATTGCGAGCCATTCTGCGGGGCAGCGTC 13639 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================================================ ================== 46 29 100.0 33 GCGTTCCCCGCACACGCGGGGATGACCCG # Left flank : GATCCGCAGGAGGGACCATGACGTTGATGGTGGTGACGGTGACCAACGCGCCGCCGCGTCTGCGCGGCCGGCTGGGCGTCTGGCTGCTCGAGGTGCGGGCGGGGGTCTATGTAGGCGACTACTCTGCGCGTGTGCGCGAGCGGATCTGGGACCAGGTCTGCGCCTGGATCGATCAGGGCGATGCCGTGATGGTATGGGCCGCGCCGACCGATCAGGGCTTTGACTTCGCCACAGTGGGGACGAACCGGCGAATGCCGGTGGACTACGACGGACTGAAGCTGGTTCGCTTTCTTCCGGCAGATCACCCGAGTCTCGCAAACTCCGCCCCTCGCGGGAAGCGGTAGACCCTTCGCCGATCGGTCTCGACGCGATGCGCGCAACAGCGCGCGTTTGTCGGTCGCGGCGCGGGCCCGCCGCCTCGGGGCCCGCGAACCGGCCGGATCCCCGGTAAGCTCTTTGACAACGGAATAGGCCCGGTAGTACAAGCGTTTGCAGGAAGA # Right flank : CAGTCAACATCATCCAGCGGACCCCTTGGTCCGCGGGTACTGTACCGTGATGTCTGGAAATTCGCTTTGGGCTGGGGCCTTGAGCCCCTGCTGGGGCATGCCCCAGCAGGGGCTGCCCATCCTGGTATTCCATGGAGTTGCCGAACGACCATGGAGAAGCGCGAATGGACAGACGGAAGGATACGGCGGTTGAGGCGGTCTTGGAACAGCTGATCGAGCACGGCCCTGGCGAGATCGCCTCGGTGTTCGCCCGGGCCTTTGAGCTGGCGATGCAGATCGAGCGCGAACGATTTCTCGGTGCGGCGCACTACGAGCGTACGCCCGACCGCCGGGGCTATGCCAACGGCTACAAAGCCAAGCGGATCGACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 75581-75122 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOHL01000002.1 Oceanicella actignis strain DSM 24423, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ================================== ================== 75580 38 100.0 34 ...................................... TTGGCTTTTGTATTCAGACGGCGCACAATAAGTG 75508 38 100.0 32 ...................................... AATCTCCCGGTGGTCAAACAACGCCGTGTAGA 75438 38 100.0 31 ...................................... GGCTGCTCTGAGAGCATTCGAGGGACGATGA 75369 38 100.0 32 ...................................... CGATGCGATGAAGGCCTCGGCAGCAATGGTTT 75299 38 97.4 33 .....................................T GGCGAGAATGTCAGCTTTACCGATCGACGCTTT 75228 38 100.0 31 ...................................... GCTCAAAGCGCCGGATCAGGGCGTCGATGGA 75159 38 92.1 0 ...............................C.G...G | ========== ====== ====== ====== ====================================== ================================== ================== 7 38 98.5 32 GTCGAAAGACATGCCCCGCTTCCAAGGGGATTAAGACC # Left flank : CGCCTGCCCGCGCCGGTGGCGCGCCGTGCATGGGCTGGCCTCGGATCACGGCCATCGTCTGCAGTATTCCTTGTGGTGGCTGCCGCTTTCGCGGCTCGAGATGGACCGGCTCTGGCGCGACCTTGCCAAGTGCATCGACCCCGCCGCGGATGACGTCCGCGCCTATCCCTTCCCGAACGACGCATGGTGCCGCCTGTGGGGCGCGCCGCCATGGGGCGACGGCGTGGTGGATCGGTTTTCGATGCGCTTCTCCGCCTCCTGGCGCGATCGGCCTTGAGAGCCTCGGCATGGCAAGCTAGGCTTGCGGCGTCGCGCCCGAAGGTCCGGCTTCGGGAACGGGCCGGAAAATCCTCCGCAGTTCGGCGCGAGCCGCTCTTTGAAAAATCTGGACTTTTTCCGCCGATGCGGACCTGTTTCCGTCTCAAGTCGCCAAGGCCGAGTTGCTTTTCGCAATTGGCCGGAAAAGCCCTTTGGCATCAATCGCTTGCCAAGGGGGGTCG # Right flank : CGACCAGCCTCGGGAACGCTTTTCGGTTGCGAAACGTCGACGACATGCCCTGTCGAAGCAGAATGCCGCGAGGCGAGCCGGGGCGACGCGCCCGGTCCGGCGCGGGGCGCGACACGCCTGGGTCCTTCCTGGCCCCATGCCCGCCAAGAAAGGAACCGCCGGCAGGGCCGGGCGCGAAGTCGCGATCGCGCCGCTTCGGCAAGCGGCGCGAACGACGCCTGGCCGAAGCGGCGCGATCGCCGCCGAACGGACCGACCGCGACCGGATCAGACCGCCGTCGCGGCCGCCATGCGCATCAGGTTGGGGTGGAACGAGGGCGAATCCAGCGACATCCAGACGTGATGGTCCGGCAGCCCCTGGAAGCGGCGCAGGAACATTTCGACCAGAGCCGCGAAATCCTCGTTGCCGCTCGCGGCGGGCTCGGCGCCGTGGAACGTCTGGGGCGGGAAGGCGCGCCGCGCCAGGGCGTAGAGCTCGGCCGCGCCTTCGAGGAACGGCGT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAGACATGCCCCGCTTCCAAGGGGATTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //