Array 1 19987-21403 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000018.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_118, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 19987 36 83.3 37 ...G.CTGTT.......................... ACGGCTAGATGCCCGCCTGCGGCGTGCGCCCGGGGGC 20060 36 100.0 36 .................................... GCAGGCCAAGGCGCTGGCCAACCGCACGCTGTACCT 20132 36 100.0 38 .................................... CCGGTACTGTCGGTGATGGTGACTGCCGAGAGGTTGCC 20206 36 100.0 36 .................................... GCGAGTGACGACGCCGAGGATCTGCGCGCCGGACGG 20278 36 100.0 37 .................................... CCGTGTCTTTCCAGCCGACGCCAGCGCCAAATAAGAG 20351 36 100.0 37 .................................... ACCGTGGTGGTCACGTGGTACCAGGGCGGCGTGCTGA 20424 36 100.0 36 .................................... GGTCCTGTTGGCCCAGGCGGCCAACTTAGCGGTGCA 20496 36 100.0 36 .................................... GCGGCCTTCGGCGGCGCGCTCGATGGCGGTGACCGG 20568 36 100.0 36 .................................... CTCGGCGATCGCGGCGAAGTGCTCGGCAACGGTGCT 20640 36 100.0 36 .................................... AGCGCTTCACGCATCGCGCCGCGGCGGGAGGTCCGG 20712 36 100.0 37 .................................... CAGCCCGAAGAACAGAGGAGGCGCGCCATGTGGCACG 20785 36 100.0 38 .................................... CCGGGGACGACGGTCACGATCTGCTCCATCACGCTCGA 20859 36 100.0 36 .................................... CTGCGCCTGACCGGCGCTGATTTCGGGCAGGGCCCA 20931 36 100.0 37 .................................... CGTTGCGGGGCGATACGGTCGACCCGGCCGCGGCGCG 21004 36 100.0 37 .................................... CGGTCGACCCCGAGGACATCGCGCGGCTGATCCGCTT 21077 36 100.0 36 .................................... CGCTATCGCGCCACTCGGCATATACGCGCGCTCGAC 21149 36 100.0 36 .................................... CCCAGGAAGGCTTCGGCGCCTGGCGCGCCGGTACGG 21221 36 100.0 37 .................................... GGCCTCAAGCCGAGTGAGGAGCGGCTGCGGGCATTTT 21294 36 100.0 38 .................................... GTCGCCATTTGCATTCCCGAGCGTCACGGTTTGCCGAA 21368 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 20 36 99.2 37 GCTTCAACGACACCCCGGCGATGAGCCGGGGAATAC # Left flank : ATCTGGCCGCGGCCTATGCCGCGACGACCGGCCGACAGATCGACACCGCCGCACTGTGGGCCGCCTTCGAGCGCCTGGGCAAGGTGCCGCAGATGGCGCGCTCGCTGGTCGAGCGGCTGGCGCTGAATCCCGCCATCGAACTCACCGCCGCCGTCGATGCCCTCGCTGCCGACCTCGCCGAGCAACGCGATTACGGCTCGCTGTGGGCGGGCGTCACGCCGCTCGACCGCAGCATCCTCGCGCGACTGGCGAACGGCGACGCCGGGCTGTTCTCGGAGGAGGTCCGCGAACAGATCAGCGAGGAACTCGGCGTGCCGATGCTGGCTGTCGCCGCCATGCAGGCCGCTATCCGTCGCCTGCAGCGGCGCGGACTCGTCACCCGCCAGAGCGCCCGCGGCAGCTATGTGCCGGAAGACCCGAACTTCGCGGCATGGATTCGCGAGCGCGACCTGCCCGACTGACACCGGGGCCCGGTGACCGCCGCGCAAGTCGATCACGCG # Right flank : CCAGCATGCCCGCATCCCGTTGATTCCATTATGCGAAAACCGCGGTTTGCGAGCGCTGTCCGAAAGCCGGCGTGGCGGCGCCATCCGGGCCGGCTGGATGAGCGGTCCATGTTGACAAAGTAGCTGATGTGGCTTGCATTTTTTAGCTGCGAGCGCTCGCCGGGGTTGCGACGCCACCTCAGCGCTCGCACGCGCGCAGCAGCCCCAGGCCCAGGCCCTCGCCGGCGCCCAGGCAGAACGGACCGCGCTGCGGCTGGGCAAAGCGCAGCGTCAGCCACGCCCGCGGATAATCGCGCAGATGCTGTGGCACGCTGTAATCGCCCGTCCGCACGCATGCCGACAACTGCGCCGCTGGCTCGAAAGCCACTGACTCGACCAACTCCGGCGCGATACCCGCATGCCTCAGCAAACGCTGTGTCGTGCGCCCCAGACGTGCCTTGCCGCGACGCATGTCCCAGCCCGGCAGCACCACCGGTGTGGCCGTCGTCCAGGCCCGCGCC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAACGACACCCCGGCGATGAGCCGGGGAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.70,-15.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 1 59-1610 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000022.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 59 36 100.0 35 .................................... GGGCTCGTCGCGCGGGTGATGGCGCCCGGCGCGAA 130 36 100.0 36 .................................... GCGGCGCAGCCAGCCGATGCGGCAAAGCGCGTCGAC 202 36 100.0 36 .................................... GTGGCGGTGGGATCTGGCGGATTGAGCCAGATCCCG 274 36 100.0 35 .................................... AACGGGCTCTACGACTGGCTCGGGGCCGATGCCCC 345 36 100.0 37 .................................... CTGCCCGGTGGGCTCGATGCGCAATAACGCCAACCTC 418 36 100.0 35 .................................... TCCGCGGTGCGTTTCTCCGTCGGCGTCCTCACGCG 489 36 100.0 36 .................................... GGCGGCCTTACGGTCTCATCCCCGCCGACGCAGGCC 561 36 100.0 36 .................................... GTTGCCCACGCAGCGCGGTCCTCGGCTGTCGGATCT 633 36 100.0 36 .................................... GGAGTCGGCCAGCGAGGCCGCGGTGCTCGCCGGCGC 705 36 100.0 36 .................................... CACCATCGGTGAGGTGGCAGCCGATGCGTGGCGCCG 777 36 100.0 38 .................................... CAGTTGTACATGGGCACCAACTACGCGATGGCAGCCGA 851 36 100.0 36 .................................... GTCAGCCTCGTCGCGGTTGGGGGCCGCAACGTACTC 923 36 100.0 36 .................................... TTTCGCGACCGGGTCGGGGTACGAGGCCCGCCACAT 995 36 100.0 37 .................................... CCTGCTCCACGCGCAGGAGGTCTTGGGGTTTGTGGCC 1068 36 100.0 37 .................................... CCCGCGAAGTTCGACGTGAAATCGCCGACGCCGCCGG 1141 36 100.0 36 .................................... TACCGCGTGCGTGGTCTGGAGGGTTAGGGCGTGGCA 1213 36 100.0 35 .................................... GCGGCGCTGCCCCCAGGCGTGGCGGCGGACCTGGC 1284 36 100.0 36 .................................... GAAGCTCGGCCAGTTCGAGTCGATGGGGTTGGAGTT 1356 36 100.0 35 .................................... CTCGACATCATCGAGGACGCCGCGCGCGAGGCGTT 1427 36 100.0 39 .................................... GCCGGCGTAGGTGGCGGCGATCCAGTCGGGGATGGAGAG 1502 36 100.0 37 .................................... GACGAAGGCGTGCGCTCCGAGTGCGCCATGCGCCTCG 1575 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 22 36 100.0 36 GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAG # Left flank : CGCGGCAATTAGCCGCGGATGAGGGGCTCGTCGCGCGGGTGATGGCGCCCGGCGCGAAG # Right flank : GGACGAAGGCGTGCGCTCCGAGTGCGCCATGCGCCTCGGCTTCAATGAGGCCGCGGCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAGCCGCGGATGAGGCCGCGCGCGCCGCGCCCCCCGCCGACGTCACCGCCGCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGACGCAGCGCGCGGTGCTTGCGCGCGAGCTGCTGCTCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGCGGTGTTGTTGGCGGACACGCCGCGCTCGAGGTTTGAGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGCGGTGTTGTTGGCGGACACGCCGCGCTCGAGGTTTGAGCTTCAATGAGGCCGCGGCAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.10,-15.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [25.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 2215-2469 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000022.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 2215 37 100.0 36 ..................................... CGGATGCCCATGGATAGGTTAGGTGTGTGGGAAAAG 2288 37 100.0 36 ..................................... CGGATGCCCATGGATAGGTTAGGTGTGTGGGAAAAG 2361 37 100.0 35 ..................................... TCCGGTGGAAATTACGGAATACACCATTCGAGCAA 2433 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 4 37 100.0 36 GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAGCCGCGGATGAGGCCGCGCGCGCCGCGCCCCCCGCCGACGTCACCGCCGCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGACGCAGCGCGCGGTGCTTGCGCGCGAGCTGCTGCTCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGCGGTGTTGTTGGCGGACACGCCGCGCTCGAGGTTTGAGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGCGGTGTTGTTGGCGGACACGCCGCGCTCGAGGTTTGAGCTTCAATGAGGCCGCGGCAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAGCCGCGGATGAGGGCGGTGTCGCACTTCCTGGTTGCGCTTCCGGGCGA # Right flank : GTCCGGTGGAAATTACGGAATACACCATTCGAGCAAGCTTCAATGAGGCCGCGGCAATTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAGCCGCGGATGAGGATGGGCCCTGCCCGAAATCAGCGCCGCGCAGGCGCAGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGTCAGCGGGCGCGGGCCGTGGACGGCGGCGGCGCTTGAGGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGTCAGCGGGCGCGGGCCGTGGACGGCGGCGGCGCTTGAGGCTTCAATGAGGCCGCGGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAATTAGCCGCGGATGAGGCCGC # Questionable array : NO Score: 2.66 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.30,-15.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 3 3001-3258 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000022.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 3001 37 100.0 36 ..................................... CTCCACGCTCCTCCACGCCCTGCGCACCGCGCTGGT 3074 37 100.0 36 ..................................... TTTCGCGACCGGGTCGGGGTACGAGGGCCGCTACAT 3147 37 100.0 38 ..................................... GCGTTGCAGCAGCACGCACACTGCGCTAACCGTCCTAC 3222 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 100.0 37 GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGG # Left flank : GCAAGCTTCAATGAGGCCGCGGCAATTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAGCCGCGGATGAGGATGGGCCCTGCCCGAAATCAGCGCCGCGCAGGCGCAGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGTCAGCGGGCGCGGGCCGTGGACGGCGGCGGCGCTTGAGGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGTCAGCGGGCGCGGGCCGTGGACGGCGGCGGCGCTTGAGGCTTCAATGAGGCCGCGGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAATTAGCCGCGGATGAGGCCGCAGCGCCATGCGCGCCGCCGCCCGCGCCGGCGC # Right flank : GGCGTTGCAGCAGCACGCACACTGCGCTAACCGTCCTACGCTTCAATGAGGCCGCGGCAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAGCCGCGGATGAGGGCGGATGCTGCCGATTCGCGCGCCGGATTTGTCCGAGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGGGCTCGTATCCTGCGAGTAATGCGTTCGACAATGAGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGAGGCGCTGCGCGAGGCGCTCGACACGACCGCGTTCAGGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGGACATGACCACCACGCCCCTCCTCTGGTCAGTCGCAGGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGCGATGGCCCGCATGCAGGCCGTGCTCTGGGA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.30,-15.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [18.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 4 3470-4530 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000022.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 3470 37 100.0 35 ..................................... GGCTCGTATCCTGCGAGTAATGCGTTCGACAATGA 3542 37 100.0 37 ..................................... AGGCGCTGCGCGAGGCGCTCGACACGACCGCGTTCAG 3616 37 100.0 37 ..................................... GACATGACCACCACGCCCCTCCTCTGGTCAGTCGCAG 3690 37 100.0 37 ..................................... CGATGGCCCGCATGCAGGCCGTGCTCTGGGACCGCAT 3764 37 100.0 37 ..................................... TCCAGCCGCAGAACACCGAGAGCGTGATCCACAAAAT 3838 37 100.0 37 ..................................... GTCGTGGCGCCGCGGCGGCTGATCATCGTCCCGCCAG 3912 37 100.0 36 ..................................... CCAGCCGCAGAACACCGAGAGCGTGATCCACAAAAT 3985 37 100.0 35 ..................................... GCGACGCCGCAGACCTATACCGAAATCGGTGAGGT 4057 37 100.0 36 ..................................... CCAAGCGACGGCGCGCCGAGTGGGTCGCCTCGGAGC 4130 37 100.0 35 ..................................... GAGCCTGTAAGGTCTGCACCGCCGAGCGATCCGCG 4202 37 100.0 35 ..................................... GAGCCTGTAAGGTCTGCACCGCCGAGCGATCCGCG 4274 37 100.0 36 ..................................... CGCGCCGAGGCCGCGCGGCTGATCGACGCCGCCCGG 4347 37 100.0 36 ..................................... TCCACGACGGCTTCGGCGCCTGGCGCGCCGGCACGG 4420 37 100.0 37 ..................................... GCTTCAGCTTCAAGTACTGCGCCGGCGCCGAGTTGAA 4494 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 15 37 100.0 36 GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGG # Left flank : GCGCCATGCGCGCCGCCGCCCGCGCCGGCGCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGCTCCACGCTCCTCCACGCCCTGCGCACCGCGCTGGTGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGTTTCGCGACCGGGTCGGGGTACGAGGGCCGCTACATGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGGCGTTGCAGCAGCACGCACACTGCGCTAACCGTCCTACGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGGCGTTGCAGCAGCACGCACACTGCGCTAACCGTCCTACGCTTCAATGAGGCCGCGGCAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAGCCGCGGATGAGGGCGGATGCTGCCGATTCGCGCGCCGGATTTGTCCGA # Right flank : GATACCGCTCGAAATGTCGTTGTGCGGCGCCGACTTGCAGGGGCCTTTGCGAGCGCTGCGGGCAGGGGCGGACTCCTGCAGTGCGCGCCGCTCCGGGTTGGCATGCCGGACCGACGCAAGGTCCTGATTGTCAATGAGCTTGGCGCTTGCGAGCGCTGCCCGGGGTGGTGCCGGCAGTGGAGCGCTCGCGCGGCCGGCGGCGGTCACAGGATGACGGGGCCGCGTTCCGGCGGTTCATAGGACTGACCGAGGCTGATCACCCGCGGTGCAATGGCGTCGGCCGGGCCCATGTCCATCAGGATCACGTGATCGTGGCCGTGCAGGATCAGGTTGTCCAGCAACTGCACCAGCTCCGCATGCCGCACCCGCGTCAGGCGGCACTGGAAGACGGATAGCTGCACCCAGTCGCCGAACCCCTTCATCAGCCGGAACACGCGCCGCCAGCGGCGGCTGTCGCGAATGTCGTAGACCACCACGTACAGATGCTCGTGCGCGCCTGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.30,-15.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 1785-662 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000052.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_152, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1784 36 100.0 37 .................................... CCGCGCCCTGCCGCCTGCCCCTCGCGCGCCAGGCCGC 1711 36 100.0 35 .................................... CCCGAGCGGTCGACGTAGCGATCGCTCCCGAGGCG 1640 36 100.0 35 .................................... TCCAGGAATTCGCGGACGGTGCTTTCCCACCTCGC 1569 36 100.0 39 .................................... CGCGAAAGGTCAGCGCCGCCCATGTCGAGCTCTTCGATA 1494 36 100.0 36 .................................... GGACCTGATCAGCACGGCTGAGAAGGCGGCCGTCGC 1422 36 100.0 37 .................................... GCGGTCTGCTCGAGCACGCCGACTACATCGCCATCGG 1349 36 100.0 36 .................................... CAATCGGCGCAATGGGAAACGCGTCTACGCAGGGAG 1277 36 100.0 37 .................................... GGCTCACGGTGGTCGACAAGGCGATGGGCGAGTGGCG 1204 36 100.0 36 .................................... CCCGATGCGCGAGCCGCGGGTGATCGGGTTCGAGTC 1132 36 100.0 36 .................................... GACGGTGATCTCGGCGCGGCGCAGCCAGCCGATGCG 1060 36 100.0 37 .................................... GCGATCACCTGCCCGCGACCTGCGATTCCAAATTCTC 987 36 100.0 38 .................................... GCCGCCGGCGCGGCGACCGAGACCGTCGGCCGCCACGA 913 36 100.0 37 .................................... CGCCTGATCGGCCTCCGCGGGAGAGCCCCCCGATGAG 840 36 100.0 35 .................................... CTGCGCCTGCTCGCCGCGAGCAGCGACTACACCAG 769 36 100.0 36 .................................... GGCCAACGGCTGGACGCTCAGCAGCGGGGTGCTCAG 697 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 16 36 100.0 37 GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAG # Left flank : TGAGCGGCGTCAGCATGCGCATGCCGATGTCGATGATCCGGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGCCGACAATCCTGTCGTCCGCATCGTTGATGACTTGGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGATGGCCGACGCGTGGGTCGAGTTCGCCCTCACCGGGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGCCGGCCCCGTAGCGCAGCAGATACCAGTACGCGCCCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGATCACCCAGTTTCGCCGAGCGTTCGACGAGATCGTCGCTTCAATGAGGCCGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCAATTAGCCGCGGATGAGCCGCGCCCTGCCGCCTGCCCCTCGCGCGCCAGGCCGC # Right flank : GGCCAACGGCTGGACGCTCAGCAGCGGGGTGCTCAGGCTTCAATGAGGCCGCGGCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTAGCCGCGGATGAGGTGCTTGTTTCGGCTAGCGTTTATGCCGTTACTCCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGCGCGCGCCGAAGCGCACCGCGCCGCCGCGCAACCGCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGGGCGTGCGCTGCGAAATCAGCGGCCTGCGCGAGCTCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGCTCATGCAGGGGCAGATACCCCTGCCGCCCGGCGCGGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGCGGATGCCCATGGATAGGTTAGGTGTGTGGGAAAAGGCTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.10,-15.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [31.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 2459-1994 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000052.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_152, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 2458 36 100.0 35 .................................... GCCGCATGAGGGGCCTGATGAGGGGCCCACATCTG 2387 36 100.0 35 .................................... GGCGCCTCGCGGAATCAGGGGCGGAGACAGACCAT 2316 36 100.0 36 .................................... CGGCGTCAGCATGCGCATGCCGATGTCGATGATCCG 2244 36 100.0 36 .................................... GCCGACAATCCTGTCGTCCGCATCGTTGATGACTTG 2172 36 100.0 35 .................................... ATGGCCGACGCGTGGGTCGAGTTCGCCCTCACCGG 2101 36 100.0 36 .................................... CCGGCCCCGTAGCGCAGCAGATACCAGTACGCGCCC 2029 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 7 36 100.0 36 GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAG # Left flank : CCTCAATGCGATGCTGCGGGATCAGACAACTTGGAATGCCGCGCGCCACATCAACTTGGCCATCAGCGCTTGACTTCGAAGACAGTTGCTCTCCCAGGACTTCGCAGGTAAGCCGGGGCCCGATCCTGAGCGCATCGCCGTGCCCCGCAACATCCGCGCACGATCGGGGTGCCGGAAGGCTACATCGCCAAGGGCGTCTTCCCCCACGAA # Right flank : ATCACCCAGTTTCGCCGAGCGTTCGACGAGATCGTCGCTTCAATGAGGCCGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCAATTAGCCGCGGATGAGCCGCGCCCTGCCGCCTGCCCCTCGCGCGCCAGGCCGCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGCCGCGCCCTGCCGCCTGCCCCTCGCGCGCCAGGCCGCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGCCCGAGCGGTCGACGTAGCGATCGCTCCCGAGGCGGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGTCCAGGAATTCGCGGACGGTGCTTTCCCACCTCGCGCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAGCGCGAAAGGTCAGCGCCGCCCATGTCGAGCTCTTCGATAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGCGGCAATTAGCCGCGGATGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.10,-15.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 166508-161223 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000006.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 166507 29 100.0 32 ............................. ATCGGCGAGCGAATCAGACGACTGCGCGAAGC 166446 29 100.0 32 ............................. GCTGCTGCGCGGCCTCTCGATCGTCGCACGCT 166385 29 100.0 32 ............................. TAGCGCCGTTCTCGCCCGCTATCGGGGCTGAA 166324 29 100.0 32 ............................. CCGCCACCGGCTACAGCCGCAACGCGATCCAC 166263 29 100.0 32 ............................. CCTCCGGCTACCGCTACCGGCTCCAGAACAAC 166202 29 100.0 32 ............................. TCATTTTGCACGCATGAATTTTTCTCAGAGTT 166141 29 100.0 32 ............................. CTCGGCGAGACCTTTGCCCCGCTCGCGGTAGT 166080 29 100.0 32 ............................. CCGTCCAGGCAACTGTCCAGATCACTGCAAAA 166019 29 100.0 32 ............................. CTCAGCGGCATTTCCGACCGCGGGCCAATGGC 165958 29 100.0 32 ............................. AAATTGCACAATTTTGTAGTCCTCGATGAGAG 165897 29 100.0 32 ............................. CGCGTCGAACTGCGCTTTCATGTCGGTCGTCG 165836 29 100.0 32 ............................. CGGTCGGGTTCTGAGGTAGGGGATTGGGTTCG 165775 29 100.0 32 ............................. TCATTCTGCCTGCGCTTAAAGCTTATCGCGAG 165714 29 100.0 32 ............................. TATTCCCGCTGGCGCCACTTTCACGTCTGAGC 165653 29 100.0 32 ............................. GCCGCTTGGGTGGGCCGCTCGATCCGCCCGCC 165592 29 100.0 32 ............................. CTCCGCCACCAGTCGGGGTCATAGCGGGTCGG 165531 29 100.0 32 ............................. AGCGTCGCTACCTGAGCGCAGAGGCATCCGCC 165470 29 100.0 32 ............................. CCCCACTCAGGCAGCCGGTACAGCACGTCGTC 165409 29 100.0 32 ............................. CGTTCGTTCCCCGAGCAGTCGCTGCGGATGCT 165348 29 100.0 32 ............................. GCCCTGCTATTTGGGTGCGTGGGCGCATTTCT 165287 29 100.0 32 ............................. CCTATCGCGAGGTTTGGACGAATATTCCGGTT 165226 29 100.0 32 ............................. CAACCTCGAGCGTCCGATAGTAGGAGCCAACC 165165 29 100.0 32 ............................. ATCTCGGTACGGGTGCACACGCCGGTGGCGGT 165104 29 96.6 32 ............................T GTGCCATGCGCACCGCACACGCCCGCCCGGCC 165043 29 100.0 32 ............................. GTGACGGTGGAGGACGACCCCGCCGCCCGCGA 164982 29 96.6 32 ............................T CCATGCGCAGCAGCCCCGGCAGGTGGAACAGG 164921 29 100.0 33 ............................. GCACTCTTCGCCGCGCTGCCCATCCCGGCCCAC 164859 29 100.0 32 ............................. CCGACGCCGTATCCCTCGGTCTGCCAGTAGGG 164798 29 96.6 32 ............................T CGAGCTGCCTGGCGATGCGCCGGTGATCGCGC 164737 29 100.0 32 ............................. GCGACGGTGAGCTTCCTGGAGTTCGTCGAGGG 164676 29 100.0 32 ............................. CCTCGGGGTCGAGCAGGTCGAGGTAGCGCCCG 164615 29 100.0 32 ............................. CGCCGTCGATACGGCATTCCAGTGATCATCGA 164554 29 100.0 32 ............................. AGCAACACCTACGGCTGGCTCGGGCAATTCCC 164493 29 100.0 32 ............................. GCGAGCTGGCCGGCGGCGTAGTTGACCGTGTA 164432 29 100.0 32 ............................. GGCCGTCAACAAGCGCTCAAACGGCCCTCGAT 164371 29 100.0 32 ............................. GCACACCTCCGGGCGGTGGCCACCGGTGCGCG 164310 29 100.0 32 ............................. ATCCGCGGCAACCTGGGGCTGGTGATCACCGG 164249 29 100.0 32 ............................. TAGTCAGTGCCGCTGATCGTGGCGGTGTTGCC 164188 29 100.0 32 ............................. CCGGAGGAAGGAAATAGAAACCGGCGTGGCCG 164127 29 100.0 32 ............................. GCCTGGGCGTCATCGGCGCCCGCCCCGCCCCC 164066 29 100.0 32 ............................. GAGATCTGAGCCGTGCCGCTCATCGAAACCGA 164005 29 100.0 32 ............................. CTCTGGCGAGTGCGCGCGACACCTCGGCGGGC 163944 29 96.6 32 ............................C AGTTCAAAATCACTCGGACCCATGATCAAGCC 163883 29 93.1 32 .............A....A.......... AGTTGCCGGAATCTCCGGCCGGTGATCCGGTA 163822 29 96.6 33 .............A............... CTCGGCGACGACCTCTTCGACGCCGCCATGGCC C [163813] 163759 29 93.1 32 .............A...A........... CAGTTTCAGCAGGCGGTAAAACGTGGGCTTGG 163698 29 96.6 33 .............A............... CGCAACGGCAACCCCTACAGCCGCACCGCCGTC 163636 29 96.6 32 .............A............... CCGGCCAGGACGGCCTGCTCAGCACCAGCCGC 163575 29 96.6 32 .............A............... ACCCAGCTCGCCCTCACCGACGAGAGCTACCG 163514 29 96.6 32 .............A............... CGGCCACCTGCTCGCGCAGAGCGAGCTCGCCC 163453 29 96.6 33 .............A............... TGGGGCGATAGCTCGATCTTGAGATGCGCGCCG 163391 29 96.6 32 .............A............... GCTATATCCGGGCTGTCTTTCTGGAACTGCGG 163330 29 96.6 32 .............A............... GCTAGGCTTAATTGATTTCCGCTGTGCGGAAA 163269 29 96.6 32 .............A............... CCATGCGCCGCGGAAAAGTCGGTCGCCAGTTG 163208 29 96.6 32 .............A............... AGCAGCCGGGATGACGAGCCAGAAAATCGGAC 163147 29 96.6 32 .............A............... CAATTCGCGCTCATGCGTGCTCGCAGCGACGC 163086 29 96.6 32 .............A............... CGGCGAGAATCGGGGCGACCTGCTCATACAAT 163025 29 96.6 32 .............A............... CGCCTCTCATCCAGGCATTCAGAGGCATAACC 162964 29 96.6 32 .............A............... CCATGACCACGCCCTGCGCCGCCGGCGGCTAC 162903 29 96.6 33 .............A............... CGAGCTGCTTGTCCTCGCGGCAGGCGTTGAAGA 162841 29 96.6 33 .............A............... CACTACACCGGCGTCGTCGGCAGCGACCTGCGG 162779 29 96.6 32 .............A............... CTCGCCGAGCTGGAGGGCGAGGTCGCCGCCTC 162718 29 96.6 32 .............A............... GCTTCGGCGATCAGCGCGTAGCGCTGACCGCG 162657 29 96.6 32 .............A............... ACCTCGCGGTCTACGTGCTGCCAGAGAAACCC 162596 29 96.6 32 .............A............... ATCGTCGGCGGCATCGAGTACGACCCCATCGG 162535 29 96.6 32 .............A............... AAGCAAGGGCGTCGCGGCTGCCGTCTACGGCA 162474 29 96.6 32 .............A............... GGCACCGATGCCGCCAGCATCATCACGACCCG 162413 29 96.6 32 .............A............... CCGGTGGGAGAGGCAGCGTGATGGCCTACCAC 162352 29 96.6 33 .............A............... GGGCGTCGCGTGCCCGTATTGGGCCCCGCAGTC 162290 29 96.6 32 .............A............... GCGGCAGATTTTGCCTCCCCCCCGGCAAAATC 162229 29 96.6 32 .............A............... GCCCTGCCGGCCGCGCCAGTTGTAGGGCATCG 162168 29 96.6 32 .............A............... CGGCGGATCGCGTAGTAGAAACACTCGCCGTC 162107 29 96.6 32 .............A............... ATCCACCTCGCCGCGAAGGATCTCGCCCTCAC 162046 29 96.6 32 .............A............... GCGGCGAGCGTGTCGACGCCCGCCGGCCAGTG 161985 29 96.6 32 .............A............... CCAATGCCATGCGGCCGGCGCCGCCGCGACGG 161924 29 96.6 32 .............A............... CCCCGGATCGCCGCCGGATCGGTCAGCCAGGT 161863 29 96.6 32 .............A............... AATGTGCGGGATCATTCGTGCTCCTACGCCGC 161802 29 96.6 32 .............A............... GCCGAATGCGTGAGGTCCGAGAACCGCGTGAG 161741 29 96.6 32 .............A............... ACGGCGCAATAGATACGCCGTTCGTGATAGGA 161680 29 96.6 32 .............A............... CTCGCCTAGGGTTTGGTGCCGCCCGGCGCAGC 161619 29 96.6 32 .............A............... GCGGTGACGCGCCGCGAGGTCGATCTGGTGGC 161558 29 93.1 32 .............A..............C AGTTCAAAATCACTCGGACCCATGATCAAGCC 161497 29 93.1 32 .............A....A.......... AGTTGCCGGAATCTCCGGCCGGTGATCCGGTA 161436 29 96.6 33 .............A............... CTCGGCGACGACCTCTTCGACGCCGCCATGGCC C [161427] 161373 29 93.1 32 .............A...A........... CAGTTTCAGCAGGCGGTAAAACGTGGGCTTGG 161312 29 100.0 32 ............................. CGCGACGGCCAGCAGTACCGCCGCGCCTTTCC 161251 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 87 29 98.0 32 CCGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : CCTCGCCGCCGGCGAGCTGCCGGTGCCGCCCCCGCCCGAGGACGCCATCGGCCCCGCCATCCCCAACCCCGAGAGCCTGGGCGATGCTGGTCATCGTGCTTGAGAACGCCCCGCCACGCCTGCGCGGGCGCCTCGGCGTGTGGCTGCTGGAGGTGCGCGCCGGCGTCTACGTGGGCGACTTCTCGCGGCGCGTGCGCGAGATGATCTGGGGGCAGATCGAGGCGGGGCTGGAGGAGGGCAACGCCGTGATGGTGTGGACCAGCAACAACGAATCCGGCTTCGACTTCCTGACCCTGGGCGCCAACCGGCGCATGCCGGTGGACCTCGACGGCCTGCGGCTGGTGGAATTCCTGCCGCCACCGAAACCCGACGCTGCTCTTTGAAAATCAGGAACTTGTAATCCAGACTCACGCCACCGCCGCGCCCTCCGGTTCGGGCGTTTCGTCGGTGGAATTTTCAGCCTCCTTTTTCGCCTTGTCTTTCAAGGGGATGGAGGAAGT # Right flank : CCCGATGCGCTGGCGCGCCCGCTGGCCGTGTACTGGGATGCGCAGGACGAACGCCTGCTCTATCTGCTGACCCCGCCGACGGCGTCGGGCCGAAACAACCGCGGCTGGTGGTGCATCTCGACTTCATGGCCGGCAAGGCCGGCACCTTGAACTCGGTGCGCTCGGCCTTCCACATCAACCCGCAGGTTTTTGCGGACCAGAACCGTTTCGATCGCATCAGGTAGGTGCGCAGGTGGGAGGCCGGCTGTCCCTCCATCCCCAAGTGCCGATGCGATGGCCTTTGGTTGAACGGACGCCGAAAATTTCCGTTCGTCACCTGCGACTACCCCGAGCATAGCCCATGACCGGCACCACGATCACTCTCACCGTCGATGACCGCGCCGTGCGCCCGTTCCCCGCATGTGCGGGGATGAACCGTCCTTGTACTCGCAGGCGAGGTCCTTGGTCTGCTGCTGCAGCCGCGCGAAAGTGTCAAGCCTCGTAAGCTGCTGCCTGAGCGT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : CCGTTCCCCGCATACGCGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 104593-89877 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000013.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_113, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 104592 37 100.0 36 ..................................... GCGTCGCCGCGCTGATATGGTCGGTGGTGACCAGCC 104519 37 100.0 35 ..................................... TTATCGCGCGCGGCAACCATCTTGTCAAACATTAT 104447 37 100.0 36 ..................................... CAAGCGAGCGCGCATCGAACTTGTAAACCCCGTTGT 104374 37 100.0 32 ..................................... GGTGCTGGCGTAATATGGTACGCCGACAAGAA 104305 37 100.0 34 ..................................... GCTTGCCAGTAAACACCTTGGTCGCCACGATGCG 104234 37 100.0 34 ..................................... AGTTCGCCGTCGGCGAGGTCGACGGGCCGCTCGC 104163 37 100.0 34 ..................................... GCCGTAGAGCTTTTGCCCCGCGGCCCCCTGCACG 104092 37 100.0 34 ..................................... GATCGCGGTCGCCCCATCGCCGCTACTGCCAGTC 104021 37 100.0 35 ..................................... CTACCTCAAATGGGCAGGGGGGCAGATTGGTTAGG 103949 37 100.0 34 ..................................... CGACCCACCAGCTCCATCCTTGGAGTGTCCCGTA 103878 37 100.0 35 ..................................... GTGGCCATCTTGCATGCACTCTCTGTCCCACCAGA 103806 37 100.0 33 ..................................... GCGATGGCGAGGGATATGTCAAGGCGGCCCTTG 103736 37 100.0 34 ..................................... CCTTGTGCGCTGGCGTATTGTTTTGTGCCACCGC 103665 37 100.0 34 ..................................... GCCACCAGCTTAGCGGCCTTCTTCTGCTTACGGC 103594 37 100.0 35 ..................................... GTCGCGCGGTGGCGTAATCCGCAGTCACCGCGAGA 103522 37 100.0 35 ..................................... CCGCTAGCCGCTAGCAATACCTTTTCAGGTACGCT 103450 37 100.0 34 ..................................... CTTCGCCAGCGTGCTTTTTCCGCTGCCGGGTAAC 103379 37 100.0 34 ..................................... ATCTCCCGGCAGTAGTACCAGAACACAACCAATT 103308 37 100.0 34 ..................................... CCGGGCTGATTACCGGTTCGGACCGCTTGCGAGT 103237 37 100.0 33 ..................................... CTTTGCGCTCATACAAAGCAGCGTAAGTTTTGA 103167 37 100.0 36 ..................................... CTTGACAACGAGTGCACGTTCATCGTCCGTGGCGGC 103094 37 100.0 35 ..................................... GGACTTCTTCCTGCCGTTCACGACGCACGGCCAGA 103022 37 100.0 35 ..................................... GCTTCGAGAATGCGCAATCTTCATCAATCATGTCA 102950 37 100.0 35 ..................................... GCAGTGAAGTGATCATCACTCACCTCCCGAATTGC 102878 37 100.0 34 ..................................... TGCCATTGTTGCTCTGTTGCTGTGCGGTCATGTT 102807 37 100.0 35 ..................................... CGCAGGCTTGTCTGCAACCTGAGTCTGTAGCTTGG 102735 37 100.0 34 ..................................... GCCGTAGTACTGGCAAAGCCCAGTGACGTTCCCT 102664 37 100.0 34 ..................................... CAAACCATGGAGGCGATGCGTGCTTCAGCCCATC 102593 37 100.0 35 ..................................... GGTCTTTGCCAGTGACATTTCCCTTGTCGTCGCGT 102521 37 100.0 33 ..................................... GCGTCAGGTTGATGATGGGCATGGATCAGACTC 102451 37 100.0 33 ..................................... GCGATCCGCCTCGCGTAGTCGCCGACGGTCTCG 102381 37 100.0 32 ..................................... CTTATACTCAGGCATGTTCGCCCCCCGCTACC 102312 37 100.0 35 ..................................... TCCGGCACCGTGACGGAGACGGCGCCTGGCTGGGT 102240 37 100.0 33 ..................................... ACCTTTCCGCCCGGAAGGCCGATTGCGCCCGGA 102170 37 100.0 35 ..................................... TGATGGCAGCGGAGTCGAGCAGCCCTTCGATGTCG 102098 37 100.0 35 ..................................... GTGCCCCAACATGGGCTGACGAAAGTAGACGGGTT 102026 37 100.0 30 ..................................... TCGACGGATCGAATAAGTCGTCGATCACTT 101959 37 100.0 35 ..................................... CCTGCGTCGATCTCAAACTCCCCCGAGGGCAGCTT 101887 37 100.0 35 ..................................... TTGCTTTTTGGCAGGCACCCGCACGACTTTTTTTT 101815 37 100.0 35 ..................................... CTGGTCTTTGCCAGTGACGTTCCCCTCATCATCGG 101743 37 100.0 34 ..................................... CACCACTTCCGGGCCGCCTCGCGGGCGACATCGT 101672 37 100.0 32 ..................................... GGGCGACATCGTCGCCCTCCACGGTGCCCGCG 101603 37 100.0 37 ..................................... GCACGGTGGTCGTGCTGCTGGTACGCCGTGGTGGTTT 101529 37 100.0 35 ..................................... CGCTTTGATCAAGACTTCCGTAGGCAGAACACCGC 101457 37 100.0 36 ..................................... TGTCCATCGGGGGCTTGGGCGCGAACCGTCACCAAC 101384 37 100.0 35 ..................................... GCAGCGTTCGCGGAAGGCGTCGGTCGTCCATGTCC 101312 37 100.0 34 ..................................... GAGGATAACGAGCATGAACGCACAACAGCAGAAC 101241 37 100.0 34 ..................................... TACTCGGTGCTCGCATAAAACGGCGAGCCGGCGA 101170 37 100.0 35 ..................................... CCTTGTCGCACGGCGCAATCCATACGCCGTGGGGA 101098 37 100.0 34 ..................................... CGCAGTGAAAGGGGGACTCATCAACATCGCGAGC 101027 37 100.0 33 ..................................... GCCGGGATGGCCTCCACCTCCGCGCAGAAATCC 100957 37 100.0 34 ..................................... CAGGTGAGCGTGACCGTCTCGGCCGCGGTGGCGG 100886 37 100.0 34 ..................................... GCAAGGGAGCGGGGCGGTCATGCGACCCGCTCCG 100815 37 100.0 35 ..................................... ATCTCGCCCAGCGTGGACGCCGCCCACGCGAAGTC 100743 37 100.0 34 ..................................... TGGGAAACCGGCTGCGGTGCCGCGCTTAGCGCGG 100672 37 100.0 35 ..................................... CTTTGTCAAGCGGCACAGCTTCGACTTTAATCAGC 100600 37 100.0 36 ..................................... CATGCACATCTGATCGGCAGTGGCGTCATGCTGAGT 100527 37 100.0 35 ..................................... AGCCGAGAAATTTCATAGTTCCGTTCTCCACAAAC 100455 37 100.0 35 ..................................... GCAAGCTCGATGGATACTGCGAGAACGCCGCTGTT 100383 37 100.0 35 ..................................... ATTCAGCAACCAACATACTGCCTAGCAATGCTACG 100311 37 100.0 34 ..................................... GGCGTTCACGCAGCCCGAATCTCAACGCCCGTCA 100240 37 100.0 34 ..................................... CATTCGGCGCGCGGAACCGCGCGCCTATAGACAA 100169 37 100.0 36 ..................................... GACGGTCTCGCGATCGTTTAAAGCCGCGTTTTCTTT 100096 37 100.0 33 ..................................... GCACGTCGGCCATGTATTCACCGCCCGGATGCG 100026 37 100.0 34 ..................................... GCGCATTGCTTGCCGAACGGAAAAGGCGGGCACG 99955 37 100.0 34 ..................................... ACCGTTGATCAGAATGAAGCCCGCTAGAGTCAGC 99884 37 100.0 32 ..................................... CCACGCCGCCCTTGTTAAGTTAACAGCTTACA 99815 37 100.0 35 ..................................... CAACCAATTGCGCGGCATTTTCCACGATCCGATAG 99743 37 100.0 34 ..................................... GTGCGCAAGAATTCCTTGTGCACCGGCGTATTGT 99672 37 100.0 32 ..................................... ATCGCCAATAGGCGAAATAGGCAAGCCGTTCG 99603 37 100.0 33 ..................................... ACCGCCGCTTCTGCAATAGCACCGGCGCGCGCG 99533 37 100.0 33 ..................................... GCGCGTCCGCATCTTCATCGAGCAGCCTGACAC 99463 37 100.0 35 ..................................... CGTAAGCGCTGGTGGCAACGGACGGCTCCATCTTC 99391 37 100.0 36 ..................................... CGCCCCTTCCGCGTCCAGGCCCTGGTCGGCGACCCT 99318 37 100.0 36 ..................................... AGTGACACTCACGCTACATGATGCAGGGTAGCGTGT 99245 37 100.0 33 ..................................... GCAAGAAACCAGGACAAGTAAAACCCGAGAGCC 99175 37 100.0 33 ..................................... GGAAGGAGGGGCGGTATTTCCCCTCCACGTGCA 99105 37 100.0 34 ..................................... CACCAGTTTTGCCGCCTTCTGCTTCGGAGCGTGA 99034 37 100.0 35 ..................................... GCTGCGATTGCAGCAACTGCTGCCGCCTTCCGTGC 98962 37 100.0 35 ..................................... GCGGTACTTGCCCTCAATGTGGATGGTGATGTTGT 98890 37 100.0 35 ..................................... GCGGGCGCGCCGTGCAGTCCAGCGTTTCGATGATC 98818 37 100.0 35 ..................................... GTGCTATCCGTGGTGACCACGGCGGTCGGCATGTT 98746 37 100.0 35 ..................................... AGGTGCAACTCACTGCACCCCGCCGCCCAGAGTGC 98674 37 100.0 34 ..................................... CCCGGCAGCGCCGCAATGTGGGTTGCGATAGCCC 98603 37 100.0 35 ..................................... CCGTGCGGCGCGGATCAGGTCCAGCCGGTGGGGCC 98531 37 100.0 34 ..................................... AGGTGCATGGGGTCACATCGCACAGCGGGGCGCA 98460 37 100.0 35 ..................................... GCGGGGAATCATGGCGCCTCCAGTCGCATCTGACT 98388 37 100.0 33 ..................................... GTCCGTCGGCAGTAGCACTCTCACTTCGATTGC 98318 37 100.0 34 ..................................... AGTTCTCCGAGGACTACACCGACTTCCTCTCCGC 98247 37 100.0 36 ..................................... GATTGCGCACGGCGGGGATGCGAACTGCGGGCTTGG 98174 37 100.0 34 ..................................... GCCCCGCCGATGTCCAGGGCGAGGGCAAGGGTCC 98103 37 100.0 34 ..................................... CCGCGAAGGCGGCCGACGCCCAACTCAGCTTGGC 98032 37 100.0 34 ..................................... ACATTATTTTCGCGAAGGCTAGCACCAGCGGAAC 97961 37 100.0 35 ..................................... GCCTCGCGGCGCCTGAATTTTGCACAAGTGGCAAA 97889 37 100.0 35 ..................................... GCCAAGTCGGCTGCCGCTGTGTTCGACCTGCAGGA 97817 37 100.0 34 ..................................... GGTTGCGGACGGTCGGGGTGCGGACGACGGCGGG 97746 37 100.0 36 ..................................... CCTCGCAGTGGAATGGTGATTCATCAACGTCGGCCG 97673 37 100.0 36 ..................................... TATGCAGCGCCCTACATAGTCATTTGCATCCGTGCG 97600 37 100.0 35 ..................................... CCATACTGCCGATTGTAAGCAGCAGCAACGCGGTG 97528 37 100.0 34 ..................................... GGTAGCGCTCGCGGTGATCCTCGATCCTGTAGGT 97457 37 100.0 34 ..................................... CACCCAGAAGGTGCGGACTAATCGTGCGTCGAGC 97386 37 100.0 35 ..................................... ATCTGCCGCCGCGAGTATCATAAATCTCGCCGACC 97314 37 100.0 33 ..................................... CGCTATCGCACCCCCATCGCCATCAACTGCTTC 97244 37 100.0 32 ..................................... CTTGCGCCTCGGAAAACGCGGGTACGCGCATG 97175 37 100.0 34 ..................................... GCGAGTTCCGGGGAGCTAATCAGGCTGGTGAAAC 97104 37 100.0 35 ..................................... GCCGCGGGCGAGCCAGACGCTGCCGTTGTCGGCAA 97032 37 100.0 32 ..................................... CCGCGAACCGCGAAGAATCGAGCAGCGTAAAA 96963 37 100.0 34 ..................................... GAACCATATCGTTGTCATGCTAGACACTCCCCGC 96892 37 100.0 35 ..................................... CCCCGGATGGACCATACCCCTTTGCCAGCCAGACG 96820 37 100.0 35 ..................................... TCCGCCTGCATGACGGGCGTTGCATCGCCGAGTGC 96748 37 100.0 34 ..................................... GTTTTCACGCCGCGCGGATTTCGTGCCCAAGCAT 96677 37 100.0 33 ..................................... GCGGCATAGCGCATAGTGTTACCTCCTATCGCC 96607 37 100.0 36 ..................................... CCTCGGCGAGCGCCGAGGCTACGAGCCCTTCCTTGG 96534 37 100.0 35 ..................................... GATGGTGCCGCCGTGGGTCTCCATCCACCGGATGG 96462 37 100.0 35 ..................................... GGCCATCTCGGCCTGTACTGCTGCCAGATGCTCTT 96390 37 100.0 36 ..................................... GTTTCGGAAGCCACTAGAGCAAACCTCGCCCAACGT 96317 37 100.0 34 ..................................... TGCATCGTGGCATTCGAGCCAGACGGCACGGATT 96246 37 100.0 32 ..................................... TCGGGGCGCAGCAGACCCCGCCCCGCCAATAC 96177 37 100.0 34 ..................................... GGCACAGCCCTTCCAACGCCAGCGCCTCCGCGCT 96106 37 100.0 35 ..................................... GAACTCCACCGAGTGGATCTCGTCGGCGCCGCACC 96034 37 100.0 34 ..................................... GTGCGCGTCGCTGCGGACGGCGACAGCCGAGTAG 95963 37 100.0 35 ..................................... GTTTCACCCCGCCAAGTGCCTGCATTGGAAAGAAA 95891 37 100.0 35 ..................................... GCCTGCAGGAAGGCCGAGTCGAAGCCGACCTCCCG 95819 37 100.0 33 ..................................... ACGCACCGTAGTGCAAGCAAAGCAGTAATAGTG 95749 37 100.0 35 ..................................... AGCTCCTGTCTTTGATACCAGCGCTGACGCACTGC 95677 37 100.0 33 ..................................... GGCTTGGGCGCGGACAGCCCTCAGCGGGCCGAC 95607 37 100.0 33 ..................................... GCAAAGAACTGCGGGAGGTTCAGGGGGCAGACT 95537 37 100.0 36 ..................................... GCGGCCTGCAGCAGCGGCTCGCCGTCGCTGCCGTAG 95464 37 100.0 32 ..................................... TGTTCCCCCGGTCTGTCGTCTCGCGTGGGGTC 95395 37 100.0 33 ..................................... TACACCATGTCGTCGGACCACTCGACGCCCCGG 95325 37 100.0 35 ..................................... CGTTCAACGCCGCCAATTCCGCGCAACTGATCAGC 95253 37 100.0 35 ..................................... GCGCGCTCTCGCGCAGGCGAGAGAGCCCTTCCAGC 95181 37 100.0 34 ..................................... CCTTTTCCGAGCCGCAAGCCGTTCGGCTTGCCCA 95110 37 100.0 35 ..................................... GGTTCTTTCTGGTCAAGTTCAGCATCAGTATCATC 95038 37 100.0 36 ..................................... CAGTAGAAGGCTGTCATTCCACATGCTGATACATGC 94965 37 100.0 35 ..................................... CCATCGTCGGCAACGACAATGGCACCTCCCGTGAA 94893 37 100.0 34 ..................................... ACTTGTTAGGGCGTGTAGTGATCATTTCGCATCC 94822 37 100.0 35 ..................................... CTTATTGGGCCGCGTGGTAGCAGCGAAAAACCTTT 94750 37 100.0 35 ..................................... GGTGAACCGTTAGCAGTCTCAACATCTCTTGCGAT 94678 37 100.0 35 ..................................... CTGCGTGAGGTCCATCCGATGGACCTTAATTCCGC 94606 37 100.0 35 ..................................... ACAGCCAGTTCCATCCATGCTCCAGGGCCTCTTCC 94534 37 100.0 35 ..................................... CGTGCGATGAATCCACAACTGTACCGTCAAGATCA 94462 37 100.0 33 ..................................... GCGATGGCGGTCAGTACCCCCCTCATCAGCGCG 94392 37 100.0 35 ..................................... CTACATCGAGGATATCGACGTCGAATCCTTCTTCC 94320 37 100.0 31 ..................................... GAACGGTAGCGATACTCGCAACAATCGTTTC 94252 37 100.0 34 ..................................... GCTCTATCTCCAGTATACGAAAGCGGCTAGCCGA 94181 37 100.0 34 ..................................... CAAACATAATCCACGGCGTCATTCTCGAAAGAAA 94110 37 100.0 33 ..................................... CCGTTCTTATAAAACACCCCGCCGTCGTCATGG 94040 37 100.0 33 ..................................... CCACACCGTCGCGAGGGTGTGGCTTACGCTCAT 93970 37 100.0 35 ..................................... ACCTGTTCCGCAGTGTAGTTCGGAGCCTTTTCATT 93898 37 100.0 35 ..................................... GGTGAGAATCTCCCCGTTATCGCCGAGGTAGTTGA 93826 37 100.0 34 ..................................... ATGCAGCGCCCTACATAGTCATTTGCATCCGTGC 93755 37 100.0 34 ..................................... GAATACTCGGTGCTGGCGTAGTACGGACTACCCG 93684 37 100.0 33 ..................................... ATGCCAGCCCGCGCCGTGCTAGCAGTACCTTTT 93614 37 100.0 36 ..................................... TCGCCGTCGAACGCTTGCCAGCGGTCGCGCATGCGG 93541 37 100.0 32 ..................................... TTGTCCGGGCGACTGGTCGCGGCGAAAAATCG 93472 37 100.0 33 ..................................... CCGTCGGGTGCTCCGACGTGTTTGTGATCCTTG 93402 37 100.0 34 ..................................... GCCGACAAGCACGCGCGTCGCGACGAAGCGCGCG 93331 37 100.0 34 ..................................... GACTCAAAGTCTAGCGTATCGTGCACAACCTGAT 93260 37 100.0 32 ..................................... GCGTCCTCCACACGGCCGCGGTACTCGAACAC 93191 37 100.0 34 ..................................... CCTTTACGCCCGCACGCCTTCTGGAAGCGGGCGG 93120 37 100.0 34 ..................................... ATCTAGGTCGCCACGTCATATTAAGTATCTCACT 93049 37 100.0 35 ..................................... GCGCTAAGCGCGGCAAGTTCTGGACAACTGATAAG 92977 37 100.0 35 ..................................... TGATTCCGCGCGCGAAAAGCGCATCGACCAATGGG 92905 37 100.0 35 ..................................... CTTGCACTCCCAATACATGCCAAGGGCATGGAAGC 92833 37 100.0 30 ..................................... GAGGAACCCGTAGATACGCTGCAGCTCGTC 92766 37 100.0 33 ..................................... ACGCCACAACCGCTGGTGGACCGCGCCGCCGCG 92696 37 100.0 35 ..................................... GAATTCCATACTATGTTCCCTCCTGAATCAGATCA 92624 37 100.0 33 ..................................... TGATCAGACTGGTGAACCCGGATACTTTGTAGG 92554 37 100.0 36 ..................................... CGTGGCGTGTCGGTCGGTGAGACGCATGAAACGTTT 92481 37 100.0 33 ..................................... GGATCGTTCCGGTCCACCCGTTGCGGGTGGCGA 92411 37 100.0 37 ..................................... ACACGATTTGTGGTGCATAACCATTGCGCCCAATATG 92337 37 100.0 34 ..................................... CGAATGCTTCGGATTGAAGAACAAAATCTCATCG 92266 37 100.0 34 ..................................... GCCCCCGGTACTCAAACACCGCCTGCGGCGGCAT 92195 37 100.0 33 ..................................... TTGTGTTCCTTCTCGTTTGCACGTTGGTCGATG 92125 37 100.0 34 ..................................... TTTCGTTTCTCATAATATTTGAACTTACCTTCGT 92054 37 100.0 34 ..................................... CCTAGAGCCGTGTGAGAAACAGGCTGACTGGCGG 91983 37 100.0 34 ..................................... CAGCAAAAACGCTGCATACCTGTAATTGTTCAGT 91912 37 100.0 34 ..................................... CAAAACACGATTAGCGGTTCTGCATCACCATTCT 91841 37 100.0 34 ..................................... GCTAACCAGCGACGTAAACCCGCAGACCTTGTAC 91770 37 100.0 34 ..................................... ACCTTCGTGGCGACGAAACGCGCGCGCTTGATAG 91699 37 100.0 33 ..................................... CGCGTCCGCATCTTCATCGAGCAGCCTGATACG 91629 37 100.0 34 ..................................... CGTAAGTCTTGACGACAAGCGCGCGTTCGTCGTC 91558 37 100.0 34 ..................................... CCAGCAAAAACGCTGCATATCGCATAGCTCTTCC 91487 37 100.0 34 ..................................... ATCAGCACCACGCTTCATGCTTTCCACGTTTGCC 91416 37 100.0 35 ..................................... CGCGGTAAATAACGACGGCCTTAGTGCCGCCGGCC 91344 37 100.0 33 ..................................... ATCACCAAGCGCGTCGATGAACCACTGCGTTGC 91274 37 100.0 34 ..................................... CCTTACGCTCATACAAAGCAGCGTAAGTCTTGAC 91203 37 100.0 36 ..................................... ATACTCGCTGCCGGCGTAGTACGGCGCGCCCGCGAA 91130 37 100.0 35 ..................................... TCGCCTTGGGCTGGCGCTTGCGCGCCGGGCCCTTC 91058 37 100.0 35 ..................................... AACCGGGCCGCGGCCGTTGTTGAGCGAGGCGGGCT 90986 37 100.0 34 ..................................... GCGGAAATCAGTTAAGCCGAGCCTTGCGGACGAC 90915 37 100.0 34 ..................................... CAATGGTCCAACACGAACTTCTCGGAGGCGCCCG 90844 37 100.0 35 ..................................... AGATTGATAATAAGAATCCGGCGGCTTTGTTCTTC 90772 37 100.0 34 ..................................... ACTCGGCCTTCGTGGGCCGGTCATACGACGTGTC 90701 37 100.0 36 ..................................... CCGTGTGCGGGCGGTAACCCCACGCCAGCCATACCG 90628 37 100.0 36 ..................................... GAAATCGACGCTATCAAGCGCGTCGAGGAACCACCG 90555 37 100.0 34 ..................................... ATCACCTCGTCGGTCGCCGCCGCGAGGGCCTCAG 90484 37 100.0 35 ..................................... TCTCAACTTCCTCGCAATGCCGTCGGCGGGCGATG 90412 37 100.0 34 ..................................... GCGATCCGGTGCTCCAGTTCGGCGCGCACCGCGG 90341 37 100.0 34 ..................................... TTTCCGGCTGCAATCGCTTCCATGCGCTTGACCA 90270 37 100.0 34 ..................................... CGCGCGGCCGAGACGATTGTGTCGGTCCGGCCCA 90199 37 100.0 34 ..................................... CCGCAAAAAATCTTTCGCTGTGTCTGGATATGGC 90128 37 100.0 34 ..................................... GGACCTTCGGGGTCCATGTCGATTTCCAGCAGCT 90057 37 100.0 35 ..................................... GGGCGGGGCTCGCTCACTGTGGGCGGTTTAGCATG 89985 37 100.0 35 ..................................... CGCCTTCGGCCCGCCAGAACCTCACCAGCCGTTCC 89913 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 207 37 100.0 34 GTTTGAAACACTGCCCTGATGAAGAAGGGATTAAGAC # Left flank : GCGACCATGGGCGCGCGCCTGTACCTGATCGCCTACGACATCGCCGACCCCCATCGGCTCGCGCGCGTGGCCCGCTGCCTGGAGCGCATCGGCACGCGCGTGCAGTACTCGGTGTTCATCGCCGAGCTGACGCCGGACGAACTTGCCGACGCCATCGCCGACCTCGCCCGCCTGATCGACCCGCGCGAGGACGACGTGCGCGCCTACCCCCTGCCCCACGTGGTCGATGCCGCCCTGCTCGGCCGCCAGATCTTCCCCGACGACATCCTGCTGCTGCGCGACGGGCGCAACCTGCTGCGCCTGGGGCCGAAGGCGAAGCGCCCGCATCAGCGCGAACTCTGGCGCTAGCCGCGCCATCCGCTACGCTTCTACACTTCGTACCCCACCACCGAGGAACCCTGATGCTGCGACGCAATAATAGGTCATCTCCGAAACTATCGGCCGGCTTTGGCAACCCCCCTTGCAACCCCTTGTTTTTGGAGCGTTTCTGGCGTCGAGGG # Right flank : CCCGTCATTTTTGTTGGTGTCCATCTCTAGCTCCATTTGCTCCCGGCGCGCCGCTGCCGACCCCCGGCAGTCCGCTCGCCGTAAGGCAGTCATAGTAGCGACAAATTTCTGGCTTGTTACAGAGAGGTTCGGATTCAGCGCTTTTCGTGCGCCGGATTATCGGCGCCGTTCAGCCCTGGCAGCGCGTCATCCACCGGCATGTGCAGGATGCGCGTGATGCGTTCGATCTCCTCGGGCGCGCCGCTGGCGATGCGCTGGATCAGGGCCAGCCGCATGTTGGCGATCTCTTGCGCGTCGGGCTGTTCTGCCGCCGCCGCGGCTGGTCGCTGCTTAAAGCCGACGCCAGTTGTCAGCCATTCAGTCGTTGTGCCGAGGGCTGCTGCAATCTCCGCGATGTATCGGCTCCTGCTGGACTTGCCTGTCGCCAGCTTGTGCACAGCGTTCTGACTGACCCCTGCAGCGTCGGCTAGCTGCGCCTGCGTCAGGCGCCGCGCTGTCAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAACACTGCCCTGATGAAGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 109579-114255 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWY01000008.1 Plasticicumulans lactativorans strain DSM 25287 Ga0310538_108, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 109579 37 100.0 34 ..................................... GGTGATGTGGTGAGCTACAAGGCCGGCGACGGTT 109650 37 100.0 34 ..................................... TTGTGCTTGATGGCACCTTCCGAAGCGCCACGAA 109721 37 100.0 34 ..................................... GTGACGACCGGACGACCATCCTTGACCGCCGAGA 109792 37 100.0 35 ..................................... CGCCCACTCACTGACCATCCGGCGCGGCGGCGGTC 109864 37 100.0 35 ..................................... TTTGATGCGCCGCAGCTTGCATCCAAATATCACCA 109936 37 100.0 35 ..................................... TGGAAAATCAGCGGCTTCAGCGCGCGCGACGTGTC 110008 37 100.0 36 ..................................... GCCTACCACCCCCGCACCGGTGCGGTGATGCAGATC 110081 37 100.0 34 ..................................... GCCGCCGAGGCCGATCCGGCCACCGGCACGCCGT 110152 37 100.0 34 ..................................... CAGCAGGCCCAGGCCGCCACGCCGACGCACTGGC 110223 37 100.0 34 ..................................... CATGCGCGGCGGCGCCGAACAGCGCGAGAGCGAC 110294 37 100.0 35 ..................................... TGGGCGGGGCGGGTGCCCCCCGTGGCGCTCAGGCC 110366 37 100.0 34 ..................................... TTCGTTGGCGCCGGCCAGCCACGGCGCTCCCGGG 110437 37 100.0 35 ..................................... TTTCGTTTCCGGGGGGCCGATGCCGCAGCACCGAC 110509 37 100.0 35 ..................................... TGGCAACGACACGGCGCACACGAGCAACGACAACA 110581 37 100.0 35 ..................................... GACATGCCGATGTTTTTGCCGACCGCCTCCTGCGT 110653 37 100.0 35 ..................................... GGCAAAGCGTCGGTGGCACGAGGTCGGTGCGTGTC 110725 37 100.0 34 ..................................... GCCGATCAGGCGATCCTGCTCGAGCGCGTCAAGG 110796 37 100.0 34 ..................................... TTCTGGTCTCTGTCTACCTCCTGGGCATCGGCGG 110867 37 100.0 36 ..................................... GTCGGCAACATCACGCCAGCGCGGCGCGCGCTCAAT 110940 37 100.0 34 ..................................... TACGCCGGGGCGCGGCCCAGCGCCGGGGCGGCGG 111011 37 100.0 35 ..................................... TGGTACCGGTAATGGTCGGTGAAAAATGCCTCCCA 111083 37 100.0 34 ..................................... AGTGCGAGAAATTGGTGAACATGCTTGAAACATT 111154 37 100.0 34 ..................................... GAGGTACTACGAATGACAACGCCCAACGGAAACG 111225 37 100.0 35 ..................................... TCAATGCGTCCGGCAGACTGCCATTCGGGCCATAC 111297 37 100.0 35 ..................................... CAAATAAATCGTCTCCACTTCAAAGTTATTCAAAT 111369 37 100.0 35 ..................................... AACGTCGGCATCATGACGCGATTGTTGCTGAAAGT 111441 37 100.0 34 ..................................... TGCGATATGCAGGGCTCCGCGGCGGCCGAGCAGG 111512 37 100.0 34 ..................................... AAATAACGCGCCACAAATTCGCCACGGAACCAAA 111583 37 100.0 34 ..................................... GGCGATGCGCCGTTCAGCCACCTGTTCCGGCTGC 111654 37 100.0 35 ..................................... ACCGTCACGGCCTTTCGGGCGCGGCTGGTCACGGG 111726 37 100.0 35 ..................................... GTTCGGGGTGAGCCAGCCGGGGGACTGGGTGCCGC 111798 37 100.0 35 ..................................... AAGGGCCGCGGGCGGTTGCTCGCGGCCAAGGTCAC 111870 37 100.0 34 ..................................... GACTGGTCCTCTGCGATCCAGGCCGATCAACCGT 111941 37 97.3 35 .............................A....... GGGATCGGCGCGAAGACAGGGGCCGCCGGCCTGGC 112013 37 97.3 33 .............................A....... CATCGGCTCGCAACGGCTGCGGCTATGCGCCGT 112083 37 97.3 34 .............................A....... TCGAGCTCGCCCATGCTCCACGGCTTGGGGATGC 112154 37 97.3 34 .............................A....... AGTCCATCGACCACCGTGTCTTTGGTGACGCCGT 112225 37 97.3 35 .............................A....... CCGGAGTTGACCGCCCGCGACACCACCCGCTGGGC 112297 37 97.3 36 .............................A....... AGCAACGACCAGGTGACCTACAAGATCCGCCACATC 112370 37 97.3 34 .............................A....... CTCTACCGCTTCGGGCTGCGCAAGGCGCTGATCG 112441 37 97.3 33 .............................A....... CGGAGGCGGCAGGGCGGCCGGCTCCGACGCGGG 112511 37 97.3 34 .............................A....... CTCTTAGGCGACACGAGCAAAAGGCGGCACTTGT 112582 37 97.3 35 .............................A....... ATCGCCGCCGTTGACGGCATCAGCGCTGGCCAGAC 112654 37 97.3 34 .............................A....... TGCTTGATCGGCTCGACGACCAGGTCGCCGTACC 112725 37 97.3 34 .............................A....... AAGTACGCGACCCGGCTGCAATCGGAGGACCGCC 112796 37 97.3 35 .............................A....... TGGGTCGGCTGGGTCTTTTGCCACGTCGTCGGCAG 112868 37 97.3 35 .............................A....... GAAATCATCGCGTACCACAGCGGCTCACTCAGCGT 112940 37 97.3 35 .............................A....... TCCGTCTTGGGCCGGGGCGTCAGCGCCCAGCTCAC 113012 37 97.3 33 .............................A....... GCCGGGCTGGTCGCCGCGGGCCGCGACGTCGGC 113082 37 97.3 33 .............................A....... GGTGCGCCCGCCTTCGAGCAGACCCCAGGCCTC 113152 37 97.3 34 .............................A....... CGCCGCGGCGAACCCTTCGACCCCGACACCCTGC 113223 37 97.3 34 .............................A....... TGCGGCTGGGTGGCGGCGCAGAAAGGCCGATCGT 113294 37 97.3 34 .............................A....... GCTGTTCTCGAACGACGTGATCACCTACAAGATC 113365 37 97.3 34 .............................A....... TCGTGCACTTCGCCGCCCACAACCCCCGGGCGGC 113436 37 97.3 34 .............................A....... GGCGTGCCGGTGCCCCCCTCGCGCGACTGCGTCG 113507 37 97.3 35 .............................A....... GCGGCGATGGCCTGGGCGTCATCGTCGACGGCCGC 113579 37 94.6 33 ..........................C..A....... CACGACGGATGGCGGGCTCAGTGTGGCCATGTG 113649 37 94.6 34 ..........................C..A....... AAGTGGCGCCGGCATCCGTCGCGGGCCGACCTGC 113720 37 94.6 34 ..........................C..A....... CGGTCCCGCTGCACCTCGGGCACGGAACCGTCGC 113791 37 94.6 34 ..........................C..A....... GAGACACGCCTAGCTCGCTGGCTCGGTTGTGGAC 113862 37 94.6 35 ..........................C..A....... AGCGGGGCGGAGAACGCCCAGCGCGCCATCAGGGC 113934 37 97.3 36 .............................A....... GACCATACGCGCGCGTCGGTGCCTGCGGCACAAGCC 114007 37 100.0 34 ..................................... CTTTAGTTCGCGCAACATCGCCCGTAAAAACGGA 114078 37 100.0 34 ..................................... CGTCCCTCGCCGAGTCCTTGCGTACCTTCTCCGT 114149 37 97.3 33 .............................A....... TGCCGCGTCGCGCCGATCGCCAAGACGGCCGGC 114219 37 91.9 0 .................A.A.........A....... | ========== ====== ====== ====== ===================================== ==================================== ================== 66 37 98.4 34 ATTCCAGCCGCTCGATTGAGCGGCTGAGGGTTGAAAC # Left flank : ATCTGCACCGCTGAGGAGGGACGATGCTGATCCTGGTGTCCTATGACGTTTCAACCGAAACACCGGCCGGCCGCCGTCGCCTGCGACGTGTCGCGAAGATCTGCCTGAACTACGGCCAGCGCGTACAGAAATCGGTGTTCGAATGCCAGGTCGATCAAACCCGCTACGAAGCCCTGGAACGCGCCCTGCTCAGGGAAATCGACCTCGGCGAGGACAATCTGAGGCTTTACCGCTTGCGTGAACCACTGGAAAAGAACATCAAAGAATACGGAAAATTCCGCTCCGTCGATTTCGACGGTCCCTTGACGATCTAGACTTCCTCCCGCGAACCCCTAGCGAGGGCGAAAACCCCGCCAAGTTCGCGCGGACACCAACTCTTTCAAAATCAGGAACATATTCTTGTCCACCCTCCTCCCGGCCCTGCACCCCCCTACCACCCCTGACCGGTTCGCGCAAACCAAGCGCCACCTGCCCCACGATCACACACTTGGCGCAATGCC # Right flank : CACCGTCACCTGCTATATGGAGCCCAGATCGATGTATTCCAGCCGCTTGACCGATCCGGCGAGAAATTCTCGGTTCCTCACTCCGAGTCTTCACGGCCAACCACTCTCTGCAACCGATCCCGCCAAAGCACGACAACCACCACCTCACGCCCCATGACCATCACTCCGCGCCGGGCCGGCACGCAGCGCGGTGATGGCCTCGCGTTCGGTGCGGAAGCATTGCCGGCGGCCGAACACGTCGGCGGCGCCGGCGTGTTCGAGCAGCTCCCACACCGGGCGCTTGAGCGCGCACAGGTACAGCGTGACGCCGCGCTCGGCGAGGTTGGCGCGCAGTTGCAGCAGCATGTCGAGGCCGGTGGCGTCGAGGTCGTTGACGGCGCTGCCGACCAGCAGCACGTGCCGCACGCCGGCATGCAGGCGGTCGAGGATGAAGTCCTCGATCAGTGCTGCGGTGACGTAGACGATGGCCGTGTCGGGGCGCACCGCGAGCAGGTCGGGGG # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCAGCCGCTCGATTGAGCGGCTGAGGGTTGAAAC # Alternate repeat : ATTCCAGCCGCTCGATTGAGCGGCTGAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-15.30,-15.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //