Array 1 204752-202571 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXEG010000007.1 Bifidobacterium pseudocatenulatum strain YIT12986 YIT12986_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 204751 33 100.0 33 ................................. CTGAGCGTCGATGGTTACAACGGCCACGAGGTC 204685 33 100.0 34 ................................. ACGTCACCGCCAAGGGTAAGCGCCGAAGCCAACT 204618 33 100.0 34 ................................. CGGCCGCGTTGGACAATCCACAGTTCGTGCCGTA 204551 33 100.0 35 ................................. ATGTCACGTGAGGTCAAGGCCAAGGTCCACGGTGG 204483 33 100.0 33 ................................. ACTGATATTGATGATTTTTATATGCTGGATATT 204417 33 100.0 37 ................................. CACATTAAGGGCGGCGATCACCTGTGGCGTGGCGAAA 204347 33 100.0 34 ................................. TGAAAAAGCATCACAGGGGCAACCGTCAGACTCG 204280 33 100.0 34 ................................. GTATTGTTGGTATTAAGCGTCGTGGATTGAATAT 204213 33 100.0 35 ................................. GGATTGACATAGGTTGCTAGGGCTTCCACCTTGAT 204145 33 100.0 34 ................................. ATTGTGAGGTGTGTTTGATGGATATTAGTTCGAT 204078 33 100.0 37 ................................. AGGAAATCGCGGTCAAGTGGATTAAGGCGCACGGATA 204008 33 100.0 36 ................................. ACCACCGACGCCGGCACAAGCATTAACGTAGTCACG 203939 33 100.0 34 ................................. GTTGACGATCAAGCACGCTTGCATGTCCAGCGCG 203872 33 100.0 35 ................................. TATAGCGCACGTCGTACACTCCCTCCCCCACAATG 203804 33 100.0 34 ................................. GCGAATGATCAGGTCTGCGCTCGGTATCTGCTCA 203737 33 100.0 34 ................................. TCGTATCGGGCTGCGATTTTCCACTTGCCCAGCT 203670 33 100.0 34 ................................. GTCAAGCTTTTCGGCATTCTGAAGCGCAGAGTAG 203603 33 100.0 33 ................................. CAAATCCAAGACATGAGATTAAGACTCGAGCTC 203537 33 100.0 34 ................................. GTCATGGAGAAGTTCAGGCCATTGGTGGCGAAGG 203470 33 100.0 34 ................................. CGTCTGAGGGGTAATGAAAAAGGCCGGTGAAAAA 203403 33 100.0 33 ................................. AAATGGGCATCAGACAACAGACGATTGACGATT 203337 33 100.0 32 ................................. GCCGACGCCGGCGAGAAGGCCGGCAGCAACGA 203272 33 100.0 36 ................................. TCGTCTTGCCGCTCCCTCATGGCGGATGGAAGGCCG 203203 33 100.0 34 ................................. ATGAGATTTTGGGCGGTGAGCTTGTTGGTTTCGG 203136 33 100.0 33 ................................. ACCTCCCAGGCGCTCTACAGTGACCACCCGGAG 203070 33 100.0 33 ................................. GGGTTGCAACTGTTTGGACGCCTTGTTGTCGGA 203004 33 100.0 33 ................................. CTGCCATCGTTGGTCAAATCGGCGATAACCGTG 202938 33 100.0 35 ................................. ATATGCAAAATGGACGCCAAACACCCGATTCAAGC 202870 33 100.0 34 ................................. GAACGGTGGATGGAGGAGCACAGGACCGCCGTCA 202803 33 100.0 34 ................................. CTGAGCCTATCGTGTTAAGCTGTGCCATCTGATT 202736 33 100.0 33 ................................. AGCTGGGAGCAGTGCGTTCGCGCCGTACAAGGG 202670 33 100.0 34 ................................. GATACGATTAAGATGATTTTCGAGCGTCGTATCA 202603 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 33 33 100.0 34 GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Left flank : CAATACCGATGAGGACAGCCTGCGCTTTTATAAACTTGGCGCTCGATATGCGGATAGGATTGAGCATTATGGACGTGAACGGAGTTTGCCGGTTAATGATGTGATGATGATATAGCACAGGCAAAATGGCATGGTGCCATAACGATATGGTGTGGGGTATGCTGGGTTGAGCGTTTGAGTGTGCCGTCCGGTATTCAGAGTGTGTTTTCTAGCCAGCAGTATTGTGTTTTCGGCAAGGTGGCCGGTCTTGGAATGGTGTTTGTGCGAAGTGTAAGCGCTCATGATAAGGGACGTCTTTCGCACCTGAAAAACTATCGAAATCCGAATTGTGATTTTCGTGGGGCGTTTTGAAAACTAAATAATGGACATTAAAATGAGACAGAAAGCCAGTTGCTCGTTTTAGACATGTTGTTCGTCGTATCGGCGGTGTTGTTTGATATGCTTAAAGCTAGGCAGCTGGCTTGCGTCTCAAAAAGCGGACAAAAATGTCCAGCTGCACT # Right flank : CGGTGTCTGCAGCGTTCCGGCCACCGCGTGGATGTCGCTCTCTCTGTTTATGTCCAGTGTTCCCCGCACATGCGGGGATGATTCCGCATGTGCGGGACTGTTGGTAACGGAAAACCTGGGTTTTTGTCCGCTCGGGGCGACTTCAACGGTAATACGAGCAGGAACTGCGACTGGGTGTTTCGCATGGGGTCGCTTCTGAAAGCTATGTAAAAGAAATAGTGTATGTGAAAACGGTCGGGTGGGTGCGGATGCACGAGAAATTGGCTAACCTGTCGAATTTCTGTTTTACTTTGGTCGTTCATCTCGTGAGTGGTCGTCAAGCTAGACATATTGTGTCCCATGGGATGCAACATGTCATATGGAAATACATATGACTGGCGAATATCGCCAATGGTTCAGCCGGATAAAGGAGCGGAACGCAAAAGCCCGAATCAGCGCGAGACTCCGATTGCGCTTCTAGATGGGGCGGCCGGTGGGTGACCTGCATACGGTTGGTGACG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //