Array 1 51-750 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSRK01000124.1 Actinomyces naeslundii strain F6E1 F6E1_contig129, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 51 29 96.6 32 ............................T GAGGCACTAACCTTGCTGGGGATTATGAACGT 112 29 100.0 32 ............................. GTTGACGTGACGTGGAACCTGGACGACTCGGC 173 29 100.0 32 ............................. AACGGGCTCACTGTCCTGGAGATTCTTGAGCG 234 29 100.0 32 ............................. AACGGGCTCACTGTCCTGGAGATTCTTGAGCG 295 29 96.6 32 ............................G TCTCCTACACCAAGTGAAAGGCGAGACGAATG 356 29 100.0 32 ............................. GTCCCCTACTGGGGAGGCGGTGCACTAATTCA 417 29 96.6 32 ............................G ACGGTGCCGGTGTTGTCGTAGTGCTCGGCGGC 478 29 96.6 32 ............................G ACGGTGCCGGTGTTGTCGTAGTGCTCGGCGGC 539 29 96.6 32 ............................G TTCGGTCTCACCATGCCAACTCCTCCATATCC 600 29 100.0 32 ............................. GCGTACTTAAGGCCGGCCGTCAGGTTGGCGAT 661 29 96.6 32 ............................T GACCGTGCGGCTCTCACTTGATGATGACGCGA 722 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.3 32 GTAAACCCCGCGCGAGCGGGGATGATCCC # Left flank : CGAGCGGGGATGATCCCACGATGGTGAACAAGACGCTGAAGGGTGATCGAG # Right flank : TGCTGGGCTTCGGTGTCGGTGGCGTAGCGGGCGTAAACCCCGCGCGA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCGCGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [35.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //