Array 1 1113597-1115204 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027286.1 Clostridium chauvoei strain SBP 07/09 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1113597 30 100.0 35 .............................. AGATAACAACTGGAGAATAAAACCTATAGAAGAAG 1113662 30 100.0 37 .............................. AAATTGTGTTCCGCCGGGTGCAAAATTCCCTTATATA 1113729 30 100.0 37 .............................. CAGGAGTCGTTGTATTTGATGAAATACATGAATATGA 1113796 30 100.0 36 .............................. AAAGGAGAAATATATAGAGTTGATAAAAAAATATTT 1113862 30 100.0 36 .............................. ATTCTCCTAAAGATGATAAGAATGAATCTTTTAATG 1113928 30 100.0 36 .............................. AGATAAGCTAGGTAGTGACCCTGCTGGAAAATTACA 1113994 30 100.0 36 .............................. GCTGAATCTGGTGAGGACAATGTTGATATAACAATT 1114060 30 100.0 36 .............................. TTTGTGCAATACTATAGATATAGCAAGTGCAAGTTC 1114126 30 100.0 36 .............................. CATCTGACACTAATAAAATAGAACTAGAGATTTACA 1114192 30 100.0 34 .............................. CCTTCTGATGATATAACATTTGCTATAAGTTGTG 1114256 30 100.0 36 .............................. GTTAAAAATTTTCACCCACAAGGAACTTTTATACAA 1114322 30 100.0 35 .............................. AGTGAAAAAGAAAAGGAAATTAGAAAGAAAATAAG 1114387 30 100.0 35 .............................. AAGTCAGTTTATGTGTGGATTAATCCAAAAGCATT 1114452 30 100.0 36 .............................. TGGACTTTCCTCCCAAGCTTATTATTTTTTAAAACA 1114518 30 100.0 36 .............................. TTGTTAGCTTTCTGTATTTGCAAATCGCATATAATT 1114584 30 100.0 35 .............................. AAATTTGGAGGGATAATTTAAATGGGTATATTAAA 1114649 30 100.0 36 .............................. CTTTTAACATATCCCAATCCTTGATAACGAGAATAC 1114715 30 100.0 35 .............................. GATGCTTTGAAGAAGTTAAATGATGAAGAGAAGTT 1114780 30 100.0 36 .............................. TAAGGAAATGTACAACAGTATAATTGATARAAAGAA 1114846 30 100.0 36 .............................. AATTAAAGATACTAAAAAAGGTTTTATAGACTTCAC 1114912 30 100.0 36 .............................. AAAATAAAAAATCCAAAACATTGATAACGAGAATAC 1114978 30 100.0 35 .............................. GATGCTTTGAAGAAGTTAAATGATGAAGAGAAGTT 1115043 30 100.0 36 .............................. TAAGGAAATGTACAACAGTATAATTGGTAAAATGAA 1115109 30 100.0 36 .............................. GGTAGAAAATAATGATGAAATAAAATATTGTTTTTA 1115175 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 25 30 100.0 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : ATAAAACCTTTTTACCATTTAACTTAAAGGATGGGATGTAAATTGAAAAAACAAATTAATTATAATTACGTATTTATATTTTATGATATAAAGGAAGAACGTGTAAATAAAGTATTTAAAGTATGTAAAAAATATTTATCACATTTTCAAAAATCAGTATTCAGAGGAGGAATAACTCCTTCAAAATTAATTTTATTGAAAAAAGATTTAAATAAAGTTATAGAAAAAGAAGAAGATTTTATATGTATTATTAAACTTTTAAATGGGGATGTTTTTGGAGAGGAAATAATAGGAGTTCAAGGGCAAACAACAGGAGAAAGTTTAATAATATAAAATTACCAACCTAATAATATAGGTTAGAGCTTTAAAATACTACGGTATAAGTTATTTTTGTATTTAACTTTTATTTATAATAAAAAGCTGGTAATATATTTATATAAACATTATAAAATGGGCGTTGCATAGATATATAGTTATAAAAGAACTCTCATTTTTCTAAG # Right flank : TATCCGAGACAGTAGATAGTTTTGTGTAAAAACAAAACTATCTACTGTTTTTTGTATTAACAGTTGGAAGTTTTGGAATAATATACTATATAAATTAGGAGAAATTATTCTGACAAGAAAAATTGATACCAACTTTGATTACAATGAGGAAATTAAAAGATGCAAAACAATCGATGATGTAATGGGTAAAAACGGATTAATACAAAGATTAGTTAAAGATGTTCTTGAAAATATATTAGAAGGTGAAATGGAAGAACATCTAGGAAGAAATAAATATGAACGTGTAGAAGCAGTTGATCAAACTAAGAAGAACTACAGGAATGGTTATAGTCGCAAGAATTTAAGAAGTTCCTTCGGTGACGTCGACCTAGACGTACCCCGTGATAGAAATGCTGAATTTGAGCCACAAATTATAAAAAAATATGAAACCGTGTGTACTGAGTTAGATAAAAAGATTATATCTTTATATGCTAAAGGTATGTCAACATCTGATATTCAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 1116768-1117458 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027286.1 Clostridium chauvoei strain SBP 07/09 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1116768 30 100.0 36 .............................. TAATTGAAACTAGTATCACTGATTCTTTTTTTTCTT 1116834 30 100.0 36 .............................. AAAGGATTTCTTGTTCCGTATTTTTTAGATAAATTA 1116900 30 100.0 37 .............................. GGCACTTGGTAAAATATACCTTTTGCTTAAACTCTGC 1116967 30 100.0 35 .............................. TAAAATACCACTCTTCTATTAATCTTTGGCTTGTA 1117032 30 100.0 37 .............................. ATCTGCTTAGGATAGTCTTGTGTTTCTTCAAAGCTAG 1117099 30 100.0 36 .............................. ATTGATGGAATGGTTAATTGATTATAAGAGATTGAA 1117165 30 100.0 35 .............................. CTTATCCATCTGCCCATACCAGTTATACCATTCCA 1117230 30 96.7 36 .......................G...... ACATATTTAACTTTCAAAAGCAACTGATTGCAATTC 1117296 30 100.0 37 .............................. ATGGTAGGCAATATATTTGTTGGAACTTATACTAAAG 1117363 30 100.0 36 .............................. GATTTATAGTTTTGACTATGATGATGAGTATATATA 1117429 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.7 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : CCTGGTATAACAATTGGAGTAACCTTTCAACATTTTTTGACTTCTCTCCAACTATAAGAAAGATGATTTATACTACAAATATCTTAGAAGGTTTTAATCGTCAAATACGTAAATTCACTAAAGTTAGAGTCATATTCCCAACTGATGAATCTTTAAATAAGTGTGTTTACTTAGCAACAATGGAGATACTAGAAAAATGGACTCAACCTATACATAATTGGGGTGCTACGCTAGCGGAGCTATCAATAATATTTGAAGATCAATTAAAAGATGAATTAGCTTAAAAGCTTGTACTTTTTATAAATTATATGCATACTATTAGATTTTTTTGAAATACTAAAAAAGGTAATAAAAAACATTATTAGTATTTCTTAAATATAAAAAAATATTACTGGAAATGAAAATTTCCAGTAATATTAAAATAATAAAAATGATAATTACACAGAATTATCTATTCTCTCAAATATCCTAACAATTAAGTATTATCTCTTATTCCCCTT # Right flank : TACAAGGCAATTTGAGTACTTGAGTATACCCAATTTGATAGACACATAGAAAGTACGTATAATAATAATTAAGAAGGATGTGTTTATTAAATGGGAAACCAAAGAAGATTTACTAAAGAATATAAAGAAGAAATAATTAGGCTAGTAACAGAACAAGGTAAAAAGGTTTATGTTGGTGATATTACCTATATAAGTACTGAAGAAGGCTAGTTGTATTTAGCTACTGTAATTGACTTATTTGATAGACGTATTACAGGTTGGGCAATGGATTCTACTATGACTAGAAGACTAGTTATAGATGCCTTTAATACAGCTGTATTAAAGGATGTTGTTATGATAATGCTTGTGCAGAATTATTCTTCTTATCTTTAAAGAAGCACTTTCTTTATGGAAGAAAATTTAAAACGAGAGCGGAATCAAAACAAGCTATAGTTGAATATATTGAATTATTTTATAATGCAAAAAGATTACACTCTACCTTAGGGTATAAGTCACCAAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //