Array 1 3240897-3243137 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP028339.1 Thauera aromatica K172 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 3240897 30 100.0 37 .............................. GCGTACTGCTCGATGCGCTTCACGCGGGCGCCCTCGT 3240964 30 100.0 36 .............................. CCTCTTGCTCCGACAGCGTAACGTCCGGGAATGCGT 3241030 30 100.0 38 .............................. CCGATCAGGTCGAGCGTGCGCTCGCGCGGATACAGGGT 3241098 30 100.0 37 .............................. AGCCCGGATGCCTTCATGTCGTCGGCCAGTGCCACGT 3241165 30 100.0 37 .............................. CGTGCTTGGGGAAGTGGTTGAGATAGACGTTCAGGGT 3241232 30 100.0 37 .............................. ATGCGTAGGCCTCGGTCTGCATTGCGCGCCCGCCTGT 3241299 30 100.0 38 .............................. CGCGACGGGCAGCAGGTTGCCGGCGTCGAAGGCGACGT 3241367 30 100.0 41 .............................. AAAAAGAAGGTCGAGACAGGATTGCGCACCAGGTAATCGGT 3241438 30 100.0 39 .............................. ACGTACATGCGCTGCTCGGGCTGGGCCGTGGCGGCGAGT 3241507 30 100.0 38 .............................. CTTGATGGCGCCCTCGAGGTTCCGCGACCAACCCTCGT 3241575 30 100.0 37 .............................. AATATTGAACCTGTCGGTTTTGGTGAGTATTTCGGGT 3241642 30 100.0 37 .............................. GCCGGCGGCGATCGGTTCGACCCGGTCGAGCTCGGGT 3241709 30 100.0 36 .............................. CTCGAAAACGCAGTGGAAGTACCCAAAGGACGTCGT 3241775 30 100.0 40 .............................. ACACCGGATGCCATGTCGATATGCTCGCAGTTCCCCGGGT 3241845 30 100.0 38 .............................. GCCCGCCCCGCAACATCCACCTTCCCGACCCCGCGTGT 3241913 30 100.0 36 .............................. GTGTTTTGACGATTGGAATTATTCCGATGGTTCCGT 3241979 30 100.0 36 .............................. CAGTTTGACCTGAAAGACGAGGATGGAGAAGTGCGT 3242045 30 100.0 36 .............................. GGCGAGCTGGGCGCGGACATGCCGGCCACCGAGGGT 3242111 30 100.0 36 .............................. TCCTGTAAACCCTCACCTATTGGCGCCCTCTCGAGT 3242177 30 100.0 35 .............................. ACGACGGCTACGTGCAGTTTGAACTGCGCTCCAGT 3242242 30 100.0 37 .............................. CGGCGGAGGCGGCCTGATGCTCTGCGCGGAAGTCGGT 3242309 30 100.0 40 .............................. GTTCCAACCCGGCCGCCGGTTGTTTGCCGACGACGGGCGT 3242379 30 100.0 36 .............................. CGCGTTGTCCGTTGCGACATAGTCAGGCTGATGCGT 3242445 30 100.0 36 .............................. TTGACCGCGACGTTGCCCACGCTGGCGCTCGATTGT 3242511 30 100.0 35 .............................. TCCAGCGGCTGGTCGAAGGTCAATCGCCGTGTGGT 3242576 30 100.0 39 .............................. CAGCAATTCATCCTCGACCTCGAAAAGTCCATCGCGTGT 3242645 30 100.0 37 .............................. ATCCGGGGCGTGGCTCTCCCCCCTCACCTCCCCGGGT 3242712 30 100.0 36 .............................. TCGGTTCGGTTGGGCTCATGCGGCTGGCTCATCGGT 3242778 30 100.0 38 .............................. TTCGTGATGACGGCCATGACCTTCTGCCCGTCGAGGGT 3242846 30 100.0 37 .............................. GTTGGTCACCTCGATCAGGTGGGCGATGATGTCGAGT 3242913 30 100.0 36 .............................. GTACATCAGAGGCAGCGATGCGCTGATGTCGTACGT 3242979 30 100.0 37 .............................. TCTGCAACGTAGGTTTGCCAGGCCGTACAGGCCACGT 3243046 30 100.0 32 .............................. GAGCCCACCGACCCGCAGTACCAGCGCACTGA 3243108 30 73.3 0 AT..T.....G.T.T....C.....A.... | ========== ====== ====== ====== ============================== ========================================= ================== 34 30 99.2 37 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : TAGGGCGCAGACATGATGGTGCTGGTAAGTTACGACGTCAGCACCCGGGAGACGGGTGGAGACCGGCGCCTACGCCGGGTGGCCAAAGCATGCCGAGACTATGGCCAGCGGGTGCAATACTCGGTGTTCGAGATCGAGGTCGATCCAGCTCAGTGGGTCATGCTGAAGCAAAGGCTGATCGACCTGATCGACCCTGTTCAGGACAGCCTGCGTTTCTACTATCTCGGCAAGCACTGGCAAGCTCGGATCGAGCACATCGGCGCCAAGGCTGTACTCGATCTCAACAGCCCACTGATCTTATGACCGATCCAAGATGTCAAGTGCGAACCTGAAGCTCCGTGCAAATTCCCAGCCCATTCGCGCTTGTCTTATGAGTTTGATCTAGAACGGTTTCCACTGTGATATCGAGTTTGTAGAAGATGTGCTGAGACCCATTTATGGGTAGCTCGCCGAAATAGCCAGAATTACGCTATAAATTCAGCATGTTACATTGACGCGGT # Right flank : CTTGCTCGGGTACACGACATCACCACCGTCGTTGCTGTCAGCCACCTTGTTGTCGTCTCTGCCAACCTATCCCATCTGCACGCTGGGACCGTTTTCCATCCCCCGCCAATGCACGACTTCGAGGCGGCCGTCGAAGTGTTCGACGACCGCGCTGCACGAGTCGACCCAGTCGCCGCAGTTCAGGTAGCGGACCTTGCCGATCCGGCGGTCGGAGGCCCAGTGGATGTGGCCGCAGATCACCCCATCCACGCCACGCAACTGGGCGGCGTGCGCCATGCTGTCCTCGAAGTCGAAGATGAAGCCCACCGCCTTTTTCACTTTCTGCTTCGCGTACCCGGCCAGCGACCAGTAGCCCGGCATGTGCAGCAGCCGGCGTGCCCGCGACAGCAGATGGTTGAGCCGGACCAGGGCGTTGTAGGCGACATCGCCGAGCACCGCCACCCAGCGGTGGTGACGCGTGACCTGGTCGTATTCGTCACCGTGGATCAGCCAGTAGCGAC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //