Array 1 1485973-1484492 **** Predicted by CRISPRDetect 2.4 *** >NZ_ARWI01000001.1 Thiomicrorhabdus sp. Kp2 A379DRAFT_chromosome1.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1485972 32 100.0 34 ................................ AGTTTATAGGTGATGCAACGGTTAGCCAGTGGAA 1485906 32 100.0 34 ................................ TTACACTAACTGTACGGAATGAAATAATAATGAA 1485840 32 100.0 34 ................................ CCATCCCTGTAAATCTACGTTGTAGAATGTTAGA 1485774 32 100.0 34 ................................ TTATAACGAATGAATTAGACATTTGATTTTCTCC 1485708 32 100.0 33 ................................ TCGCTCTTGTTGTCTTGGTGGTGGTGTGTATGA 1485643 32 100.0 33 ................................ TTAAATCAAAGCAAGATGTCACGATTCATTCAC 1485578 32 100.0 34 ................................ TGCAAATTTGGGTTATCCTCGCTTGCATTTGGAG 1485512 32 100.0 33 ................................ ATAGCTTGCTCTGCTTGTTCTAGCGTTAAGCCT 1485447 32 100.0 35 ................................ TAAAACCTGCTCATATAACTCATTACTAACAGGAA 1485380 32 100.0 34 ................................ AGGCTCCAAAGCTTTGTATTGCTCTGGCGTAAGC 1485314 32 100.0 35 ................................ TCGTAATAAATCATCGTGCCAAACGCTTGCCTGTA 1485247 32 100.0 34 ................................ ATCAACTTCATTGGCTGGATGAATAAGTATTAAG 1485181 32 100.0 35 ................................ ACTTGAGTTAATCGGTAATTTGTGCCCGTTAGATA 1485114 32 100.0 35 ................................ CTGCTTCTTGTTGTTCGTCTGGCATAAATTGAGCG 1485047 32 100.0 33 ................................ AATTACATCATCCCAGACAGGGTCTAGACCTGT 1484982 32 100.0 34 ................................ GACTAAAACACCGCTATTTATTAATGATGCATTA 1484916 32 100.0 34 ................................ CATTTACCGTGGTATCACCGTTAATTGTGGTTTT 1484850 32 100.0 33 ................................ TAGTCTAAAGGCGGGCAGGGGTAGGTCTCCTGT 1484785 32 100.0 34 ................................ ACAGGTTTTAGAGAGTGTTGAAAAAAGCGGCTGG 1484719 32 100.0 33 ................................ ACGCAAGAATGTTTTTTGACCTGATTCAAAATA 1484654 32 100.0 33 ................................ AAGCATTAACCGAAAATCAAAGCGCGCTTGCTT 1484589 32 100.0 34 ................................ AAGCAGCATGAGAAGCAAGAAACAGGCGATTACA 1484523 32 96.9 0 ...............................T | ========== ====== ====== ====== ================================ =================================== ================== 23 32 99.9 34 GTCGCACCCATCACGGGTGCGTGGATTGAAAC # Left flank : AAAAAACGCCAAAAGGAACTTAATGATGAAAATGACAAGCCTAAGTGATTTCAAAAAAGAGTTATTACAACAGGATGATTTCAAAAATGAATATGATGCGCTTGAAGAGGAGTTTCAATTTATTCGTGTATTAATAGATATGAGAGAAAAATCGGGTCTTACTCAAGAAGAAATAGCCAAAAAAATGGGTACACAAAAAAGCAATATTAGTCGGTTAGAAAAAGGAACCAGCAATCCTGGTTGGAAAACCCTAAAAAAATATGCCCATGCGTGTGGGTTTAAAATTCAATTACAATATTCATAAAATGAATACAATTACAGTGAATCGCTAACCATTAGTGCTCTTTAAAAACATGGAACCTTAGCGATTGACGAAGCCAATGAATAATCAACCTCCTTAAAAACCAAATTAAATTAATTTATAATTTACAAGTCTATTTATGAACCTTAGCGAATTCCCACCTAAACTACCTTAGTTTGCTGAGTTTGATTAATAGGCA # Right flank : ATTACCTACCGCACAGGCTGTGTATTGCAGTCCAAAAACCACCGTCTACGAGTGTTAAATTTTCCACTTAATTAATTCTTAAATGAAGCATCTTCTTTAAGAGTTTCAATATTTGATAGCTTTTAAGTAGCCTGTAGGCTACAATTTACACATGAAATACAAAATCCTAACAACCAGCACTTTTGATAAATGGCTTTCTAAACAAAAAGACCGACAAGCTGTAAGAGCCATCGCCATGCGAATTGCAAGAGCAGAACAAGGGAATTTTGGAGATTCTGAGCCTGTTGGAGAGGGAGTTAGTGAAATGCGTATTTTCATAGGAAAAGGCTATCGAATTTATTACACCGTTCGTGGTGAAACTGTTTTATTACTTTTGAACGGTGGTATCAAAAGTAATAAAAAGCAGCAACAAGAAGATATAGCCAAAGCAAAACAAATCTTGCAAAAAATTGGAGAGTAGCTCATGGCAGAAAAAATAAAAGCATTTAATCCATTTGATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //