Array 1 255794-255343 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIGG010000006.1 Rhodobium orientis strain DSM 11290 Ga0394283_06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 255793 37 100.0 32 ..................................... GTGAGTGCCGCCGCGAGGGAGGCGGTAGTGAT 255724 37 100.0 32 ..................................... GGAGGGCCGTGGTCAGCAGGCCGAGGTGGTGG 255655 37 100.0 34 ..................................... CAGCGGCCTGCCAGTTGCCGTACTTGAAGTACAC 255584 37 100.0 31 ..................................... GCGGAAAACTGGTTGTAGAGCTCCTCGACGA 255516 37 100.0 30 ..................................... AAACACGTGACACCGACGGTGGTGTTGTGC 255449 37 100.0 33 ..................................... TCCGCGCCGCAGCCGGGACGTCGGCTTTCGGCG 255379 37 78.4 0 ...G..C...T.........T.........A...GGG | ========== ====== ====== ====== ===================================== ================================== ================== 7 37 96.9 32 GTCAGCTGACCCCCCAGCCACCGGCTGGGATAGAAAC # Left flank : GCATGAGGACGGTGGCGACGGACGTCTGGATGATACGATCGACCACGGAGGATATCGTCAGCCGCCGAAACCCTCCGGAGCGTTTTGGAATGTCGACGTGACGCATCGGCCTTGGGTGATAAAGCCCCTCGCGCAGATCATTGGCGAGTGTGCCGATCCGTGCCTCCGCGCGAGCCGAAAAATCGTAGACGGTCATCCGGTCGCCGCCGGCGGCGCCGGCATTCTGCCACACCTTGGCCCAGGCCGCCCGCAACGCCGAACGTCGGCAGGCGGCATCGAACGCCTTTTTGTCATCGACGAGAACCCGCCGGGGCCCCTTGGTTCGCCTTGATTGAGCCATTTTGCTTTGGATATTATAAATTACATTGTAGAATAAGTAACATACAGGAAAGAGCTGCACAATTGTTTATGTTTTGTTCTATTTTTATTTCACTTGAATCCTCTTGCCTTGGAATTTGGCTTCGTTTCTTATTGTTCTGCAATGTGATATCGAGGGGTAA # Right flank : AGAGACCGGTCGCGAAGCGAGCCGGCGAGCCGTTGGCAGACCTCAAGCGCCGGGGGCTGCTGAAGACAGTGCTCCGTGCTGAGGCGGGATTTCAGTGGGGGCGTTTGCGAGCGATAACGACGGGCGCATTACCCTGTCGTCCCTATTTCAGCTCGGCCGATTGCGGTTCGAACTCATTACGGCGTGTTCAAAAGCGATCGCGCGTTCGAAATCGACGATAATCGTCTTCTCAGCACGCGACACCGACACCCAGTTCGTTTCTTCCTCTTCCGCTGCATCGATGGTCGGAAGCACGATCCAATAGGCTCCGGACGACAACGATTTGACGAACTTCCACCGTTCGAAGGCGCTGTCGAGAAAGCGCTCGACTTCCTGCCAGAACATTTCTTGAGCATGTTCTTCGCCGCGATGGTCACGCATCAAGAGCTTCCAGCCCTCATACTGCGTTCGACGCCGCTTCTCCCGCGCAGTTTGCTGCAAGTTCATCACCGTTCCGACAA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGCTGACCCCCCAGCCACCGGCTGGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.70,-13.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 257976-256731 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIGG010000006.1 Rhodobium orientis strain DSM 11290 Ga0394283_06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 257975 37 100.0 34 ..................................... TGGGAACGGGTATTTTCGGCGGGCGCGGTGTGGA 257904 37 100.0 34 ..................................... GTCACCGTGCGGACGAGCGACTCCTTCACGGAGA 257833 37 100.0 36 ..................................... CAGGCACTTCCTCCTTGGGCGCATCCTCCTCGCCGA 257760 37 100.0 32 ..................................... CTCTGCTTTTCCAGCCCTCGTCAGAAGGTGGC 257691 37 100.0 31 ..................................... GCGCTCCTCGAACGCCGCTTTCGCCTTCCTC 257623 37 100.0 32 ..................................... GAGGAGTAGCTACTCCTCGGCGCAGGGTATCC 257554 37 100.0 39 ..................................... CCCATCTCAAGTTCCTGCACCCGATCATCCGCGAAGATG 257478 37 100.0 37 ..................................... CCACTCGTCCAGAGGAGATGCCCGGATGTGCCTGCTG 257404 37 100.0 37 ..................................... CCCCCTGCCAAGAGGTCTCAATGAGGGTATCGGCGGC 257330 37 100.0 34 ..................................... ACGGCACCTTGAAGCCGAGCCCCGGTTCGACGAC 257259 37 100.0 31 ..................................... TCCTGAGCCGTCTGTGAGAGAGTTCCCTGCA 257191 37 100.0 31 ..................................... GCTTGACCTCGTCATCCTCGTCGCCGATGAC 257123 37 100.0 32 ..................................... TGAAACGCCTTATCCGCATGCCCAGCGCAGTA 257054 36 86.5 28 ....A.T.G.-...................C...... TCTAGCCAGCCCAGCCACAAGGCGATCA 256990 37 78.4 33 .GA....AG..G...CC...C................ GTCGATAATTTCGACAGTGGTGCAGAAGTACAC 256920 37 86.5 46 .G....T...C.........C...............A TCGCGCAGGGCAGCGCACTTGGTCAGAATAACCTGCGCGACCTGGA 256837 37 94.6 33 ...G.............T................... TGAAACAGGTCGCCCATGGAGTTGACGAAGATG 256767 37 83.8 0 ..T...T.......................A...GGG | ========== ====== ====== ====== ===================================== ============================================== ================== 18 37 96.1 34 GTCAGCCGACTCCCCAGCCATCGGCTGGGATAGAAAC # Left flank : ATAAGGACGGTGGCGACGGACGTCTGGATGATGCGGTCGACCACCGAGGGGATCGTCAGTCGCCGCACCCCGCCGGAGCGTTTTGGAATGTCGACCTGGCGCATCGCCCTTGGGTGATAAAGCCCCTCGCGCAGATCATTGGCGAGTGTGCCGATCCGCGCCTCCGCGCGAGCCGAAAAATCGTAGACGGTCATCCGGTCGCCGCCGGCGGCGCCGGCATTCTGCCACACCTTGGCCCAGGCCGCCCGCAACGCCGAACGTCGGCAGGCGGCATCGAACGCCTTTTTGTCATCGACGAGAACCCGCCGGGGCCCCTTGGTTCGCCTTGATTGAGCCATTTTGCTTTGGATAATATGGAAATCATTTTATTCTACAATATATTGATGAATAAATGAAGGGGATTTATTCTTATTTTGTTCCAGATTCGAGAGAGCAAAATCCAGTTGCCTTGGATTTTGTCGCTATTTCATCTTGTTCTGCAATGTGATATGGAGTGGGGT # Right flank : AGAGACCGGTCGCGAAGCGAGCCGGCAAGCCGTTGGCAGATGTCAAACGCCCGGGAATACTGTTGAAGACAGCGCTCTTCGCTGAGGCGTATATTTCAGTGGGGGCGTTTGCGAGCGATAACGACGGGCGCATGGCCCTGTCGTCCCTATTTCAGCTCGGCCGATTGCGGTTCGAACTCATTACGGCGTGTTCAAAAGCGATCGCGCGTTCGAAATCGACGATAATCGTCTTCTCAGCACGCGACACCGACACCCAGTTCGTTTCTTCCTCTTCCGCTGCATCGATGGTCGGAAGCACGATCCAATAGGCTCCGGATGACAGCGATTTGACGAACTTCAACCGTTCGAAAGCGCTGTCGAGAAAGCGCTTGACTTCCTGCCAGAGCATTTCTTGCACGTGTTCTTCGCCGCGATGGCCACCTCCTCTTCGAAGAACGGCATGAGGACGGTGGCGACGGACGTCTGGATGATACGATCGACCACGGAGGATATCGTCAGCC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGCCGACTCCCCAGCCATCGGCTGGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.60,-13.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [32-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //