Array 1 2147174-2145285 **** Predicted by CRISPRDetect 2.4 *** >NC_021723.1 Lacticaseibacillus rhamnosus LOCK900, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 2147173 36 100.0 31 .................................... TTTAGAATACGATTATAAGACAGTAGTTTGG 2147106 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 2147040 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 2146974 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 2146908 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 2146842 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 2146776 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 2146710 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 2146644 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 2146578 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 2146512 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 2146446 36 100.0 30 .................................... CTCGTGACTTGTCGTGATATGCATACGCGC 2146380 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 2146314 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 2146246 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 2146180 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 2146114 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 2146048 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 2145982 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 2145916 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 2145850 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 2145784 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 2145718 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 2145652 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 2145586 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 2145520 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 2145454 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 2145388 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 2145322 36 86.1 0 .......................AA.C....G...G | T,C [2145288,2145294] ========== ====== ====== ====== ==================================== ================================ ================== 29 36 99.5 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //