Array 1 1-376 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QMCK01000048.1 Enterobacter kobei strain 149H6 149H6_S58_R1__paired__contig_48, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
         1	    16	  57.1	    32	------------................	TCTTCAGGCATGTTGCAAATATGAACGCGATC	
        49	    28	  96.4	    32	..G.........................	AATCACGATAGTCCGGAGTATCGAAACTCTCA	
       109	    28	 100.0	    32	............................	TCTTTAATCCGAGCCTCAAGGACATCGTTTGT	
       169	    28	 100.0	    32	............................	GAAAACCTCCTGCACGGAGGCGCGAAAACAGA	
       229	    28	  92.9	    32	T....T......................	AGTCCGACACTGTGTTTCCGTCTGTTCAGTAC	
       289	    28	 100.0	    32	............................	ACAATCTGAACTCCTTACCTTGTCACAGATGC	
       349	    28	  78.6	     0	.C.T.G...AA.............T...	|                               	
==========	======	======	======	============================	================================	==================
         7	    28	  89.3	    32	GTTCACTGCCGTACAGGCAGCTTAGAAA	                                	       

# Left flank :   |
# Right flank :  AGTCGCGGAATACAACGACGCCATCTATCAATAGTTCACTGCCGTACACGCAGCAACCATATGTAGTTCGGCACAAACACTGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGGCACCGCATCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTACTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGTACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCCGCTACCGGCGTGAAGAATTGCTCC

# Questionable array : NO	 Score: 5.57
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCCCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//


Array 1 272-50 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QMCK01000045.1 Enterobacter kobei strain 149H6 149H6_S58_R1__paired__contig_45, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                              	Insertion/Deletion
==========	======	======	======	============================	=============================================	==================
       271	    28	 100.0	    33	............................	TGTTCCGACACTGCGTTACCCGTCAGCTGCGCC            	
       210	    28	  67.9	    45	...................NNNNNNNNN	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	
       137	    28	 100.0	    32	............................	TGCAAAAATCCGCCACGTAATCAAGACTCGAC             	
        77	    28	 100.0	     0	............................	|                                            	
==========	======	======	======	============================	=============================================	==================
         4	    28	  92.0	    37	GTTCACTGCCGTACAGGCAGCTTAGAAA	                                             	       

# Left flank :   ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTGCCGGGGTTTATCGCTTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTTATGGTAGGAATGGGTGAAACGCTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGTGCTCTGGTATGAAGGAAGGGGTCTATAGACCCTTTTTTATTGGCTGTTTTTAACTTATTGATTTTATTGTGCTGAAATGTATGTGAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAACGTGATAGGTGTAGATTGTTCCA
# Right flank :  AGTTGGCAGTGGGTTCACTCTCACAACGCCTGAGTTCACTGCCGTACAGG

# Questionable array : NO	 Score: 5.46
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [35.0-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,5.51   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//