Array 1 132500-131672 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NCVC01000013.1 Streptococcus mitis strain RH_8961_10 s_mitis_RH_8961_10_ID_9, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    132499	    36	 100.0	    30	....................................	ATAAAAAATGCTTCTTGCAATACTACTTTT	
    132433	    36	 100.0	    30	....................................	TAATGACCCTATCCCCACAGATAAAGATAT	
    132367	    36	 100.0	    30	....................................	TGAAGAACTTAGTAGATGTAATGGTGATAT	
    132301	    36	 100.0	    30	....................................	TGGCAAGTATGAAGTAGAGTGTGAGACGAC	
    132235	    36	 100.0	    30	....................................	AAAATCCAAAGTAAAAGAGAGAACGCCTGT	
    132169	    36	 100.0	    30	....................................	ACAAGATATACAAATGCTTAATATTAAGTT	
    132103	    36	 100.0	    30	....................................	CCTGACAACCCAGCAGAGGGAAGGTTTGCG	
    132037	    36	 100.0	    30	....................................	AGACGGGCTAGAATCGTTTGCGATGGCGAA	
    131971	    36	 100.0	    30	....................................	GTGATGGTGCATAACTTTGAAAAGCGAATG	
    131905	    36	 100.0	    30	....................................	ACCAGATAACGTAACTACTGAAGTGAACAA	
    131839	    36	 100.0	    30	....................................	CAAAATAAACCTTTACAACTGAATCAAAGT	
    131773	    36	 100.0	    30	....................................	TACCGCTTGTTGTTCTTCTACAAACAACTC	
    131707	    36	  97.2	     0	...................................A	|                             	
==========	======	======	======	====================================	==============================	==================
        13	    36	  99.8	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   ATCAACTCAATGACAAACCAGAAGTCAAATCCATGATTGAAAAATTGGTAGCCACGATTACAGAATTATTGGCATTTGAGTGTTTAGAAAATGAACTAGACCTAGAATACGATGAAATCACCATTCTAGAGTTAATCGATGCGCTAGGAGTCAAAGTTGAAACTCTGAGTGACACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTCATCAATGCATCCGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATAGAGTATATCCAACTCAATCAACTGTCCGTCTTGTTTGTTGAGCCTCGGAAAATCTATGATTTTCCCCAGTACGTATTGGATCAAGACTATTTCTTGAACCCCGAAAATATGGTATAATAAAAGTAACAATTGGGACCTGACGAGCTGAAGTCTAGCTAGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAA
# Right flank :  CACATTAAAAGCTACTCATTTTTTAAGTAGCTTTTTTCTTATTCAAGTTTACATATTAGTCGTCAAAAACCCATTCCCTTGTAGAGAAGCAAGACCGCCAGTCCTACGAATAACACTACCGCTCCTAACCTCTGGCTGGTACTATACATCCGTCTTTCTCCTCGAACTGGAAAGATAATTGCTAGAAATGCTCCGCCAACTGCTCCCCCGATATGGCCTGCTAGGCTGATTCCTGGAATCAGAACACTTCCAATAATATTAACCACAAAAAGTGTCAGATAGGATTGCCCCAACTGCTGGATATAAGGATTACGCGTTGCATAGCGAAGAACAATAATTGCAGCAAATAGCCCATAGAGAGAAGTAGAAGCTCCTGCTGCTAAGGATTTGGGACTAAATACAAAAACAAAGAGATTACCCATCATTCCTGATAAAAGATAGAGAAAGAAAAACTTCTTGGATCCGAAAATTTCCTCTACTTGCCTACCAAGATAATAGAG

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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