Array 1 793005-793650 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AP019846.1 Leptotrichia hongkongensis strain JMUB5056 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	=====================================	===============================	==================
    793005	    37	  97.3	    31	G....................................	TACCTGTTCTTGTATACTCCTGCAATATTTC	
    793073	    37	 100.0	    31	.....................................	CTCAATACCTGTATATTGAGTATTTTTTAAC	
    793141	    37	 100.0	    31	.....................................	TTTTACAGGTCTTACAACAGTATTTCCTACA	
    793209	    37	 100.0	    30	.....................................	CTTATTATATAGAAATAGATGTAACTATTA 	
    793276	    37	 100.0	    30	.....................................	TAAATATGTGTTAAAAATTGAAACTGATAA 	
    793343	    37	 100.0	    30	.....................................	AGATTTTTTGACTGGGTGGTTGAATCGTGT 	
    793410	    37	 100.0	    31	.....................................	GGAAAAGCAGTAAATAAACCAATAGATGATT	
    793478	    37	 100.0	    31	.....................................	CCATACTTCAAATACTTCTGTCAATACTTTT	
    793546	    37	  97.3	    31	...............C.....................	TCTCGTTATTTATTGCCTTTGCAAGAAGTTC	
    793614	    37	  81.1	     0	...............C....A.A....AA.T.....A	|                              	
==========	======	======	======	=====================================	===============================	==================
        10	    37	  97.6	    31	TGATATAGACTACCCTAATATCGAAGGGGACTAAAAC	                               	       

# Left flank :   ACAGCCAACAGAGCAAGAATTAAAAGATATGGAACTTGGAATGAAAGTCGTAAAACACGTAAAATCAAATGCAATTGTGGTCGTAAAAGATGGAGCGGCAACAGGAGTTGGAACAGGACAGACAAACAGAATCTGGGCAACTCAGCACGCACTTGAACATGCCAAAGGAGACTTAGAATCACTGGAAGGAGCAATTTTGGCATCAGACGCATTTTTCCCATTCAGAGACTGTGTAGACGAAGCTGCAAAATACGGTATCAAAGCATTAGTACAGCCAGGTGGCTCAATTAGAGATAAAGAGTCAATCGAAGCTGCCGATGAACACGGAATGACAATGGTATTTACTGGCATCAGACACTTCAAACATTAAAATTAAACAAATATTTGTTTTTATAGATAAACTGTGTTAAAATGTATAAAAATGGGTAATCTATATCAAAATTTAAGAATAGAGGAACAATATAAAATTTAAAAAATAACATTATTCCAATTATATGATG
# Right flank :  AATATGTATAAGGAGTTATAAACCCTTTATTCTTACCGTTTTATTTTTCCTTACCAAATTTAACTGTAGATTCTAGTATGATTATTTTAATTTCAATTTGTTGTTTTATATTTTTATATAAAGTTAAAGCAAAAATTTTAAAGTGTTTTATAAATAACTTTTGAACTCAACAGTTGGATAAGAGAAATAAAAGAACAAATTTTAGATGAGTAATATGAAGCGAACCATTCATAAATCACAGAAAGGAGAAAACAACTTTTGAAAAAAATCTTATTTTTTTTATTTTTATCCAGTTTATGCTTTTCAAATACCTGCAACTGGGTAAGTGAACCCAATCAAACTTTAAAGAAATACATTGGTGTAATTAAAAAGCATAACCTTATCAGCAAAGTTTACTGTGATAATAACGACACTTTAATGGCTTACTGGCGAAGTAACGATGAAAATGATATTGACATAGGATTAATGCTTAATGACATTAATGCTAAATCGCTGAGTCT

# Questionable array : NO	 Score: 3.14
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TGATATAGACTACCCTAATATCGAAGGGGACTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:62.16%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-5.30,-5.10] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [83.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//