Array 1 40753-40275 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTOY01000004.1 Selenomonas sp. mPRGC5 4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 40752 38 89.5 37 AC..T................................T TGCAAGACATTTTATGATTACCCAAAAATGCGCATTG T,T [40744,40746] 40675 38 100.0 35 ...................................... CATGGCTGCCTTGGAATGCTATTGCCTCTTATATC 40602 38 100.0 36 ...................................... ACGGGCGATGTCAAGAAAGCATTCAAGGCATAAGTA 40528 38 100.0 32 ...................................... TTGCAACTTGCTTCCGAAGAACGTATTTGGGA 40458 38 100.0 36 ...................................... AAGGCGCAGAAGCTGGTGGCATTGGTGGTATGACTA 40384 38 97.4 34 .....................................C GATCCATATGCTCAGCACACGCAATACTGTAATC 40312 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ===================================== ================== 7 38 98.1 35 GTTACGATACCGCAAGCGGTAGTAGGGTGCTAGCAACA # Left flank : AAAATAGGAATGTCATTTTCCAGGCACGCAAAAATAACCGGTGTGGAAATATTGGCTGCCGGTCCGACAACAACGGATGTCAGCGAGCGGATAGGCATACGCCCCACCAGTTTTTCATCTTTTTCAATTACCAGCCGGCCGCCATTTTTGTGTACATTTCCTCCAGGGGAAAGCAAATACAATACACTCATATCATCATCCCCTAAACGATAATGACGTTACGGTCTTCTTCCAACGGTTTGCCATGCATCAGGATATCGCTATCACAAGCTTTGCAGACCGGGATAATCAGCAGCAGAGGATTCTTGGCATCTTCGGTTATCCGCAACAGTTCCTGCCAGATATTTTTGATTTCTTTATTGTTGCATTTGCAGGAAAACACACTGAACTGAATACGGAAGGCACGATCTTCCAGATACTTGACGATTCGGCTGCGAATACGATCCTCTTTGATATCATAGCATATTATGTATTTCATAACGGATTCTCAAAACAAATGA # Right flank : GTTACGTTTGGGAGCCGCATGGCTCTAAGCCTCCCAACCTCATTTTTGAAAACCTTCGCCATTTTTGGGCAAAATCCTGCTGGCTGTGAAATTTTTTGTTTCGAAAATGCATGATTTTTACCTCCTGGTCCTTGCCTCATAAGGCTTCAGCTTGTCCACGAAAAAAACTGAAAACCTCAACGGTAGAATGCGGCTTGCGAGGGTGTGGTGGAGGTTTTCAGTTTTTCATCGTCTGATTACCAACATCCATAAAGCGCAGCCTATGACTCGATTATAACATATTTTCAATTTTTTTTGCGAAAATGCCAAAAAAAGCAATTAGGGGAAGTTATAGATAACAAGAGAGAAAACAACAGTCTAAGTAACAGGAGGTGGATTCCATGGATAATCAAACCTATGGTTGGGCAGATTGAATTTGATTTACAGAAAGGATGCGCTTATCATGACCAATAAAAATTTTTTCCCGATAGTACCACCTATTCCCTTCCCATTTCCGAAAC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACGATACCGCAAGCGGTAGTAGGGTGCTAGCAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,1.01 Confidence: MEDIUM] # Array family : NA // Array 2 50989-49521 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTOY01000004.1 Selenomonas sp. mPRGC5 4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 50988 28 100.0 32 ............................ GCAAAGAGTTTGGATGAGCCGAAGCGGAGATT 50928 28 100.0 32 ............................ TTCACTATTGTATGGGTAGGAAGTCAGTGACA 50868 28 100.0 32 ............................ AACGACTGGCCCGCCGACCTCTTCCTATCCAT 50808 28 100.0 32 ............................ TTGGTATGAGGCTTTCATGGAGTCTGATGGCA 50748 28 100.0 32 ............................ TTGACCCGCAGCAGAATATGAGCCAAGCGGCC 50688 28 100.0 32 ............................ ACCCTTCGGCGTAGCCCTCGCCGTAGCTTACA 50628 28 100.0 32 ............................ TTCTTTCGGACTGTTCTTGTAAGGATTCCTGT 50568 28 100.0 32 ............................ GCGCTGGCGAATAACCATTGCGTATACTCCTT 50508 28 100.0 32 ............................ GTAGAGGTTATGGCTTTGCAGTAGCTTTACCG 50448 28 100.0 32 ............................ AGACCGCAGAGGCGGCAAAATTGGCAACCGTG 50388 28 100.0 32 ............................ CTGTTGCGTGACGGTTCCCACGGTTGCCAATT 50328 28 100.0 32 ............................ TTCGATGCGTTTGCGCCCTGTTGCGTGACGGT 50268 28 100.0 32 ............................ TGTCCCTCGATGCGTTTGCGTCCCGTGGCGTG 50208 28 100.0 32 ............................ TCGTGGCGTCTGGTGGCGTGCCTAGAGAATCT 50148 28 100.0 32 ............................ AGTCAGTAAATATCGATGCGCTTTTTCGTGGT 50088 28 100.0 32 ............................ ATATACGAGGGCGCAGATGATGCAGACAAGGG 50028 28 100.0 32 ............................ TAAAATCCGATGGCACGCCAGACCGCAGAGGC 49968 28 100.0 32 ............................ CACCGGGAAACGCGATTCATATTCCGTTCGTC 49908 28 100.0 32 ............................ TTGCCACCGACATTCGTGTCGGTCGCACGCTC 49848 28 100.0 32 ............................ ACCAGTTGCAGATTGACCGTCATGAGAAGCTA 49788 28 100.0 32 ............................ TTCTTATAGTATCACTACTAATACCTTTGATT 49728 28 100.0 32 ............................ ACTTGCAATATTTTATGCACGTAAGCACTATC 49668 28 100.0 32 ............................ GTCTTAACGAGTCCAAACGTTGATGATGTTGC 49608 28 100.0 32 ............................ GCGGAACCAAGAGACATATGGGGCAAACGACG 49548 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 25 28 100.0 32 GTACTCCGCCGTATAGGCGGCTTAGAAA # Left flank : GAGAAAGAATTGGCCAAAATGGATATAAAAAGGTGGTTGCGACGCTATCAAGATTATGTCCATGTAACACAGATTCGTCTGGTACCAAACAGATTGCGGGGGTATGCAATATATCGGCGGTATCATCCAAAGGCTAATTATTCTCAGAAAGCAAGGAGATATGCAAAAAGGCATAGCATTGACTATGATGAGGCAATAAAGCTCTTTCCGATGGAGAACAAAAAAATTGACTTGCCTTATGTACAAATGAGTAGTGAAACTAATAGTCAAAAGTTTAGGCTTTATGTGGAGAAGGTCCTGTGTAATAGTGAAGTAGATAAAGGCTTTGGAAGTTATGGCTTGGATAATAAATCTACAGTACCAGAGTTTTGACCCAAAATTTTTACGATGGCTTGAGCCCTTGATTTTAAAGGGGGATTGTAATAAGGCAAAAAAAGGGTAAAATTGGAATAAAGGTAAAGTATGCTTTGTTTAAAAGGGAAGGACGAAGTTTTATTACA # Right flank : GATGTTTATAATATATGTTAATGTATTATTAATCTAATGATTGAATACTTATTATAATTTTTGTAACTGATGGTGATAGGAAATGCACGAATTAAACTGGCAGCATTTTTCAGCAGGCGATTTTGCGGATTTGCAGGCACGGTTGCGAGCGTCTTGGCAGGAGATTTTGCCAGGTGGGGAGTATTATGGGCAGATTCGTATTTGTGATGTTTGCTATGATATTCAGGCCGAATGGCTGGATTGCGAGGCGTATGAAGACATCTTTGTGACGATGAGTCCGTTTTTTCCGCATGATGAAGACTCTGCGGAGGAACCCTATCAGGAAATGGTGGCGGGGATGCCGTTTGATACGGCAGATGATGCGAGCATCGTTTATGCGAAAGAAGATTTCCTGGCGTTCAGCTATCTGCGTTTTTGCGACGATGCCACGCAAAAAATCCAGCAGATGCTGCAAAAGGATGTATTTGCCAAGGCGTTGGCACAGGATACGAATTTTTGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTCCGCCGTATAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.74 Confidence: MEDIUM] # Array family : NA //