Array 1 77811-78253 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CURX01000003.1 Campylobacter jejuni strain OXC6455, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	====================================	=========================================	==================
     77811	    36	  97.2	    30	A...................................	GCTTTAGGAAATGCTTTAAAACGCTTTGGA           	
     77877	    36	 100.0	    41	....................................	TTCACTTACTCCATTACCTCTTCTAGCAATGCTGTAGCACT	
     77954	    36	 100.0	    30	....................................	TGAAAAATTAACACAATTTGATGGAGTTTA           	
     78020	    36	 100.0	    30	....................................	AAGTCAATTTAATAACGATTTTAATTTAGA           	
     78086	    36	 100.0	    30	....................................	TTTAGCCTTCTCACATATTTTATTTAATTC           	
     78152	    36	 100.0	    30	....................................	TGATTGAAGTGTAGTAAAGGCTGTAGCACT           	
     78218	    36	 100.0	     0	....................................	|                                        	
==========	======	======	======	====================================	=========================================	==================
         7	    36	  99.6	    32	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	                                         	       

# Left flank :   ATAAAACCAGGCAGACATATCAAAATAGCTAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACGCAAGAGAGATTTTAAGCTCTTGGTTACTTCAGCCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGCTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGTAATGTGGAATTTAAAAATGGACGCATTTTAGCTAATCTTGAAGGTAAAAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTGGTGCCAAAAGAATGTGAAATTTTAGAAAATGAGAGCTTAGTGGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTCGCAACCTCCTTTTAGTGAAGTAATTAGCCCTAGCGGAGTTTCAATCCACTAGGGTTT
# Right flank :  TAGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTATTTGAATTTCTTCATTATTTGAATTTTTATATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTGGTTTCGTTATTAACTTTTTCGTTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAATTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACACTAAATTGCAGCATAAAATAACCTAATTTTATAAGATTATTTCTAAATTTACCT

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:78.38%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [2-2] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.27   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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