Array 1 39682-38387 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JQKO01000018.1 Methylocapsa aurea strain KYG DL86DRAFT_scaffold00016.16_C, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
     39681	    32	 100.0	    33	................................	AGATCCTTCAGAATAAAATACTCGGCGTGTTTC    	
     39616	    32	 100.0	    33	................................	GAAGCAGAAATTCGCTGTCAGCGTCTCGATCGA    	
     39551	    32	 100.0	    33	................................	TGAATCGTTGACGCGGTTCCTTTACCAGCCCCA    	
     39486	    32	 100.0	    34	................................	TGAACGAACACCGAGGCCATTGCATCGGGGTCGC   	
     39420	    32	 100.0	    34	................................	AAGATCATAGGGGAAGTCGAGAAGCTCGTAGCTG   	
     39354	    32	 100.0	    34	................................	AGAAACGCCCCCTTCATGGCGGACTACCGAGAAT   	
     39288	    32	 100.0	    35	................................	CATGCCATCCGACGAGGAGTCGCCTAGATTGGGTC  	
     39221	    32	 100.0	    36	................................	CGGATGCGAACAGGCGTCCCTTATGGACAATCCCGC 	
     39153	    32	 100.0	    35	................................	CCCGAACAAGCGTTCCGCGCGCCCTGAGAGACATG  	
     39086	    32	 100.0	    34	................................	AAAAATGACATTCCGCCTGGACCGGCCGCCGGCG   	
     39020	    32	 100.0	    34	................................	GACAGGGGCTCATGCAGGGCTTCGTTCGAATGAA   	
     38954	    32	 100.0	    34	................................	ACGCAGGCTGGAGCCTTCGCAAGCGGAGCGCTGG   	
     38888	    32	 100.0	    36	................................	ATTCAACGGCACGACTTGCGCCGCTATCTTTTGGGT 	
     38820	    32	 100.0	    34	................................	CCCAAAGGCTCCAACATGACGCGGCGGGCCTTGT   	
     38754	    32	 100.0	    36	................................	ATCGCAACTGCCGCCGGCGCAGCGATGACCAAGGTC 	
     38686	    32	 100.0	    34	................................	ACCCGGCCATAGGCGCGCACGCGGGCCGGCGACG   	
     38620	    32	 100.0	    34	................................	ATCAATACCTGGAACCGATCGGCGACCGAGGGGC   	
     38554	    32	 100.0	    35	................................	TGCTAACCGGCCCGTGTGTTGTGACACGTGGTAGC  	
     38487	    32	 100.0	    37	................................	GAGGCGGTCGCGACAACGGATGCCGCGAAATCGGTCA	
     38418	    32	  96.9	     0	...............................G	|                                    	
==========	======	======	======	================================	=====================================	==================
        20	    32	  99.8	    35	GTCGCCCCCCACGCGGGGGCGTGGATTGGAAC	                                     	       

# Left flank :   GCCGGCGGTGGATTTCGATGCGCCGATGATCGTATGATTTGATAGAGCATTTTCGGGCGAAGTGGACATCGGTTCGCGTTAAGAAAATGCGACAAAACGAAGATCTAGAGCTGCTGTCTGATTCCGTCGAAACCGAAAGCGCTCTAGTCTGAAGGTCCATTCGGAGTTTCGTGTGCCGCGCATTTTTGAAAATCGCGCGTCGCCGAGACTTTTCCAGAAATTTCGATTCCGGTCCGGATCCACGTTTGCAGGAACCAAGTGCTGTGGAACAATCTGCATCTTGGTTCTTTCGTGGGCTGCCGGAGTTTCGATGCGGGGTTTGCTCGCGCGAACCCCAAGCGACCGGCTGGACGCCGACCGGTCCGCGGAGCCAAAAGCCCTTTGTGATCAAGGAGCCGAAGTTTCCAGTCCGAAGGATGTCCGTTTTGCGGCGCTCGCTTGCAACTGTTCGCGCGCTGCTGAGGGTTTCGCTTGTTCGATCAGTACTCTATCCTGCCGCA
# Right flank :  GTGCATACCGTGCTCATCGAACCTTTCGAGGCCGCGGATCGCGTGAGATGCGGGATCGTGGCTTGCAAGGCACAGAGGCAACCATCGAGCGGCAGCAGCGTATGCTTGCGGAAAGCGACGACGATCGCCTCGTCTTCAAGGGAAAGCGAAGTTGACTTCGGCTCTTTCGGGCCGGTCGGCCGGTCGGCGACAGAGCCGCGCTTCTTCCACTTGGCGACGGTCTTCTGATTGACCCCGTAGCGCTTGGCGAGCGCTCTCAGGCTCTCTTGACTATTTTGTATCGCTCGACGGACCGCCTCTGTCGTCGTGGCGCAGCCGTGCAGAACTTGTCCCATAGCGCATCCCTCCACTCTCGCGACAAGAATGCACCATCAAAACCCGGGATCAAACACCTAGGCTTAGGAGCCATAAACTGAACGAAAAACTCGGATGACGACTTCGAGCCGGACCTCAATCAGCCGGCCGGTGGCTTGTTCACCGCCAATTGCGCCTCAAAGGCG

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCCCACGCGGGGGCGTGGATTGGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.50,-11.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//