Array 1 38037-39160 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXA01000010.1 Campylobacter curvus strain 17503 contig00010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 38037 30 100.0 35 .............................. AGGACATATTTTTACTTAAGTATCTGTTTTCCATA 38102 30 100.0 37 .............................. TCAATCGTCTTAAAACCCTGCGGATTTATCCGCCCTA 38169 30 100.0 37 .............................. TCATGAAAAACATGACTTAAATGATCCTGACGTTAAA 38236 30 100.0 33 .............................. GTAGTTTGCTCGGTATCTTGAATGAACAAAGAT 38299 30 100.0 36 .............................. ACGCTTTTGCTGCTCCTGCTCTTGATTATGATCTTG 38365 30 100.0 36 .............................. ACCTGACACTTCACGGGAATATACACATCTTGATAC 38431 30 100.0 37 .............................. CTCATCGGAAACGATAGCGTGTTGCCTGAACTTCGGG 38498 30 100.0 35 .............................. GTAAAAGGACAAAAATGACATACGGCGAAGCGGTA 38563 30 100.0 37 .............................. ATAAGAACCGAGCGATCGGCGTCCTTCAAAAAGCGCG 38630 30 100.0 34 .............................. TTTTAAAATACGCTAGCGTGATTAATGCAGAGGG 38694 30 100.0 35 .............................. GCGAAGCGTTGAGCGAAGTTAATCAGGTTTTAAAT 38759 30 100.0 37 .............................. TTCCGAACCTTTAAAGAGATCTAAAGCCATAGTTATT 38826 30 100.0 36 .............................. TTCTGTATTTTGGCTCTATCATTTTTCCTTCCTCCA 38892 30 100.0 36 .............................. CCGCCGCGGTTGGGTCGTTAGCGAAGCCGAAGTCTA 38958 30 90.0 139 ............C............T...T ATGGCCAATACCTAATTATTCCAAAAATTTAATACCTTGAAAACTGTATAAAAAATAAATAGCCCCTATTTCTAACCAACAAATACCAAATTTCTTTAGTCTATACTTGTTTGTAGTATAATTACGAGATATTTATTTG T,T [38980,38986] 39129 30 76.7 0 ...........AA.T.A..A.....T...G | T,T [39133,39137] ========== ====== ====== ====== ============================== =========================================================================================================================================== ================== 16 30 97.9 43 GTTAAAATTTATTCCGTTGGAATTTGAAAC # Left flank : ATCAGAGTTTGAGTTGCTAAAAACTGCACTACAAGGATAGGGAACGATAGCTAACTGCATTCTGTTCGCAGTTGCGTGGCGTTGCCAAAGCTTCTTAAACAAGGGAAACGCAACCAGTGCTCCCACGGTAACTCGAAGTAGAAAAATCGTGCTATATATTCGGCTATTCGCTCCCACATAAACACTGTTGCATCTGCGTTGCCCTTTGGAGCTAGTATCAATATTTGATTGTAGTAGAGCCTATTCTTTTACAAAAAACCCACTTGATTATCTTATAGGTAGGCTTGAATGCCAGTTTAATGCATTTACTTTGATTTAATTATTAGGGTATTTTATAACAAAAAGTTTTATAAAATGATGATAAAGCTTGTTCTAAGATTTTAATTATGCCCTATTTTATGAGTTTTCGCTTGCTAACAATTTTAAATTTTAACTATTTTTAAGATATAAAAATATAGACTTTTGCTTTTAATGGCTCTGAAATTTGATATTTTAGTGCT # Right flank : GTATCGAGAGCATATTATAAGTATAATTCAAAACAAATATTTTATGCCCCTTAGAAGATGACATTTATGTAAAACTTTTAAAGTTCAATAGCAAGCACTTCAAAAAATAAATTTCATCAAAATACTTAAAAGTTAAAGACTAGCCAAAAACCAGTCAATGTACTTTATGTTTTAGTTAATATATCTAAAATTACTACTAATGCCATATGATGAGCGTAGATCAAATAATGATATTCAAAAATATAAGGAGCAAGTAGCCTATGCTTAATACATCAAAACACGTGAGTTTTATAAAATGGCACTAAAAATGCTCTTTTCTCCGAGTGAAAGCAAGAGCGCATTTGTAGGCGATAGCTACATACGAAAAGAAAATTTCATCTTTGCAGAGCTTTTTCATCTAAGGCTTGAAATTTTAAAAAGATACGCTTCATTCGTAAAAACGGCAAGCGATAAGGAGCTTTGCAGGCTTTTTGGTTTTAAAAATTTAAATACCGATGATA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //