Array 1 283-830 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTY010000011.1 Alicyclobacillus sp. FSL-W10-0059 NODE_11_length_95449_cov_54.123031, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================= ================== 283 32 100.0 39 ................................ ATATCCTGGGTCTTGGCGAACCCAGGCAAGGAAGGTTGA 354 32 100.0 45 ................................ GCTACTGTCATGGAGTCATCTACTGTCCATATCCCACATCGTTGA 431 32 100.0 44 ................................ TTGCTCCTCCGATTCTCCTCCGCGCTCCTTGACAGCAGTGTTGA 507 32 93.8 43 ......................TT........ AGGCTCCGCGGTGTCCGCCCATCAGGTGGAATGGGGCGGTTGT 582 32 96.9 41 ............A................... AAGTCGTGATTGAACCTGTCGTCACGCAATATCCCGGTTGT 655 32 100.0 41 ................................ AAGTCGTGATTGAACCTGTCGTCACGCAATATCCCGGTTGT 728 32 96.9 39 .......G........................ GCGTTCATTGGCCGCTCCCATCCGGTAGTATTCCGTTGT 799 32 90.6 0 ..........G................T.C.. | ========== ====== ====== ====== ================================ ============================================= ================== 8 32 97.3 42 TCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Left flank : GTACCGCGAAGCGACGACGCACCACCACAAACGTGGATTAGTTCTTACGGCCCGGAAATTCGTGCGACTGGTCTATGCGCTGCTGAGCAAAGGCCAAATCTACGACGAAAGGCGGGCGACAGGCTAAGCGCTGACTCCTTAACCGACATCCTGGAACATTCGCTACCAAGAGGATGAAAATTCCAATCATCCTCCGTAGGGGGGCTTGCTTTGTCTCAAGTTGAACTTACACGAATTTCATTCGTCACCCCCTTGACATTTCACCGCAGGTCTTATCGTTGAT # Right flank : CTTATTTCTTGGGAATGTGGGCGTCCACACGATGCTTGGGAGGCAGAGTGATGGAAACGTCGAAGGGTTTTCAGAGTTCACGAAGCCAAATCCACCAGAGCCCGTGAAATATTTGGATTTCATTGACAAGTGTCGGTGGGCTCCCGCTCTGTCGGTTTTCGCGTACGTCGGGGCGCAGTCTGTCCCATGAGTGCGTCAGCACAAGACTCTGAATGGGGTTCTGTTCTGGATCATGGCATCTGTCCTCGCCATTCTGATAATCGGTGTTCTGTATGCGTTTGTCCGCTATCTCATTGCATATTTCAGATGCACACGGTGAGTGCCACACACGCCGTGTTGAAGTGAGAACGGGACACGAAGTCCTGATCGAGCCACCGTGCATACGACGGCCACCTTCAGGCTGCGCCATGAAGCGCACCTTCGGGTGGCCGTTTGACTAGTTCCTAACTGAACCCAAATTCATTGGACCCGTTCAAGAGCCCCCGTCGCCTACCGGCTGG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 1612-108 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTY010000030.1 Alicyclobacillus sp. FSL-W10-0059 NODE_30_length_21195_cov_53.534319, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1611 36 100.0 36 .................................... CTCAATGTCTGGACAGTCCTCAAACAGCCTCTCAAT 1539 36 100.0 38 .................................... CTGAGGAGGGGACGGAAAGTGACCGGGCGCGTGTTGAA 1465 36 100.0 36 .................................... CCAGACTAATACGGATGATTTAGATCTCTCCGTTCT 1393 36 100.0 40 .................................... CGTAGACCCAAGCGTCGGGTAGAAACACGAGTACACGCGC 1317 36 100.0 37 .................................... CTTGCCTGACGGACGTAGATATCCTCGTCACGATGAC 1244 36 100.0 37 .................................... CAATATCTGTTTTTAGGTAAAGCGTATATCGACCGTC 1171 36 100.0 37 .................................... CTTTCCATTTTACGCCAGTCTCATCACGGCTGGCCAG 1098 36 100.0 37 .................................... CTTAAATATGGAATCAAAAGCGTACCGAAATGGTGAC 1025 36 100.0 39 .................................... CATCCTGCTCCATCACTTCAAAATCATCTGCCATGTTCG 950 36 100.0 36 .................................... CCTTTCCAAAGCCTCTTTCGGAATGGAGCCGAGCTT 878 36 100.0 37 .................................... CAATCTCGCTAATGGCTTTGTTTAGGTTAGCTGTGTC 805 36 100.0 39 .................................... CCTCTTCTCGAATCGTCCTCTTCATCGTCTGCCTCCTCC 730 36 100.0 37 .................................... CGACACCACTTCGGACTTTCCGTGTCGAGGCGGCATC 657 36 100.0 38 .................................... CGATTTTAAGCCTATTTTATTCCTTGGAGGTATTACCC 583 36 100.0 36 .................................... CCAACTCATACCATTCATCTAACCCTGTCTTTTCTT 511 36 100.0 39 .................................... GGGTTTGTTCGTCCTATTGTCCAATACACAGTTGATAAT 436 36 100.0 38 .................................... GTCATTAACGACAAGAGCACATACAATCTAGAATTGAT 362 36 100.0 36 .................................... GGTAAGATATACGATCCGTCATTTGCTGATCGTCGC 290 36 100.0 37 .................................... GGGGCATCGGAGTCAAATGCTCGTCGGTACAATCTCG 217 36 100.0 38 .................................... GGCGACGTCTCCTACTCAGCCGATCTGTCGCTAGCTAC 143 36 97.2 0 .T.................................. | ========== ====== ====== ====== ==================================== ======================================== ================== 21 36 99.9 37 GCTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAG # Left flank : CGGGTGGACTGTCGTCCACGACGGCGCTCACGGGATCCACGGAGGAGGAGCAGTTCGTCGAGGCGTAATGCGATTGGGTTGACGATCCGACGACGCTCGCAACGCTGGCGCTCTGCGAAGTGGTTTGAACTCGGCATGGCACTCCACTGGGGCCCCGACGGGGCCCGCATTTTTTTTGCATGAACGGATGGGGCGTGGGGCGAGATAAAGGCGGAGGAAACGATGAGGCAGGTCGGCGCGATGCGCGAACAAGCGAAGGTCGGAGTCATGCGATGGAGACGGTGGGACTGGTGACGGACGGGGGACCGCGTGCGCGAACCGGAATCGATGGCGAAAAGCCGGGGGGTTCGCGGAAATGGAGAATTGCGCGCCAAGACTGGATTTTTTCGAGAAACGGGGGTATGATGAGGGCAGTTGAACGCCGCGCGAAGCGCGGGTTCGGAAGAGGTTCGCGTTTTTCGCCCGAAAAGCCGCGTCAGACGTGGCCTCAGGAAGGAAGC # Right flank : GGGCGACGTCTCCTACCGTGAAAATGGCAAAAAAGGAACCCGGACCTTCCCTTCGTCAATCATGGAATATCGTGGATATTCTTTCAGGAGGCTTCCTCTGCGACGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 130-2663 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTY010000033.1 Alicyclobacillus sp. FSL-W10-0059 NODE_33_length_17051_cov_45.462718, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 130 37 97.3 37 ................................T.... TGGTGGGGTTCGAGTAGAAGGGAGTAGATGAACGTGC 204 37 97.3 37 ................................T.... CAACATAATCCGACAGCAGAGGAGAGATGCAAGAGAC 278 37 100.0 35 ..................................... GAGCTTGTCGAGCGCTTCCGGAGGAATCTGTGTAT 350 37 100.0 36 ..................................... GTCTGCGTCAGTCTAAATGAAAACAGCCCCCATCCC 423 37 100.0 35 ..................................... GGTGTCCAGCCAGATAACCTGACTACGCAACAGGT 495 37 100.0 36 ..................................... GGTCAAGCTCGGCGCGCTGCTCGACATTCACGAGGC 568 37 100.0 35 ..................................... ACAGCATTGCCGGAAAGCGTAAAGCCTCCCAGGAC 640 37 100.0 36 ..................................... AAGACGAATCATACCAATTCGAACCAATGATAGGCG 713 37 100.0 35 ..................................... GGAGTGGTGTTATACGTTGGTCTGCCAGGAAAAGG 785 37 100.0 36 ..................................... GAGAGCGACGCATCAGACGCCAAGAGACTCGCAACT 858 37 100.0 37 ..................................... TCTGCACGTCTCTGAGCCGACGGTGCGCCGGCTGATT 932 37 100.0 36 ..................................... GCGGCTCGAACTTCACGTGCCTTGCACCTCCTCGAT 1005 37 100.0 35 ..................................... GATCCTTGGGCTCTCATGGCATCACGCACGGCGTC 1077 37 100.0 36 ..................................... TTGTACTATTTTCAGATCCCACGCATATCTTATTAG 1150 37 100.0 40 ..................................... GCAGATGGACTTCTCGGCGGCGGTTAAGCAGTGGCTGGCA 1227 37 100.0 34 ..................................... GCCACGGCATCGGGATACGGATCATGCGGTTGCC 1298 37 100.0 36 ..................................... GGTGCGTGACCTCGGAAGGGAGTTCGCGCACTTGGC 1371 37 100.0 35 ..................................... CAGCACACCGACGGTCACTCCACCGTCCGACGGCA 1443 37 100.0 37 ..................................... CCCGGAAAGGTTTATGAAGAGGTTCAGAGACGAATTC 1517 37 100.0 37 ..................................... CCGACGGGGGCTCTTCGGGTAGTCGATGTCAGTGTAG 1591 37 100.0 41 ..................................... GGGTTCATGAGTGCCTCGTCCGGGTGAAGATAGGCCGGAAG 1669 37 100.0 36 ..................................... AAGTACGAGCACATGCTGCTCGGGTTGCCGTCGGCC 1742 37 100.0 37 ..................................... CGGCGCTCCTCGCTCCTGATGAATCTTACCGGTAAAT 1816 37 100.0 36 ..................................... TCGGAACGTGTCCGTGATCTGGCTCATCAGGCCGGA 1889 37 100.0 39 ..................................... GCCCCGCAGCATCGCCTCCATGCTCTCTGCCAGCCGCAG 1965 37 100.0 37 ..................................... GGTGTACGCTACGCGACGCTTACTTGGAGGTGCAGTG 2039 37 100.0 35 ..................................... GTCAATGCACCAGTAGCCTGACTCGCCACCGATCC 2111 37 100.0 35 ..................................... TATTCACCGATGAGCAGTTGGCAATGTTCGCAAAG 2183 37 100.0 38 ..................................... GAATTCGAGCGAATGGCCGTGAGCGGAGCCTGAGCCAT 2258 37 100.0 40 ..................................... ATACGCATCCATGATAGCCTTCATTGTACATGCTCCCCTC 2335 37 100.0 37 ..................................... TATAAGCGCGCCTCTGGGCTCGTCAGCGAATAAGCTG 2409 37 100.0 35 ..................................... TTTTTGCGATGGCACGAACGGTCATCTGAGCCGAC 2481 37 100.0 35 ..................................... GATAAACGCCTTGAGCGAGGGATACCACTCGGGCC 2553 37 100.0 37 ..................................... CGGTACTCCCCTCCCCGGGTCCGCGCCAGCACGTCGC 2627 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 35 37 99.8 36 GCTTCAATGGGGCCGCCGACGATCTCGGCGGAACAAC # Left flank : ACGCTTAAGGTCATTGTCTCTGGGGATACCCCAGCAACTCAACCCTGAGCTTGGCGTGTGTGTTCATGAAGAACTGACTCTAAACCATTTCATACGAGGGGACGAGGACATGCAAGCGAATAAGGTCATG # Right flank : CGCTTCCTTCCTGAGGCCACGTCTGGCGCGGCTTTTCGGGCCAAAAACGCGAACCTCTCCCAAACCCGCGTTTTGCACGGCGTTCAACTGCCCTCATCATACCCCTGTTTCTCGAAAAAATCCAGTCTTGGCGCGCAATTTTCCATTTCCGCGAACCTCCCGGCTTTTGGCCATCGATTCCGGTTCGCGGACGTGGTGACTCGCACAGAGACTCGTACAGAATTGTAGAAGGATTTCAGATCTGTTGCGCGAATTCGTGTCTTCATCCCGGGAAGGTGGCCTCGCGTCCCTCTGGCCCTCCGCAACCGCGCGGCAAAGGGCGTCGTTGAGGCGCCGGAAGACGTGCAGCCCGAGATGTTTCGCCTTCCTGACCTTCTGGGGCGCGATCGCTCGGCAGGTCGCACGCCTCCAGACTTACCTTTCTCATGTGGGAGGTCCGCCCAATGGTCCTGATTGGTGTACTCGTCGTCATCGTGGGGTTTGCCCTTCGCGTGAACCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGGGGCCGCCGACGATCTCGGCGGAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 151594-149351 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTY010000003.1 Alicyclobacillus sp. FSL-W10-0059 NODE_3_length_167166_cov_50.645729, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 151593 37 100.0 35 ..................................... ATCGCGTCACTGCCCCGTCCGCTGGTCGTCTTTAC 151521 37 100.0 35 ..................................... TTCGACAGAGGTTTCCCTCTGAAGGACCAGTGTTT 151449 37 100.0 42 ..................................... CGGGTGACGTAGCCACCCATAGATCGTAGTTCGGCTGGAGGG 151370 37 100.0 37 ..................................... CGGTCCCGAACGTTGATGAGCCATTGGAGTGCGACAC 151296 37 100.0 35 ..................................... TACGTTGACCACATGCCAATGTATTCCTATCTAAA 151224 37 100.0 37 ..................................... CGGCGGCGGTAGTTCTTCCACGATTTGGACGCGTGGA 151150 37 100.0 36 ..................................... GCTGAACGGGATGTGATGCAAAGTCGGCGCGATAGC 151077 37 100.0 36 ..................................... TGGCTATCGCTCAACGCCATCCGTCGTTCAAAGGCC 151004 37 100.0 37 ..................................... ACGAGACGCGGGAGAAAGCGCTGAACATCGCGCTGAA 150930 37 100.0 37 ..................................... AGGAATTTCTTCGACGTCATAAACAAGCAGCCATCAC 150856 37 100.0 35 ..................................... CCCAGAGTTCGATATACAGTCGCTCAATGTACCGA 150784 37 100.0 37 ..................................... TGCCCATAATATCGAGCATTTTCAACGTCATCCGGAT 150710 37 100.0 39 ..................................... GTCCGAGAGTCGAGGGCCTGCAGTGGACGCGCGCTGATG 150634 37 100.0 40 ..................................... CGTTCGCATTTTTCCGACAAAGGGCGACAAATATGACAAA 150557 37 100.0 37 ..................................... CACCCGCTTCAGAAATCTGGTGTAAGTCCGAGGAAAA 150483 37 100.0 37 ..................................... TAGTAGCCTTGGTAGAAATAGGATTGTCCATTCACGG 150409 37 100.0 35 ..................................... CGCTGCCCCTGCTTGAGCAACAAGGGTGGAAACGA 150337 37 100.0 33 ..................................... CTCGCCTTCGAGGTAGGCCCGGAGCACGTTCAG 150267 37 100.0 40 ..................................... TCGCACGAGAGACTCCGGCAGGCTGGCATACCTGGGGAAA 150190 37 100.0 35 ..................................... TCAACCGCCTCGCGGATGTCGACTATCCGACCTCC 150118 37 100.0 37 ..................................... TTGATCGCTTCGTGCAGGTCCCCGCCGTGCGCCACGT 150044 37 100.0 35 ..................................... AATGGAATATACATGGAAAAGGCCGCCCGAGGGCG 149972 37 100.0 36 ..................................... TGTTTCTCAGCAGGGCAAGGCTGTTGCCTTCGTCCG 149899 37 100.0 35 ..................................... CGCGACGGCCATGGGTTATTTGACGCCCATCCTAC 149827 37 100.0 35 ..................................... TCAACCGCCTCGCGGATGTCGACTATCCGACCTCC 149755 37 100.0 37 ..................................... TAGAGGCCGGGGAGTTGCAAGTTGGTAGCAATCCTGC 149681 37 100.0 35 ..................................... CCAAGGCCGCAATGGACGCCCGCAATCCATGCACC 149609 37 100.0 34 ..................................... TACCAACATACTATCATCCTCCCATTGAATTGAA 149538 37 100.0 39 ..................................... ATGTAAAGCTCCAATTGTGCGATTGTCCACGTTGCACGC 149462 37 100.0 38 ..................................... AAGCGGTGGGTCACGCATGAGGTTTTGCCCTCCATTCG 149387 37 94.6 0 ...............C..............C...... | ========== ====== ====== ====== ===================================== ========================================== ================== 31 37 99.8 37 CTTGTTCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Left flank : AATGAGCCAATCGTCCTCCACGCCCGATTCCTCCCTTTGGCATTCCATTCCTTCTGCGTCGAGGTGCGCGGGCGACCCGCGCAGGACGCCGTAATTTTAGAGCGGAAGCGAGCCCGCTCAACCCTCGCGACGCTTGCAAGAATGGTGATAGAATCAGCATGGCCCATCGCGCAGGGCTCTATACGGCTTTCTGAGAAGCTTCGTGAGCGACGGAGAATGGGGCAAGACATCGAGCAGAAGCTAATGGTTGCTCGGCGATGAAGCGCCGAATTGACGTGCCTGCGACTTTCATGCCGAGATGGGTATGCGTTGCGCGAACCTCAATCGATGGCGAAAGTGCGGGGGGTTCGCGAAAACCGAAAATTGCGCGCCAGGACTGGATTTTTGCGCTCGCGGAGGTTATGATGAGAGCAGTTGCGAGGGGTTCAGAGCGCGGGTCAGGGATAGGTTCGCGTTTTTCGCCCGGAAAGCCGCGTCTGGCGCGGCCTCAGGAAAGAAGC # Right flank : GATGGCCAACAATACCATCCGTACCCCATAGGACGGGAGTTGATCCACCGAGACGTTGGCGCATTGAAGTGTCCGCTGGCATCCTTGGCAATCTCACGAAGTCCACCGCCCGGCGCCCCAGCCCCATCTAAAAAGGCCGCTCCGCATCGGAACGGCCTTTCTATGCAAACCCATCTCACCGATAGACGTCTCCCCCGCCGGCCCGAAACGCCTCCGCCTTCTCGCGCATGCCTTCGGCAATCACCTCCTCAAGCGCCAGCCCGTGCTCTTGTGCGTACGCGCGTATGTCCTGCGTGATCCGCATGCTGCAGAACTTCGGCCCGCACATGGAGCAGAAGTGCGCGGTCTTCGCAGGCTCCGCCGGCAGCGTTTCGTCGTGAAAGCTTTCGGCCCTGACGGGATCGAGCGCCAGGTGGAATTGGTCGCGCCAGCGGAATTCAAAGCGCGCCTTCGACAGCGCATCGTCCCACTGCTGCGCTCGCGGGTGGCCCTTGGCCACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGTTCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 9800-8146 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMTY010000041.1 Alicyclobacillus sp. FSL-W10-0059 NODE_41_length_9938_cov_53.970424, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 9799 36 100.0 38 .................................... GTTTGCTTCCCACTCTGGATCGCGGAATAGTGGGATAC 9725 36 100.0 38 .................................... GGTTGCGCACCACAACCTGGTCAATATGCAAGAGCGGC 9651 36 100.0 38 .................................... GGACAGCGCTACAATGTGACGCGGACGGGCGTCACGCG 9577 36 100.0 37 .................................... GACCTTGACCGGTAGACTTGTGATGGAGAATGTCCTG 9504 36 100.0 36 .................................... GAACACCCCAGACGCAAGCCTGGGCCAAACAGCGCC 9432 36 100.0 35 .................................... GCTCATTTCGACGCCTCCTTAGTCCTGCATCACAT 9361 36 100.0 37 .................................... GCGGTTCTGTTCCGGTTTTATTCCGGTTCAAATCGCC 9288 36 100.0 35 .................................... GACGTCCGGCGTGTGGGGCCATGAGGCGCAGGGCG 9217 36 100.0 38 .................................... GGACGTTGTGCTGCTGGCGCTCATCGGCCTCTTGGTGG 9143 36 100.0 39 .................................... GGGTGGATGTGTGCGGAGGTATTGAGATGTTGGATTGGC 9068 36 100.0 37 .................................... GGGTTCGTTTGGTTTCGGTTCGCAGCTTTATTTCGCA 8995 36 100.0 38 .................................... GCGGGAGCGGCATGTCCGTGAGATTGATTATTGGATGG 8921 36 100.0 37 .................................... GCGGCCCGCCTTGACATGGGACCCCCTGGCCCCCCTG 8848 36 100.0 39 .................................... GGTTTGCGTCTGATGGTTCGTCTCAATTGGGTGACCTCA 8773 36 100.0 41 .................................... GCTTGAACGACATCTTGTTGTATATGAAGAGGAATCGAATT 8696 36 100.0 36 .................................... GAACAGTTCCCGGATCCGTGGGCAGGCATTGACGAG 8624 36 100.0 40 .................................... CACCAGGGAGGCACCCCCTGCTAGGCTTGCCCGAGCCCTC 8548 36 97.2 36 ....T............................... CAAGGATAGCAGAATCCCCTAAACCCCATTGCCCAT 8476 36 97.2 40 ....T............................... CAACACATCGCCGGTTACGTCCAACGCCTGTAGGAACTGA 8400 36 94.4 36 ....T.............A................. CGTCAAACTGTTCCTGTCGATGATCACGAGAAGGTT 8328 36 94.4 37 ....T.............A................. CCGTCATTGGCCCGCCACCTTCACCCAGCGCAGCACT 8255 36 97.2 38 ....T............................... CTCTGGCGCGTATATCCATATCGCAGATCGAACGCGCT 8181 36 91.7 0 ....T...............C.............C. | ========== ====== ====== ====== ==================================== ========================================= ================== 23 36 98.8 38 GTTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAG # Left flank : GAGGGATCGAGCTCTGGTGGTTGCTTATCACCATCGTAGCGCGCAACATCGCCATTTTCATGATCCCGTGGCGTCGAAAATCGACATGAGGGTCTACTCAGCCGATCTGTCGCTACTCAGCCGATCTGTCGCTAGCTA # Right flank : GAGGCTTATATCTTCCGAAAGTCACCCCGTAAGCCAAGCCAACACCCGACGGCCACGACGGCCATGCCGATCAGGGCAATGGTTTCCGAAGGACTGAGCCATCTATCCAACATGCCACCGAGCCACGAACCGAGCGGCGGGCCAAGTGCAATCAGGGAGCCCCGTAGGCCCATGATGCGTCCCATGACCTGCGTCGGCACAGAGCGCTGGACGACGGTCCGCGCCAGCGGTGGATATCCGCCAAACAGGAGTCCGGCGCAGGCGAGGGACACGTAGGTGAGTGTGAAGGCGTGGATCCAGAACAGCGGGGCGAACGCCGCGCCCCATCCGATGATCATCAACGCCATGACTGCGCCGGTCTTGCCTCTTTTGGGGATCGAGCCGCTTAACGCCGCCCCAACAATCGAGCTCATGGCATAGGCGGTCCAAAGGCTGCCTAGGATCCAGGCGCCTCGGCCAAACTGCCGGTGTGTCAGGAGGGGCAACTCGATGTCAAGCGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //