Array 1 1121940-1125624 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050403.1 Acinetobacter baumannii strain VB2486 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1121940 30 96.7 30 ............................A. GCCCAGAGTTAGCATCTTGATGGTTCTCAA 1122000 30 96.7 30 ............................G. AAACAAAGACTTTGATTTAATCTGGTGGAA 1122060 30 96.7 30 .............................G AAGCAGAACAAGTTGATATTGATTCACCTA 1122120 30 96.7 30 ............................G. GAAGACAATAAGCGTATACCTATTCCAGAA 1122180 30 96.7 30 .............................C TCGGCACAGGAGTGCATTCGAAGTTGATGA 1122240 30 96.7 30 .............................G AATGGGTATTAGAACTCAGTGAAGATATGT 1122300 30 96.7 30 .............................A CTGGCTCAGGCAGAGAAGGCATGTCAATGC 1122360 30 93.3 30 ............................CA CTTGGGCATGTTCTTAGATCCAGACACAAA 1122420 30 96.7 30 .............................C TACCTGCTAATAGCTTCTTTGCCCTAGTTC 1122480 30 100.0 30 .............................. GCTTAACCTTCACGCCATTTGGATAAACTG 1122540 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 1122600 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 1122660 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 1122720 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 1122780 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 1122840 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 1122900 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 1122960 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 1123020 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 1123080 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 1123140 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 1123200 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 1123260 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 1123320 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 1123380 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 1123440 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 1123500 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 1123560 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 1123620 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 1123680 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 1123740 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 1123800 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 1123860 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 1123920 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 1123980 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 1124040 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 1124100 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 1124160 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 1124220 30 93.3 23 ............................AA CAATTGCCTGAGAGCCACCAGTA Deletion [1124273] 1124273 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 1124333 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 1124393 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 1124453 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 1124513 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 1124573 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 1124634 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 1124694 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 1124754 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 1124814 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 1124874 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 1124934 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 1124994 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 1125054 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 1125115 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 1125175 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 1125235 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 1125295 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 1125355 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 1125415 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 1125475 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 1125535 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 1125595 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 62 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //