Array 1 258600-260941 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSNY01000008.1 Mesorhizobium composti strain CC-YTH430 contig08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 258600 36 100.0 30 .................................... CCCGGCCTAAGTCTGGAGAGCGCTCATCTC 258666 36 100.0 30 .................................... CCGGCGAGATCGCTACGTGGGACGTGCATG 258732 36 100.0 30 .................................... CTGCCTGCGTGACGCGCACTGCAACATCCT 258798 36 100.0 30 .................................... GACCGGGACGGAACCGCGTTCCCGCTGCTG 258864 36 100.0 30 .................................... GCTTTTGAACTTCGATCGCCTGCAAAGTCG 258930 36 100.0 30 .................................... GCTTTCGCTCGAGTTCACGTCACCCGGAAC 258996 36 100.0 30 .................................... GCCAGCCGTGCGGTTGCGACCGAAGACCTC 259062 36 100.0 30 .................................... CGTACATAAAGCAGCGTAAAGAGCATGGCG 259128 36 100.0 30 .................................... AATGATTATGAATTCAATGAGAACAGCGTC 259194 36 100.0 30 .................................... CGTCGCTTCCGACGTGAATAGTGCCAGGCA 259260 36 100.0 30 .................................... CACCAAGGCCACCGACACGCGCTTTTGGAA 259326 36 100.0 30 .................................... CGTCGAGGCCAAGCGCCGAAACGACGCAGC 259392 36 100.0 30 .................................... CATGGGCGGCGACGAAACCCGCATGAATGG 259458 36 100.0 30 .................................... TAAGTGAGTTTTCGAGAGCGGTTATGAACA 259524 36 100.0 30 .................................... CTTCTCGATCATCGCGAGACTTCATCGGGA 259590 36 100.0 30 .................................... GATAGCGGCCGGCTTCACACGCGAAAGCGA 259656 36 100.0 29 .................................... CACACGACGACGCCGATATCGCCATCCTG 259721 36 100.0 30 .................................... GTTCATGAGTTTGCCCTATACAGCGCCGCG 259787 36 100.0 30 .................................... GGCCCGGAAAGAGGCTGATCTGCCGAACTA 259853 36 100.0 30 .................................... TCGGGCTGAATTGGCAGCACTGCGCCCGGG 259919 36 100.0 29 .................................... AATCTCGTAAACGGCGCGGTGACCAGCCC 259984 36 100.0 29 .................................... GAATACGATGACTACGACTGGGTGTTCCA 260049 36 100.0 30 .................................... GTCGGCCAGCAGTTCGCACATGAGTGGAAT 260115 36 100.0 30 .................................... GGTCCCACTTCTTTGGCCTGAAAGAGGCGA 260181 36 100.0 30 .................................... AAGGACGTTCGCGTCCGATCTGCTGGAGGC 260247 36 100.0 30 .................................... TGACTAGATCATCTGCTCTTTTGCGATCTG 260313 36 100.0 30 .................................... ATTTCCAAGAAAGTCCCCGAACTCGGTCGA 260379 36 100.0 30 .................................... ATTGGTATTAGGAACGCGAACAAGCCGTGT 260445 36 100.0 30 .................................... CTTGAAAGATTTCTCCTTCGGTGCCGTTGG 260511 36 100.0 29 .................................... GTCGATCCGGTGTTGCTGGCGTACGACGA 260576 36 100.0 30 .................................... GTGGCATGGCAGCGAGTGCGTAGGGGCGGC 260642 36 100.0 30 .................................... GCAATCAGGACAACACACGGTGGGTTTGCA 260708 36 100.0 30 .................................... CTTGATGTTGAACGGCACGCGGCGCAGGCC 260774 36 100.0 30 .................................... AAACGAGTACATGAGCCGTAACGCAGATGA 260840 36 100.0 30 .................................... AGGGTAGATAAACGTCTTAAACAGCAGCGA 260906 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 36 36 100.0 30 GTTGCCGCTGGACCACGATCTCTGAACGGCTACACT # Left flank : GGCGGCCAGCGCCAGCGCATCTGCATTGCCCGTGCGCTCGCGCTCGACCCGCGTCTCGTCATCGCCGACGAGGCGGTCGCTTCGCTCGACGTGACCATCCAGGCGCAGGTCATCAACCTCTTGATGGACCTGCAGCGAGACATCGGCATCGCCATCCTTTTCATCAGCCACGACATGGCCGTCGTCGAGCGCATCGCGCACCGCGTCGCCGTCATGCATCTCGGAGAGATCGTTGAGATCGGCGACCGCCGCTCCGTCTTCGGCAATCCGCAGCATCCCTATACGCGCAAGTTGCTTTCGACGGTTCCGGTCGCCGACCCGACGAAGCGGCCGATCGGCCGTGAGCCGATGTCGGACGAGATTCCCAGCGCCGTGCGCGGGGTGGATTTCGTGCCGGTCCATCTGCCGATGAACGCGGTCTCGCCGACGCATTTCGTGCGGCAGACCGCGCCGTCCTGACGTCGCTGCGGGCGGCGACTGCTCAGCCGCGCCAGCGGCAG # Right flank : TACCTGAGCAGGTATCTTGTTGAAAACCAATGAGATACCTGCTTCAGCAGGTAGTGGAAAAGCGCTGCCAGCTTCAAAAAAGAGCAAGTTGGTCGGGGTTTTTTCTCGGCTTCCTGCGTCGCTGGCCCGAGAATCGGACGATGTTTTCATATTGCTTGTCCGTAAACGTAAGGACATGAACATCTCCACGGTCCGGCAGATGGTCCTCGATCCGCCGCATGTAAGTCTCGAACTGTTCCTTGCCGTTGCAGAACCGAGCATAGACTGAAAACTGACTCTTTTCGAAGCCCTGGTCGAGCAGGAACTGGCGAAATTTGGTGGCAGCCTTGCTTTGCGCCTTCGTCATTACCGGTAGGTCGAACATGACGAAAATCCACATCAGTCGATATCCACTGAGTTGAGTGGCGCTCACGTGACTACGGCTCCCAGCCCGGCGAGTTCGATCGCCGAGGGAGGGCGCGGCGGCGCAAGGTTGGACGCCTTGCCCGTCTCGAAGCTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCGCTGGACCACGATCTCTGAACGGCTACACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTGCCGCTGGACCGCGATCTCTGAACAGCTATGGT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.80,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //