Array 1 2892389-2892046 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082326.1 Crassaminicella profunda strain Ra1766H chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 2892388 37 94.6 40 .......G....A........................ ATTCTGATTTTGGATTTATCACTATTGTATTTCTTATGCC 2892311 37 100.0 38 ..................................... TGACTTATTCGATAATCATTTAAAGAAAATTCAACTTT 2892236 37 100.0 39 ..................................... TGAAGGAAGCTGATGGCGGTTGCTGGAACGAAACGGTAG 2892160 37 100.0 41 ..................................... AATAAAATATCAACACCTAATCTTAAGTTTGCAATAGAATT 2892082 37 91.9 0 ...............................CA...G | ========== ====== ====== ====== ===================================== ========================================= ================== 5 37 97.3 40 ATTAGAAAAAGATATAATTCCCTTTGGGAATTGAAAC # Left flank : GACAGCTTTCTTGAGTAAAGCTTATGAATTTGACAAAGACACTATACCAAAAGAACTAGCACAGGATATGGCGGTTAAGAAAGCAACAGAAAAATTAGATGTTATGAGTCTAAATAATGAAGAAAGAGAAATGTATGAAAACGAACTAAAAGCCATGAGAATAAGAAAAGCAGAAATCAAAACAGCAGAAAATAAAGGACGTGAAGAAGGAATAAATGAAGGAATTATAAATACAGCAAAAAACTTACTGGCAATGAACGTAGAAATAGAAATCATATCAAAAGCAACAGGACTAAGTAAGGAAGAAATAGAAGCTATAAAATAATACATTTTGCGAGGGTCTTTGCGTAGTCAAAAACACGGGAGACGCTCGATTGTTGAAAATACTTGATTGTATGTGGTTTTTCTGGTAAGATGAGTATGTGAAAAACAACAAAAAAAGTAGACCCTCGCAAACTGAGAGTTTAGGCTAGTAAAATCAATAGGTGTAGAGGGGTGCT # Right flank : AATGAATTAAAACGCTAGATATATGTATTCAACACATACAAAAGCTAGCGTTATTTTTATATAAAAAAATGTTATTGAATGGGAATAGAAGTAGGTATAGATGTTTGTTGCAAACTACGAAGCTATAGTATACAATGAAACAAATCATAAGATGATGAATGAAGATCAAAAACCAATAGCTGAAAAAATATTAGAAAGGATGGGTAGGAAATGAGAGGGCTTTTACTATTAGTAATATTTTTTTGGGGAATCAATCCTACCATAATGAAAATAGGATTAGTGCATATTCCACCTGTTCCTTATAATGCTTTAAGAATGTTTTTTGCAGTTGCAACATCGTGGATGATTGTTAAATTCACAGGTTCTTACGAGAAAATTGAAGCAAAGGATTTTAAAAGACTCTTTACAATAAGTTTATTTGGATTTTTTATTTTTCAGCTATGCTTTACAATCGGTGTAAATATGACTACTGCTGGAAATGCATCCTTGATTTTGGGAAC # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAAAAAGATATAATTCCCTTTGGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 2 3820798-3817178 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082326.1 Crassaminicella profunda strain Ra1766H chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 3820797 37 100.0 36 ..................................... AACATAAAATCCTCCTATTCCTAATAATACCAAAAT 3820724 37 100.0 36 ..................................... CTTTTTGTATATAACCTATCGTTACACATTTTTTAC 3820651 37 100.0 35 ..................................... AAAATATTAAAGATAAGAAAAGCCAGTAAGGCAGG 3820579 37 100.0 36 ..................................... TGTAAGTCCTAATGCTACACCTTGGGCATCAACATT 3820506 37 100.0 34 ..................................... TGATACAACTTCTGTTTATGCAAGAAGCGTTGAA 3820435 37 100.0 36 ..................................... TAAACTCTGCATTTTCATGTATTTCAGCCGTATCAA 3820362 37 100.0 38 ..................................... GAGGACTTGCAGGAAAAATTGCAGGATATTCTTAATGG 3820287 37 100.0 35 ..................................... TTTAGGTAACAAAACTCTTTAAGTATTGGTATATC 3820215 37 100.0 36 ..................................... TTGAGAACGAAGAGAAGAAAGAACCTGAAAAAGAGC 3820142 37 100.0 35 ..................................... GTAATTATGGTTACATTTCAAGATCATAAGATCAG 3820070 37 100.0 35 ..................................... TTTTCTTAGGATCTTTTAGAGTAGCAGCAATCTTA 3819998 37 100.0 37 ..................................... AGTATTGGTATATCTGTACTTGAAGTATATTTTTCTA 3819924 37 100.0 38 ..................................... ATGCTGCGTGGTTCATTATAAAATCCATGTTTAACCTC 3819849 37 100.0 35 ..................................... CTGAATTTGAATATGTTTTCTCTAAGTGTTTTCTT 3819777 37 100.0 38 ..................................... ATTCTTCCGCTAATTCCCTCGTAATTAATCCCTAAACT 3819702 37 100.0 38 ..................................... TGTTGTTTATATATATAATATTATCAGATTTATATTAT 3819627 37 100.0 35 ..................................... AATATGCAAGGCAAGTCCTACTATAGCTCATTTAA 3819555 37 100.0 36 ..................................... CTATATCTATTATGATCAATTCTTTCATGTTCAATT 3819482 37 100.0 37 ..................................... GCAAACTGCACAAATCTCATGATTGGCATTGCCTTAA 3819408 37 100.0 35 ..................................... ACATTCTGTCCTATAACCACTACATCTTTCCTATC 3819336 37 100.0 37 ..................................... ATATGTCTTGATTTTGAACATTTGTATATTCGTTTTG 3819262 37 100.0 37 ..................................... ATGCTCTACTAGCTATTCCAATTAAATTGAATATATT 3819188 37 100.0 36 ..................................... AGGTGTTTATCTAATTGTTCTGGTGTTACATTTGAA 3819115 37 100.0 37 ..................................... ATTACTTTTCTAAGTTCACTTGAATCTGATTTTCCAC 3819041 37 100.0 36 ..................................... ATTTGTCTAATTCTTCGCCTGTCATGTTCAATACAC 3818968 37 100.0 36 ..................................... GTAATGATAAAATTGATATAGGCAAGCCATATCTTC 3818895 37 100.0 37 ..................................... TTCTGGTTTTGCTCATTTCATGCGTTTTGTTTTCTTT 3818821 37 100.0 36 ..................................... TCTAGAACTAATTCAGGGCCACTTCCATCCGCAAGC 3818748 37 100.0 36 ..................................... TCACTCAATCTTCCTTTTTTAGTCTTAACTTCTATA 3818675 37 100.0 36 ..................................... TTGAAAAATCTTGATTTTATTGCGATTGGTTTTTCT 3818602 37 100.0 37 ..................................... TCGTTTTCTACTATTCTTTCTTCACTATAAGGTATAT 3818528 37 100.0 38 ..................................... GATACATCTAGCAACATCCACTTAACATTTCCAATACA 3818453 37 100.0 35 ..................................... AAATGTATGATGATCTAAAAATCAATAATGAGTGT 3818381 37 100.0 36 ..................................... AAAAAACTTTTCCCTAATTCTTTTTGGAATTCTTCA 3818308 37 100.0 35 ..................................... AAGTACTTAGTAAACTTTCAATCTCAGTACAGTGG 3818236 37 100.0 38 ..................................... ATGAAAATCATAGAGGGGAATCATCCCCTCGCACTATC 3818161 37 100.0 36 ..................................... CAAGCTCATATTCTTCATTTGTTCTCTCTATCCCTA 3818088 37 100.0 34 ..................................... CAGATGTTAAAAAACAAAATAGAGACTTATTGGT 3818017 37 100.0 35 ..................................... AAGTATAGATCCACTGCTTTCTTCAACATATTTTC 3817945 37 100.0 37 ..................................... TAAAAAATTATGCGAAATTCAACCACCAGAACAACCA 3817871 37 100.0 36 ..................................... TTATATCAATAAAATACTTTCGAGTTATCTGTATTA 3817798 37 100.0 35 ..................................... GGTAATAAGTGTGATGCTGAAAAAGTTTCAGTAGT 3817726 37 100.0 37 ..................................... AAAAAGCTTTAAAATGGAACGAGATTAGAAAAATAAT 3817652 37 100.0 35 ..................................... TTATAACATATTAATCTTCAAGAAACCACTTTCCA 3817580 37 100.0 37 ..................................... TTCTTATATATTCAGATAGTGAGCGTCCTGCATAAGT 3817506 37 100.0 35 ..................................... ATTTCTTCATATTTTTTTCTAAATCTTGATAATGA 3817434 37 100.0 36 ..................................... TTGATAAGACTAAATCTACATTATCCGCACGTTACA 3817361 37 100.0 35 ..................................... TGTTTTCCTCTGAATTTTCATTCTGTTGGCATTCG 3817289 37 100.0 37 ..................................... TATTGAAAATCTCGATCCAATGATCTTTCTCCTGATA 3817215 37 89.2 0 ........A.....................A.A...A | C [3817181] ========== ====== ====== ====== ===================================== ====================================== ================== 50 37 99.8 36 ATTGAAGAGGATAATCCATTAAAACAAGGATTGAAAC # Left flank : AAATGGATCTTTGCGTGTGTTTATTTGTAATATCTATAGAAACTGATACAATAAGAAAAAATGAGAGCAGTTAGAAACTGTATCTCATTTTTTTTATTCTAATTCTTATATTGCATAAACAATATAATTATTCTAGGTTTATTCTCGTTAGATTTTTTTGCCTAATGTGAAAAATTATGTAGGCTGTTATTTCTATCATATTTAGTATGTAGATAGATTGCTGACAATGGAAATATATGATAAACTCATAAAAGAAAGATTTATCTTAAAAAAGGGAATCCTAAAGAAAGAACAAAGACTTATAAAGCTTTGTTCCTATAAAATTATTGACAAATTTGGAGACTAACCTTTGTAATTAAGTAAAATCAATAACTAGAAGGTGCTGTTTATGGGTGAAAAACAAGGGTGTTTACATCATATCTTTATGATTTTTACCAAAAAAGAGCTATTTAAAAATATCAATAAATCTAGCTATTCGAAACCCTACAGCCTATATAGCT # Right flank : ACGAGAACTTAGAAAAGCTATCAAGGCAGTAGGACTGCTTGGATAGCTTTTTTTATAGTAAAATTTAGAAAAAATGCATTGTAATAATAATGATTATCATTTACAATTATACATAGACAAAGATTATACGATAATATTTGTAGTTAATAAAAAATACAAGACGTCAAATTTTACCAAATATGAACAAGGAATTTGGGGGATTTTGTGGAAATTATATACTGGGGTGGGGAAGAAAGGGGAGATCTATATGAAAAAAAGAAGCGTGGGGATTAGATTTAAGTTAATCGTAATATTTATTATACTCATTGCTTTACCATTAGTTGCTTTAGGACAAAATGCTTACTCAAAGTCTGTAGATTTAACACAAAAGGAATTAGAGCAATCATCTTTTCAACTGATCAAGCAGTTAAATGTTTCTATAAGTAACTATTTAAATGGGATAGAAAATTTCATTCAATTTATGCCTAATGAAGATAGTATAAAAGAACTTTATGAAAATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAAGAGGATAATCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //